FN2412 Chr1 19754295 G-A 0 0 Single Base Substitution 0 HET FN2412 Chr1 23003215 G-C 0 0 Single Base Substitution 0 HET FN2412 Chr1 23679422 G-T 0 0 Single Base Substitution 0 HET FN2412 Chr1 24762649 G-A 0 0 Single Base Substitution 0 HET FN2412 Chr1 36547446 C-T 0 0 Single Base Substitution 0 HET FN2412 Chr10 10544001 10608000 0 0 Deletion 63999 LOC_Os10g20794 transposon protein, putative, CACTA, En/Spm sub-class FN2412 Chr10 10544001 10608000 0 0 Deletion 63999 LOC_Os10g20810 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2412 Chr10 10544001 10608000 0 0 Deletion 63999 LOC_Os10g20820 hypothetical protein FN2412 Chr10 10544001 10608000 0 0 Deletion 63999 LOC_Os10g20830 LTPL133 - Protease inhibitor/seed storage/LTP family protein precursor, expressed FN2412 Chr10 10544001 10608000 0 0 Deletion 63999 LOC_Os10g20840 LTPL134 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed FN2412 Chr10 10544001 10608000 0 0 Deletion 63999 LOC_Os10g20860 protease inhibitor/seed storage/LTP family, putative, expressed FN2412 Chr10 10544001 10608000 0 0 Deletion 63999 LOC_Os10g20870 expressed protein FN2412 Chr10 10544001 10608000 0 0 Deletion 63999 LOC_Os10g20880 LTPL136 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed FN2412 Chr10 10544001 10608000 0 0 Deletion 63999 LOC_Os10g20890 LTPL137 - Protease inhibitor/seed storage/LTP family protein precursor, expressed FN2412 Chr10 10544001 10608000 0 0 Deletion 63999 LOC_Os10g20900 hypothetical protein FN2412 Chr10 10544001 10608000 0 0 Deletion 63999 LOC_Os10g20910 40S ribosomal protein S23, putative FN2412 Chr10 10544001 10608000 0 0 Deletion 63999 LOC_Os10g20920 retrotransposon protein, putative, unclassified, expressed FN2412 Chr10 10544001 10608000 0 0 Deletion 63999 LOC_Os10g20930 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2412 Chr10 10544001 10608000 0 0 Deletion 63999 LOC_Os10g20940 retrotransposon protein, putative, Ty3-gypsy subclass FN2412 Chr10 10544001 10608000 0 0 Deletion 63999 LOC_Os10g20950 expressed protein FN2412 Chr10 10544001 10608000 0 0 Deletion 63999 LOC_Os10g20960 retrotransposon protein, putative, unclassified, expressed FN2412 Chr10 13461896 C-A 0 0 Single Base Substitution 0 HET FN2412 Chr10 15159146 T-C 0 0 Single Base Substitution 0 HET FN2412 Chr10 16688162 A-G 0 0 Single Base Substitution 0 Homo FN2412 Chr10 3386611 3386613 0 0 Insertion 2 HET FN2412 Chr10 4340128 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os10g08018 expressed protein FN2412 Chr11 14653027 C-A 0 0 Single Base Substitution 0 STOP_GAINED Homo LOC_Os11g25690 retrotransposon protein, putative, unclassified, expressed FN2412 Chr11 16593829 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os11g28700 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2412 Chr11 18215515 18215516 0 0 Insertion 1 HET FN2412 Chr11 25042746 G-A 0 0 Single Base Substitution 0 HET FN2412 Chr11 28627092 Chr10 752826 0 Translocation 0 FN2412 Chr12 14386291 C-A 0 0 Single Base Substitution 0 Homo FN2412 Chr12 14883421 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g25680 Papain family cysteine protease domain containing protein, expressed FN2412 Chr12 15810132 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os12g26990 hypothetical protein FN2412 Chr12 15810552 16085304 0 0 Inversion 0 LOC_Os12g26990 hypothetical protein FN2412 Chr12 15989418 A-T 0 0 Single Base Substitution 0 Homo FN2412 Chr12 24394714 24394718 0 0 Deletion 4 Homo FN2412 Chr12 24899750 