FN2403 Chr1 15580472 A-C 0 0 Single Base Substitution 0 HET FN2403 Chr1 17290453 T-A 0 0 Single Base Substitution 0 HET FN2403 Chr1 18144992 G-T 0 0 Single Base Substitution 0 HET FN2403 Chr1 18912901 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g34310 retrotransposon protein, putative, unclassified, expressed FN2403 Chr1 19287164 G-A 0 0 Single Base Substitution 0 HET FN2403 Chr1 19287638 T-C 0 0 Single Base Substitution 0 HET FN2403 Chr1 25296082 25296084 0 0 Insertion 2 HET FN2403 Chr1 31743381 C-T 0 0 Single Base Substitution 0 HET FN2403 Chr1 3770791 C-T 0 0 Single Base Substitution 0 HET FN2403 Chr1 5051625 C-A 0 0 Single Base Substitution 0 HET FN2403 Chr10 11483581 G-A 0 0 Single Base Substitution 0 HET FN2403 Chr10 16159474 G-T 0 0 Single Base Substitution 0 HET FN2403 Chr10 16864567 A-T 0 0 Single Base Substitution 0 HET FN2403 Chr10 6319795 6319799 0 0 Deletion 4 frameshift_variant Homo LOC_Os10g11400 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2403 Chr10 6421367 Chr4 4049398 0 Translocation 0 FN2403 Chr10 8361393 G-T 0 0 Single Base Substitution 0 HET FN2403 Chr11 10044983 A-T 0 0 Single Base Substitution 0 HET FN2403 Chr11 21924108 T-C 0 0 Single Base Substitution 0 Homo FN2403 Chr11 26698376 26698469 0 0 Deletion 93 HET FN2403 Chr11 7050277 G-A 0 0 Single Base Substitution 0 HET FN2403 Chr11 9951637 C-T 0 0 Single Base Substitution 0 HET FN2403 Chr12 11255291 A-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g19370 DNA polymerase I family protein, expressed FN2403 Chr12 12430437 A-T 0 0 Single Base Substitution 0 HET FN2403 Chr12 12433567 G-A 0 0 Single Base Substitution 0 HET FN2403 Chr12 12671010 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g22440 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2403 Chr12 15072107 C-T 0 0 Single Base Substitution 0 HET FN2403 Chr12 15943162 T-G 0 0 Single Base Substitution 0 HET FN2403 Chr12 26790647 C-A 0 0 Single Base Substitution 0 HET FN2403 Chr12 27094177 Chr4 9895922 0 Translocation 0 FN2403 Chr12 27094177 Chr4 9895922 0 Translocation 0 LOC_Os04g18010 cleavage and polyadenylation specificity factor subunit 1, putative, expressed FN2403 Chr12 3391491 G-A 0 0 Single Base Substitution 0 STOP_GAINED HET LOC_Os12g06940 hypothetical protein FN2403 Chr12 4538793 C-T 0 0 Single Base Substitution 0 HET FN2403 Chr12 4669108 C-A 0 0 Single Base Substitution 0 HET FN2403 Chr12 8978787 8978800 0 0 Insertion 13 HET FN2403 Chr2 10196783 T-C 0 0 Single Base Substitution 0 HET FN2403 Chr2 12743571 G-A 0 0 Single Base Substitution 0 HET FN2403 Chr2 23302969 C-G 0 0 Single Base Substitution 0 HET FN2403 Chr2 28753567 C-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os02g47100 expressed protein FN2403 Chr2 33079001 33118000 0 0 Deletion 38999 LOC_Os02g54010 lipase class 3 family protein, putative, expressed FN2403 Chr2 33079001 33118000 0 0 Deletion 38999 LOC_Os02g54020 DEAD-box ATP-dependent RNA helicase, putative, expressed FN2403 Chr2 33079001 33118000 0 0 Deletion 38999 LOC_Os02g54030 polygalacturonase, putative, expressed FN2403 