FN2420 Chr1 26765001 26778000 0 0 Deletion 12999 LOC_Os01g46900 transposon protein, putative, Mariner sub-class, expressed FN2420 Chr1 26765001 26778000 0 0 Deletion 12999 LOC_Os01g46910 microneme protein Sm70, putative, expressed FN2420 Chr1 26765001 26778000 0 0 Deletion 12999 LOC_Os01g46920 expressed protein FN2420 Chr1 2758247 G-A 0 0 Single Base Substitution 0 Homo FN2420 Chr1 29822248 G-A 0 0 Single Base Substitution 0 HET FN2420 Chr1 40107058 40107060 0 0 Deletion 2 HET FN2420 Chr1 4666890 4666891 0 0 Insertion 1 Homo FN2420 Chr10 1129054 1129060 0 0 Deletion 6 HET FN2420 Chr10 15524602 15524611 0 0 Deletion 9 disruptive_inframe_deletion Homo LOC_Os10g29880 expressed protein FN2420 Chr10 18986169 18986170 0 0 Insertion 1 HET FN2420 Chr10 22796758 22796792 0 0 Insertion 34 HET FN2420 Chr11 12925687 Chr6 18229392 0 Translocation 0 FN2420 Chr11 17620255 T-C 0 0 Single Base Substitution 0 HET FN2420 Chr11 17701376 Chr8 24046280 0 Translocation 0 FN2420 Chr11 23312702 23312710 0 0 Deletion 8 frameshift_variant Homo LOC_Os11g39160 NBS-LRR disease resistance protein, putative, expressed FN2420 Chr11 23866848 G-C 0 0 Single Base Substitution 0 HET FN2420 Chr12 10858633 G-A 0 0 Single Base Substitution 0 HET FN2420 Chr12 14574337 14574349 0 0 Deletion 12 HET FN2420 Chr2 20526845 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os02g34300 transposon protein, putative, unclassified, expressed FN2420 Chr2 25273520 A-G 0 0 Single Base Substitution 0 HET FN2420 Chr2 33853945 C-T 0 0 Single Base Substitution 0 Homo FN2420 Chr3 30975361 T-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os03g54030 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2420 Chr3 36315353 C-T 0 0 Single Base Substitution 0 Homo FN2420 Chr4 17544827 C-T 0 0 Single Base Substitution 0 Homo FN2420 Chr4 19226660 T-G 0 0 Single Base Substitution 0 Homo FN2420 Chr4 19226661 T-A 0 0 Single Base Substitution 0 Homo FN2420 Chr4 20626757 G-T 0 0 Single Base Substitution 0 Homo FN2420 Chr4 21788458 21788461 0 0 Deletion 3 Homo FN2420 Chr4 28606001 28625000 0 0 Deletion 18999 LOC_Os04g48070 homeobox and START domains containing protein, putative, expressed FN2420 Chr4 28606001 28625000 0 0 Deletion 18999 LOC_Os04g48080 retrotransposon protein, putative, unclassified, expressed FN2420 Chr4 28606001 28625000 0 0 Deletion 18999 LOC_Os04g48094 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2420 Chr4 28636001 28666000 0 0 Deletion 29999 LOC_Os04g48110 retrotransposon protein, putative, unclassified FN2420 Chr4 28636001 28666000 0 0 Deletion 29999 LOC_Os04g48130 OsRhmbd11 - Putative Rhomboid homologue, expressed FN2420 Chr4 28636001 28666000 0 0 Deletion 29999 LOC_Os04g48140 methyltransferase, putative, expressed FN2420 Chr4 28636001 28666000 0 0 Deletion 29999 LOC_Os04g48150 retrotransposon protein, putative, unclassified, expressed FN2420 Chr4 28636001 28666000 0 0 Deletion 29999 LOC_Os04g48160 IQ calmodulin-binding motif family protein, putative, expressed FN2420 Chr4 33216595 A-G 0 0 Single Base Substitution 0 HET FN2420 Chr4 703349 703367 0 0 Insertion 18 HET FN2420 Chr5 13544180 13544181 0 0 Deletion 1 frameshift_variant Homo LOC_Os05g23620 cytochrome c1-1, heme protein, mitochondrial precursor, putative, expressed FN2420 Chr5 13884702 13884710 0 0 Deletion 8 HET FN2420 Chr5 26369328 A-T 0 0 Single Base Substitution 0 HET FN2420 Chr5 29886601 T-A 0 0 Single Base Substitution 0 Homo FN2420 Chr5 3665627 C-T 0 0 Single Base Substitution 0 HET FN2420 Chr5 8256416 8256417 0 0 Insertion 1 HET FN2420 Chr5 9565292 G-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g16790 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2420 Chr6 16977379 C-T 0 0 Single Base Substitution 0 Homo FN2420 Chr6 27425144 27823432 0 0 Inversion 0 LOC_Os06g45360 peptidase, M24 family protein, putative, expressed FN2420 Chr6 27425144 27823432 0 0 Inversion 0 LOC_Os06g45940 potassium transporter, putative, expressed FN2420 Chr6 27519464 27823433 0 0 Inversion 0 LOC_Os06g45500 copper-transporting ATPase, putative, expressed FN2420 Chr6 27519464 27823433 0 0 Inversion 0 LOC_Os06g45940 potassium transporter, putative, expressed FN2420 Chr6 27519730 Chr5 3637631 0 Translocation 0 LOC_Os06g45500 copper-transporting ATPase, putative, expressed FN2420 Chr6 28327388 28327393 0 0 Deletion 5 HET FN2420 Chr7 15420079 Chr2 33188672 0 Translocation 0 FN2420 Chr7 20235589 20235592 0 0 Deletion 3 Homo FN2420 Chr7 20897551 20897552 0 0 Deletion 1 Homo FN2420 Chr7 21069164 21069167 0 0 Deletion 3 Homo FN2420 Chr7 21122997 21123006 0 0 Deletion 9 Homo FN2420 Chr7 21252988 G-A 0 0 Single Base Substitution 0 Homo FN2420 Chr7 21950305 21950318 0 0 Deletion 13 HET FN2420 Chr7 9799304 9799309 0 0 Deletion 5 HET FN2420 Chr8 13263322 13263333 0 0 Deletion 11 Homo FN2420 Chr8 13273185 A-G 0 0 Single Base Substitution 0 HET FN2420 Chr8 5443739 5443740 0 0 Deletion 1 Homo FN2420 Chr8 6667830 C-T 0 0 Single Base Substitution 0 HET FN2420 Chr8 7269625 A-T 0 0 Single Base Substitution 0 HET FN2420 Chr9 18723076 Chr5 13459610 0 Translocation 0