25423356 0 0 Inversion 0 FN2412 Chr12 24899756 25423361 0 0 Inversion 0 FN2412 Chr12 4896610 A-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os12g09330 transposon protein, putative, Mariner sub-class, expressed FN2412 Chr12 5274832 5274837 0 0 Deletion 5 HET FN2412 Chr12 5651549 G-A 0 0 Single Base Substitution 0 HET FN2412 Chr2 12400378 T-C 0 0 Single Base Substitution 0 HET FN2412 Chr2 22267407 A-T 0 0 Single Base Substitution 0 Homo FN2412 Chr2 28196743 C-T 0 0 Single Base Substitution 0 Homo FN2412 Chr2 33692648 33716503 0 0 Inversion 0 LOC_Os02g54990 TMS membrane protein/tumour differentially expressed protein, putative, expressed FN2412 Chr2 33692648 33716503 0 0 Inversion 0 LOC_Os02g55030 hydrolase, NUDIX family, domain containing protein, expressed FN2412 Chr2 33692734 33716510 0 0 Inversion 0 LOC_Os02g54990 TMS membrane protein/tumour differentially expressed protein, putative, expressed FN2412 Chr2 33692734 33716510 0 0 Inversion 0 LOC_Os02g55030 hydrolase, NUDIX family, domain containing protein, expressed FN2412 Chr2 35068149 A-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os02g57240 oxidoreductase, aldo/keto reductase family protein, putative, expressed FN2412 Chr2 6216164 G-A 0 0 Single Base Substitution 0 HET FN2412 Chr3 10384604 C-T 0 0 Single Base Substitution 0 HET FN2412 Chr3 12694001 12708000 0 0 Deletion 13999 LOC_Os03g22160 relA-SpoT like protein RSH1, putative, expressed FN2412 Chr3 13917715 A-G 0 0 Single Base Substitution 0 HET FN2412 Chr3 18508502 G-T 0 0 Single Base Substitution 0 HET FN2412 Chr3 20055353 G-T 0 0 Single Base Substitution 0 Homo FN2412 Chr3 20402302 20402303 0 0 Deletion 1 Homo FN2412 Chr3 25464291 C-T 0 0 Single Base Substitution 0 SPLICE_SITE_ACCEPTOR HET LOC_Os03g45120 ribosome inactivating protein, putative, expressed FN2412 Chr3 26934120 C-T 0 0 Single Base Substitution 0 HET FN2412 Chr3 426375 T-G 0 0 Single Base Substitution 0 HET FN2412 Chr4 10145304 C-A 0 0 Single Base Substitution 0 HET FN2412 Chr4 14577948 G-C 0 0 Single Base Substitution 0 HET FN2412 Chr4 17123845 G-A 0 0 Single Base Substitution 0 HET FN2412 Chr4 23660001 23675000 0 0 Deletion 14999 LOC_Os04g39700 60S ribosomal protein L6, putative, expressed FN2412 Chr4 23660001 23675000 0 0 Deletion 14999 LOC_Os04g39710 retrotransposon protein, putative, unclassified, expressed FN2412 Chr4 23660001 23675000 0 0 Deletion 14999 LOC_Os04g39720 retrotransposon protein, putative, unclassified, expressed FN2412 Chr4 23660001 23675000 0 0 Deletion 14999 LOC_Os04g39730 retrotransposon protein, putative, unclassified, expressed FN2412 Chr4 23684001 23726000 0 0 Deletion 41999 LOC_Os04g39740 retrotransposon protein, putative, unclassified, expressed FN2412 Chr4 23684001 23726000 0 0 Deletion 41999 LOC_Os04g39750 retrotransposon protein, putative, unclassified FN2412 Chr4 23684001 23726000 0 0 Deletion 41999 LOC_Os04g39760 retrotransposon protein, putative, unclassified, expressed FN2412 Chr4 23684001 23726000 0 0 Deletion 41999 LOC_Os04g39770 expressed protein FN2412 Chr4 23684001 23726000 0 0 Deletion 41999 LOC_Os04g39780 AMP-binding enzyme family protein, expressed FN2412 Chr4 23684001 23726000 0 0 Deletion 41999 LOC_Os04g39800 expressed protein FN2412 Chr4 23684001 23726000 0 0 Deletion 41999 LOC_Os04g39814 Os4bglu9 - beta-glucosidase homologue, similar to Os4Bglu12 exoglucanase/beta-glucosidase, expressed FN2412 Chr4 23684001 23726000 0 0 Deletion 41999 LOC_Os04g39830 expressed protein FN2412 