FN2345 Chr1 23981515 23981516 0 0 Deletion 1 frameshift_variant HET LOC_Os01g42294 inactive receptor kinase At2g26730 precursor, putative, expressed FN2345 Chr1 26532041 26532042 0 0 Insertion 1 Homo FN2345 Chr1 28455152 28455164 0 0 Deletion 12 Homo FN2345 Chr1 30003098 30003205 0 0 Inversion 0 FN2345 Chr1 7322380 T-A 0 0 Single Base Substitution 0 Homo FN2345 Chr1 7322751 7322760 0 0 Deletion 9 Homo FN2345 Chr10 21386268 21386276 0 0 Deletion 8 HET FN2345 Chr10 2310555 2310564 0 0 Deletion 9 Homo FN2345 Chr11 16894455 A-G 0 0 Single Base Substitution 0 Homo FN2345 Chr11 17542950 C-A 0 0 Single Base Substitution 0 STOP_GAINED Homo LOC_Os11g30170 transposon protein, putative, unclassified, expressed FN2345 Chr11 17681036 17681042 0 0 Deletion 6 Homo FN2345 Chr11 17900283 17900286 0 0 Deletion 3 Homo FN2345 Chr11 23889653 G-A 0 0 Single Base Substitution 0 Homo FN2345 Chr11 3102601 G-C 0 0 Single Base Substitution 0 Homo FN2345 Chr11 8101770 8102021 0 0 Deletion 251 exon_loss_variant&splice_acceptor_variant&splice_donor_variant&splice_region_variant&intron_variant HET LOC_Os11g14430 APOBEC1 complementation factor, putative, expressed FN2345 Chr12 17628259 17628285 0 0 Deletion 26 Homo FN2345 Chr12 22455976 A-G 0 0 Single Base Substitution 0 HET FN2345 Chr12 2958530 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os12g06230 retrotransposon protein, putative, unclassified, expressed FN2345 Chr2 11127983 T-A 0 0 Single Base Substitution 0 HET FN2345 Chr2 11127995 11127997 0 0 Deletion 2 HET FN2345 Chr2 3399332 3399334 0 0 Deletion 2 HET FN2345 Chr3 11677861 11899512 0 0 Inversion 0 FN2345 Chr3 11680001 11700000 0 0 Deletion 19999 LOC_Os03g20640 expressed protein FN2345 Chr3 11680001 11700000 0 0 Deletion 19999 LOC_Os03g20650 bZIP transcription factor domain containing protein, expressed FN2345 Chr3 11680001 11700000 0 0 Deletion 19999 LOC_Os03g20660 retrotransposon protein, putative, Ty3-gypsy subclass FN2345 Chr3 11680001 11700000 0 0 Deletion 19999 LOC_Os03g20670 ELMO/CED-12 family protein, putative, expressed FN2345 Chr3 11680001 11700000 0 0 Deletion 19999 LOC_Os03g20680 late embryogenesis abundant protein 1, putative, expressed FN2345 Chr3 11698796 11899516 0 0 Inversion 0 FN2345 Chr3 12280298 12280309 0 0 Deletion 11 HET FN2345 Chr3 16846711 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g29560 retrotransposon protein, putative, unclassified, expressed FN2345 Chr3 4130001 4161000 0 0 Deletion 30999 LOC_Os03g08080 YGGT family protein, putative, expressed FN2345 Chr3 4130001 4161000 0 0 Deletion 30999 LOC_Os03g08090 hydrolase, alpha/beta fold family protein, putative, expressed FN2345 Chr3 4130001 4161000 0 0 Deletion 30999 LOC_Os03g08100 hydrolase, alpha/beta fold family protein, putative, expressed FN2345 Chr3 4130001 4161000 0 0 Deletion 30999 LOC_Os03g08110 hydrolase protein, putative, expressed FN2345 Chr3 4130001 4161000 0 0 Deletion 30999 LOC_Os03g08114 expressed protein FN2345 Chr3 4130001 4161000 0 0 Deletion 30999 LOC_Os03g08120 retrotransposon protein, putative, unclassified, expressed FN2345 Chr3 4130001 4161000 0 0 Deletion 30999 LOC_Os03g08130 expressed protein FN2345 Chr3 4130001 4161000 0 0 Deletion 30999 LOC_Os03g08140 tubulin--tyrosine ligase-like protein 12, putative, expressed FN2345 Chr3 4130001 4161000 0 0 Deletion 30999 LOC_Os03g08150 Cupin domain containing protein, expressed FN2345 Chr3 8808823 8808828 0 0 Deletion 5 frameshift_variant HET LOC_Os03g15970 transposon protein, putative, Mariner sub-class, expressed FN2345 Chr3 9580638 C-A 0 0 Single Base Substitution 0 HET FN2345 Chr3 9580640 T-C 0 0 Single Base Substitution 0 HET FN2345 Chr4 10692542 G-A 0 0 Single Base Substitution 0 Homo FN2345 Chr4 15520020 C-A 0 0 Single Base Substitution 0 HET FN2345 Chr4 16083752 16083756 0 0 Insertion 4 HET FN2345 Chr4 18041479 C-G 0 0 Single Base Substitution 0 HET FN2345 Chr4 24280280 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os04g40910 OsFBX146 - F-box domain containing protein, expressed FN2345 Chr4 35465914 C-T 0 0 Single Base Substitution 0 HET FN2345 Chr5 24476976 24476982 0 0 Deletion 6 inframe_deletion Homo LOC_Os05g41795 zinc finger C3HC4 type family protein, putative, expressed FN2345 Chr5 8251888 8251892 0 0 Deletion 4 Homo FN2345 Chr6 13120571 C-T 0 0 Single Base Substitution 0 HET FN2345 Chr6 19672475 T-G 0 0 Single Base Substitution 0 HET FN2345 Chr6 21302077 21302093 0 0 Deletion 16 HET FN2345 Chr6 23709947 23709959 0 0 Deletion 12 HET FN2345 Chr6 30584566 A-T 0 0 Single Base Substitution 0 HET FN2345 Chr7 10782250 G-T 0 0 Single Base Substitution 0 HET FN2345 Chr7 15419183 T-G 0 0 Single Base Substitution 0 HET FN2345 Chr7 16482064 16482068 0 0 Deletion 4 Homo FN2345 Chr7 20245987 A-G 0 0 Single Base Substitution 0 Homo FN2345 Chr7 2128487 C-T 0 0 Single Base Substitution 0 Homo FN2345 Chr7 21610140 22251752 0 0 Inversion 0 FN2345 Chr7 21610140 22251752 0 0 Inversion 0 LOC_Os07g37140 expressed protein FN2345 Chr7 21610148 22251757 0 0 Inversion 0 FN2345 Chr7 21610148 22251757 0 0 Inversion 0 LOC_Os07g37140 expressed protein FN2345 Chr7 21726818 21726825 0 0 Deletion 7 Homo FN2345 Chr7 21985710 21985712 0 0 Insertion 2 HET FN2345 Chr7 8437472 8437473 0 0 Deletion 1 HET FN2345 Chr7 8720519 8720524 0 0 Deletion 5 HET FN2345 Chr8 23204470 T-A 0 0 Single Base Substitution 0 Homo FN2345 Chr8 27592818 T-A 0 0 Single Base Substitution 0 HET FN2345 Chr9 5351332 T-C 0 0 Single Base Substitution 0 Homo FN2345 Chr9 5616437 A-G 0 0 Single Base Substitution 0 Homo