Chr2 33079001 33118000 0 0 Deletion 38999 LOC_Os02g54040 expressed protein FN2403 Chr2 33079001 33118000 0 0 Deletion 38999 LOC_Os02g54050 ethylene-responsive transcription factor, putative, expressed FN2403 Chr2 33079001 33118000 0 0 Deletion 38999 LOC_Os02g54060 chaperonin, putative, expressed FN2403 Chr2 3516935 T-C 0 0 Single Base Substitution 0 HET FN2403 Chr2 4644522 G-T 0 0 Single Base Substitution 0 HET FN2403 Chr3 17796306 C-T 0 0 Single Base Substitution 0 HET FN2403 Chr3 18317751 18317753 0 0 Insertion 2 HET FN2403 Chr3 26401860 26917627 0 0 Inversion 0 LOC_Os03g46650 WD domain, G-beta repeat domain containing protein, expressed FN2403 Chr3 26401860 26917627 0 0 Inversion 0 LOC_Os03g47580 ubiquitin-conjugating enzyme, putative, expressed FN2403 Chr3 26401862 26917627 0 0 Inversion 0 LOC_Os03g46650 WD domain, G-beta repeat domain containing protein, expressed FN2403 Chr3 26401862 26917627 0 0 Inversion 0 LOC_Os03g47580 ubiquitin-conjugating enzyme, putative, expressed FN2403 Chr3 26824858 A-G 0 0 Single Base Substitution 0 HET FN2403 Chr3 33473198 C-T 0 0 Single Base Substitution 0 HET FN2403 Chr4 10057175 G-A 0 0 Single Base Substitution 0 HET FN2403 Chr4 10857348 C-A 0 0 Single Base Substitution 0 HET FN2403 Chr4 11115238 G-A 0 0 Single Base Substitution 0 HET FN2403 Chr4 13480180 Chr2 35133159 0 Translocation 0 LOC_Os02g57360 heavy metal-associated domain containing protein, expressed FN2403 Chr4 13480180 Chr2 35133159 0 Translocation 0 LOC_Os04g23570 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2403 Chr4 13480182 Chr2 35133153 0 Translocation 0 LOC_Os02g57360 heavy metal-associated domain containing protein, expressed FN2403 Chr4 13480182 Chr2 35133153 0 Translocation 0 LOC_Os04g23570 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2403 Chr4 16266488 C-T 0 0 Single Base Substitution 0 HET FN2403 Chr4 18925893 G-T 0 0 Single Base Substitution 0 HET FN2403 Chr4 18973314 A-T 0 0 Single Base Substitution 0 HET FN2403 Chr4 20648675 G-T 0 0 Single Base Substitution 0 HET FN2403 Chr4 24807979 A-C 0 0 Single Base Substitution 0 HET FN2403 Chr4 27874912 G-A 0 0 Single Base Substitution 0 HET FN2403 Chr4 4053803 G-C 0 0 Single Base Substitution 0 HET FN2403 Chr4 5865487 G-T 0 0 Single Base Substitution 0 HET FN2403 Chr4 7416145 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g13340 retrotransposon protein, putative, unclassified FN2403 Chr5 11209115 11706757 0 0 Inversion 0 FN2403 Chr5 11571564 C-G 0 0 Single Base Substitution 0 HET FN2403 Chr5 11907260 C-T 0 0 Single Base Substitution 0 HET FN2403 Chr5 17716771 C-A 0 0 Single Base Substitution 0 HET FN2403 Chr5 23402724 C-T 0 0 Single Base Substitution 0 HET FN2403 Chr5 28963008 G-A 0 0 Single Base Substitution 0 HET FN2403 Chr5 3712833 C-G 0 0 Single Base Substitution 0 HET FN2403 Chr5 8732598 C-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g15450 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2403 Chr6 11818157 11818159 0 0 Deletion 2 HET FN2403 Chr6 14088922 T-A 0 0 Single Base Substitution 0 HET FN2403 Chr6 14088923 C-A 0 