Chr4 28682998 28682999 0 0 Deletion 1 HET FN2412 Chr4 33111949 Chr2 8784357 0 Translocation 0 LOC_Os02g15630 retrotransposon protein, putative, unclassified, expressed FN2412 Chr4 33111949 Chr2 8784357 0 Translocation 0 LOC_Os04g55620 receptor kinase, putative, expressed FN2412 Chr4 34712012 34712023 0 0 Deletion 11 Homo FN2412 Chr5 10007414 10007415 0 0 Insertion 1 HET FN2412 Chr5 13605367 A-T 0 0 Single Base Substitution 0 HET FN2412 Chr5 13605368 A-T 0 0 Single Base Substitution 0 HET FN2412 Chr5 13850590 C-T 0 0 Single Base Substitution 0 HET FN2412 Chr5 14061090 C-T 0 0 Single Base Substitution 0 HET FN2412 Chr5 20080234 20080236 0 0 Deletion 2 HET FN2412 Chr5 20671160 C-A 0 0 Single Base Substitution 0 HET FN2412 Chr5 23319220 G-A 0 0 Single Base Substitution 0 HET FN2412 Chr5 23896995 T-G 0 0 Single Base Substitution 0 HET FN2412 Chr5 24752691 G-A 0 0 Single Base Substitution 0 HET FN2412 Chr5 25821980 Chr2 33436575 0 Translocation 0 LOC_Os02g54590 serine threonine kinase, putative, expressed FN2412 Chr5 25821980 Chr2 33436575 0 Translocation 0 LOC_Os05g44380 MPPN domain containing protein, expressed FN2412 Chr5 25834120 Chr2 33437748 0 Translocation 0 LOC_Os02g54590 serine threonine kinase, putative, expressed FN2412 Chr5 25834120 Chr2 33437748 0 Translocation 0 LOC_Os05g44400 GATA zinc finger domain containing protein, expressed FN2412 Chr5 3337621 3337627 0 0 Deletion 6 HET FN2412 Chr5 9551436 G-A 0 0 Single Base Substitution 0 HET FN2412 Chr6 10212257 T-C 0 0 Single Base Substitution 0 HET FN2412 Chr6 11031128 A-T 0 0 Single Base Substitution 0 Homo FN2412 Chr6 11497607 T-C 0 0 Single Base Substitution 0 Homo FN2412 Chr6 16129979 C-A 0 0 Single Base Substitution 0 HET FN2412 Chr6 19886304 19886308 0 0 Deletion 4 frameshift_variant HET LOC_Os06g34140 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2412 Chr6 22412206 A-T 0 0 Single Base Substitution 0 HET FN2412 Chr6 2596531 G-A 0 0 Single Base Substitution 0 HET FN2412 Chr6 30975185 30975200 0 0 Deletion 15 HET FN2412 Chr6 3595079 T-C 0 0 Single Base Substitution 0 HET FN2412 Chr6 7907989 T-G 0 0 Single Base Substitution 0 HET FN2412 Chr7 25633734 26209881 0 0 Inversion 0 LOC_Os07g42790 caltractin, putative, expressed FN2412 Chr7 26209883 Chr4 2784322 0 Translocation 0 FN2412 Chr7 26210333 Chr4 2784320 0 Translocation 0 FN2412 Chr7 26969619 T-C 0 0 Single Base Substitution 0 Homo FN2412 Chr7 3543856 C-A 0 0 Single Base Substitution 0 Homo FN2412 Chr8 10668730 Chr6 18881069 0 Translocation 0 FN2412 Chr8 10668730 Chr6 18881069 0 Translocation 0 LOC_Os06g32470 retrotransposon protein, putative, unclassified, expressed FN2412 Chr8 10778209 Chr7 25633744 0 Translocation 0 FN2412 Chr8 10778209 Chr7 25633744 0 Translocation 0 LOC_Os07g42790 caltractin, putative, expressed FN2412 Chr8 10782911 10783808 0 0 Inversion 0 FN2412 Chr8 10782915 Chr7 26210343 0 Translocation 0 FN2412 Chr8 11800580 11800582 0 0 Deletion 2 HET FN2412 Chr8 17058106 17058156 0 0 Deletion 50 HET FN2412 Chr8 19135584 G-A 0 0 Single Base Substitution 0 HET FN2412 Chr8 5550492 T-C 0 0 Single Base Substitution 0 HET FN2412 Chr9 14230785 G-A 0 0 Single Base Substitution 0 HET FN2412 Chr9 15663691 15663693 0 0 Deletion 2 HET FN2412 Chr9 3222801 A-G 0 0 Single Base Substitution 0 HET FN2412 Chr9 6412666 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os09g11490 retrotransposon protein, putative, unclassified, expressed FN2412 Chr9 8291974 A-T 0 0 Single Base Substitution 0 HET