FN2419 Chr1 14983816 G-C 0 0 Single Base Substitution 0 HET FN2419 Chr1 22703238 22703239 0 0 Deletion 1 frameshift_variant HET LOC_Os01g40230 transposon protein, putative, unclassified, expressed FN2419 Chr1 29700875 G-A 0 0 Single Base Substitution 0 HET FN2419 Chr1 33637558 G-C 0 0 Single Base Substitution 0 HET FN2419 Chr10 18237894 G-C 0 0 Single Base Substitution 0 HET FN2419 Chr10 19418877 C-T 0 0 Single Base Substitution 0 HET FN2419 Chr10 22368343 C-T 0 0 Single Base Substitution 0 HET FN2419 Chr10 22895940 22895941 0 0 Deletion 1 Homo FN2419 Chr10 4519166 C-T 0 0 Single Base Substitution 0 HET FN2419 Chr10 7714470 7714477 0 0 Deletion 7 HET FN2419 Chr11 14234991 G-A 0 0 Single Base Substitution 0 Homo FN2419 Chr11 16256902 16256911 0 0 Deletion 9 Homo FN2419 Chr11 18642018 18642024 0 0 Deletion 6 Homo FN2419 Chr11 9355078 Chr8 9822301 0 Translocation 0 FN2419 Chr12 16568917 16568919 0 0 Insertion 2 HET FN2419 Chr12 21961534 G-C 0 0 Single Base Substitution 0 HET FN2419 Chr12 25184756 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g40680 retrotransposon protein, putative, unclassified, expressed FN2419 Chr12 9098947 C-T 0 0 Single Base Substitution 0 HET FN2419 Chr12 9389047 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g16400 transposon protein, putative, CACTA, En/Spm sub-class FN2419 Chr2 24730644 T-G 0 0 Single Base Substitution 0 HET FN2419 Chr3 1308732 A-T 0 0 Single Base Substitution 0 HET FN2419 Chr3 15944993 15945000 0 0 Deletion 7 HET FN2419 Chr3 17886591 T-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g31400 U-box domain-containing protein, putative, expressed FN2419 Chr3 23497964 T-C 0 0 Single Base Substitution 0 HET FN2419 Chr3 23878924 23878927 0 0 Deletion 3 HET FN2419 Chr3 28466294 28466296 0 0 Deletion 2 HET FN2419 Chr3 6356029 T-C 0 0 Single Base Substitution 0 Homo FN2419 Chr3 9011589 9011590 0 0 Deletion 1 Homo FN2419 Chr4 10412770 10412785 0 0 Deletion 15 Homo FN2419 Chr4 14740844 14740846 0 0 Insertion 2 HET FN2419 Chr4 18824325 T-C 0 0 Single Base Substitution 0 HET FN2419 Chr4 24930135 G-A 0 0 Single Base Substitution 0 HET FN2419 Chr4 27150966 C-A 0 0 Single Base Substitution 0 HET FN2419 Chr4 28436267 T-C 0 0 Single Base Substitution 0 HET FN2419 Chr4 31841904 C-A 0 0 Single Base Substitution 0 HET FN2419 Chr4 766031 766037 0 0 Deletion 6 splice_acceptor_variant&splice_region_variant&intron_variant Homo LOC_Os04g02230 retrotransposon, putative, centromere-specific, expressed FN2419 Chr5 12778209 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os05g22500 retrotransposon protein, putative, unclassified, expressed FN2419 Chr5 18970934 C-T 0 0 Single Base Substitution 0 HET FN2419 Chr5 19466185 19466189 0 0 Deletion 4 Homo FN2419 Chr5 28426167 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os05g49560 retrotransposon protein, putative, unclassified, expressed FN2419 Chr5 29524778 29524779 0 0 Deletion 1 frameshift_variant Homo LOC_Os05g51490 SIT4 phosphatase-associated protein domain containing protein, expressed FN2419 Chr5 6673605 T-G 0 0 Single Base Substitution 0 Homo FN2419 Chr5 7811911 C-T 0 0 Single Base Substitution 0 HET FN2419 Chr6 10071236 10071237 0 0 Deletion 1 HET FN2419 Chr6 188493 C-T 0 0 Single Base Substitution 0 HET FN2419 Chr6 191763 191765 0 0 Deletion 2 HET FN2419 Chr6 192163 G-A 0 0 Single Base Substitution 0 HET FN2419 Chr6 29880385 G-T 0 0 Single Base Substitution 0 SPLICE_SITE_DONOR HET LOC_Os06g49310 MATE efflux family protein, putative, expressed FN2419 Chr6 4047855 4047857 0 0 Deletion 2 Homo FN2419 Chr6 9297445 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os06g16310 retrotransposon protein, putative, unclassified, expressed FN2419 Chr7 12285784 C-T 0 0 Single Base Substitution 0 HET FN2419 Chr7 16635427 C-T 0 0 Single Base Substitution 0 HET FN2419 Chr7 18774477 19749580 0 0 Inversion 0 LOC_Os07g31620 transposon protein, putative, Pong sub-class, expressed FN2419 Chr7 19749552 19750124 0 0 Inversion 0 FN2419 Chr7 6421809 C-A 0 0 Single Base Substitution 0 HET FN2419 Chr7 6872640 6872644 0 0 Deletion 4 HET FN2419 Chr8 10828772 Chr4 21079413 0 Translocation 0 FN2419 Chr8 22255753 22255779 0 0 Deletion 26 HET FN2419 Chr8 3871198 3871202 0 0 Deletion 4 HET FN2419 Chr9 12386018 G-A 0 0 Single Base Substitution 0 HET FN2419 Chr9 12945504 C-A 0 0 Single Base Substitution 0 HET FN2419 Chr9 13260115 C-T 0 0 Single Base Substitution 0 HET FN2419 Chr9 15571793 Chr1 1103140 0 Translocation 0 FN2419 Chr9 16022439 C-T 0 0 Single Base Substitution 0 HET FN2419 Chr9 2910928 T-A 0 0 Single Base Substitution 0 HET FN2419 Chr9 519234 A-T 0 0 Single Base Substitution 0 HET FN2419 Chr9 6735634 G-C 0 0 Single Base Substitution 0 HET FN2419 Chr9 9789988 9790008 0 0 Deletion 20 HET