0 Single Base Substitution 0 HET FN2403 Chr6 27430596 T-A 0 0 Single Base Substitution 0 HET FN2403 Chr6 600827 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os06g02054 OsFBX180 - F-box domain containing protein, expressed FN2403 Chr6 9013326 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os06g15870 retrotransposon protein, putative, unclassified, expressed FN2403 Chr6 9792077 Chr5 5048128 0 Translocation 0 LOC_Os05g09080 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2403 Chr6 9792077 Chr5 5048128 0 Translocation 0 LOC_Os06g16890 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2403 Chr7 16443048 A-G 0 0 Single Base Substitution 0 HET FN2403 Chr7 17369052 A-T 0 0 Single Base Substitution 0 HET FN2403 Chr7 2078346 G-T 0 0 Single Base Substitution 0 HET FN2403 Chr7 21177907 21442628 0 0 Inversion 0 LOC_Os07g35410 TKL_IRAK_DUF26-lc.18 - DUF26 kinases have homology to DUF26 containing loci, expressed FN2403 Chr7 21177907 21442628 0 0 Inversion 0 LOC_Os07g35810 TKL_IRAK_DUF26-ld.6 - DUF26 kinases have homology to DUF26 containing loci, expressed FN2403 Chr7 21177911 21442627 0 0 Inversion 0 LOC_Os07g35410 TKL_IRAK_DUF26-lc.18 - DUF26 kinases have homology to DUF26 containing loci, expressed FN2403 Chr7 21177911 21442627 0 0 Inversion 0 LOC_Os07g35810 TKL_IRAK_DUF26-ld.6 - DUF26 kinases have homology to DUF26 containing loci, expressed FN2403 Chr7 21340984 T-C 0 0 Single Base Substitution 0 HET FN2403 Chr7 2360028 G-A 0 0 Single Base Substitution 0 HET FN2403 Chr7 23617301 C-T 0 0 Single Base Substitution 0 HET FN2403 Chr7 24556081 G-A 0 0 Single Base Substitution 0 STOP_GAINED HET LOC_Os07g41050 NAD dependent epimerase/dehydratase family protein, putative, expressed FN2403 Chr7 27604320 27604323 0 0 Insertion 3 disruptive_inframe_insertion HET LOC_Os07g46260 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2403 Chr7 29194649 T-A 0 0 Single Base Substitution 0 HET FN2403 Chr8 13083508 C-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os08g21860 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2403 Chr8 13733197 Chr5 20095876 0 Translocation 0 FN2403 Chr8 13737081 Chr5 20095885 0 Translocation 0 LOC_Os08g22840 expressed protein FN2403 Chr8 17700163 C-A 0 0 Single Base Substitution 0 Homo FN2403 Chr8 18930657 Chr1 3645065 0 Translocation 0 FN2403 Chr8 20541275 G-A 0 0 Single Base Substitution 0 HET FN2403 Chr8 23153088 Chr6 3434471 0 Translocation 0 FN2403 Chr8 6572059 G-A 0 0 Single Base Substitution 0 HET FN2403 Chr8 7681223 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os08g12920 retrotransposon protein, putative, unclassified, expressed FN2403 Chr8 899465 T-A 0 0 Single Base Substitution 0 Homo FN2403 Chr9 11101152 T-A 0 0 Single Base Substitution 0 HET FN2403 Chr9 12857333 G-A 0 0 Single Base Substitution 0 STOP_GAINED HET LOC_Os09g21320 retrotransposon protein, putative, unclassified, expressed FN2403 Chr9 16429170 A-T 0 0 Single Base Substitution 0 HET FN2403 Chr9 21072838 C-A 0 0 Single Base Substitution 0 HET FN2403 Chr9 21072839 G-T 0 0 Single Base Substitution 0 HET