FN2439 Chr1 14354347 14354348 0 0 Deletion 1 HET FN2439 Chr1 26495943 26495944 0 0 Insertion 1 HET FN2439 Chr1 41438042 A-G 0 0 Single Base Substitution 0 Homo FN2439 Chr1 524411 A-C 0 0 Single Base Substitution 0 Homo FN2439 Chr10 19391871 C-A 0 0 Single Base Substitution 0 HET FN2439 Chr10 19391873 A-G 0 0 Single Base Substitution 0 HET FN2439 Chr10 2694518 Chr6 22683226 0 Translocation 0 FN2439 Chr10 9326837 Chr4 6362628 0 Translocation 0 LOC_Os04g11620 retrotransposon protein, putative, unclassified, expressed FN2439 Chr10 9326837 Chr4 6362628 0 Translocation 0 LOC_Os10g18360 retrotransposon protein, putative, unclassified, expressed FN2439 Chr11 11217725 11217729 0 0 Deletion 4 Homo FN2439 Chr11 13499909 A-G 0 0 Single Base Substitution 0 Homo FN2439 Chr11 13710946 Chr2 13608070 0 Translocation 0 FN2439 Chr11 16104955 G-A 0 0 Single Base Substitution 0 Homo FN2439 Chr11 16683666 Chr3 25613097 0 Translocation 0 FN2439 Chr11 20914552 G-T 0 0 Single Base Substitution 0 Homo FN2439 Chr11 22104942 22104947 0 0 Insertion 5 HET FN2439 Chr11 23032097 Chr2 17885925 0 Translocation 0 FN2439 Chr11 23032097 Chr2 17885925 0 Translocation 0 LOC_Os02g30110 cytochrome P450, putative, expressed FN2439 Chr11 27465552 Chr7 1879461 0 Translocation 0 FN2439 Chr11 27465552 Chr7 1879461 0 Translocation 0 LOC_Os07g04260 expressed protein FN2439 Chr11 3249472 Chr1 2526265 0 Translocation 0 LOC_Os11g06670 expressed protein FN2439 Chr12 13083824 A-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os12g23130 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2439 Chr12 14346858 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os12g24990 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2439 Chr12 14347640 C-G 0 0 Single Base Substitution 0 Homo FN2439 Chr12 14922591 Chr7 26455328 0 Translocation 0 FN2439 Chr12 15228442 15228456 0 0 Insertion 14 frameshift_variant HET LOC_Os12g26140 retrotransposon protein, putative, unclassified, expressed FN2439 Chr12 15706153 15706158 0 0 Deletion 5 HET FN2439 Chr12 19840888 Chr11 7073112 0 Translocation 0 FN2439 Chr12 19840888 Chr11 7073112 0 Translocation 0 LOC_Os11g12590 expressed protein FN2439 Chr12 19866439 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os12g32870 expressed protein FN2439 Chr12 27080746 Chr6 8332724 0 Translocation 0 FN2439 Chr12 4278162 Chr4 3934578 0 Translocation 0 FN2439 Chr2 17442685 A-G 0 0 Single Base Substitution 0 Homo FN2439 Chr2 23394888 23394889 0 0 Deletion 1 HET FN2439 Chr2 30668929 A-T 0 0 Single Base Substitution 0 HET FN2439 Chr2 5325389 5427014 0 0 Inversion 0 LOC_Os02g10160 AGAP003371-PA, putative, expressed FN2439 Chr2 5325414 5436734 0 0 Inversion 0 LOC_Os02g10160 AGAP003371-PA, putative, expressed FN2439 Chr2 5325414 5436734 0 0 Inversion 0 LOC_Os02g10340 retrotransposon protein, putative, unclassified, expressed FN2439 Chr2 5427001 5437000 0 0 Deletion 9999 LOC_Os02g10330 retrotransposon protein, putative, unclassified, expressed FN2439 Chr2 5427001 5437000 0 0 Deletion 9999 LOC_Os02g10340 retrotransposon protein, putative, unclassified, expressed FN2439 Chr2 6579241 T-C 0 0 Single Base Substitution 0 HET FN2439 Chr3 13689276 T-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g24110 retrotransposon protein, putative, unclassified, expressed FN2439 Chr3 13859160 A-T 0 0 Single Base Substitution 0 HET FN2439 Chr3 19055450 19055457 0 0 Deletion 7 HET FN2439 Chr3 19759632 19759633 0 0 Insertion 1 HET FN2439 Chr3 21046302 21046304 0 0 Insertion 2 HET FN2439 Chr3 22361392 C-A 0 0 Single Base Substitution 0 Homo FN2439 Chr3 28501288 G-A 0 0 Single Base Substitution 0 HET FN2439 Chr3 32893619 G-C 0 0 Single Base Substitution 0 Homo FN2439 Chr3 3707272 3707273 0 0 Deletion 1 HET FN2439 Chr3 5872731 5872735 0 0 Insertion 4 HET FN2439 Chr3 6759847 A-T 0 0 Single Base Substitution 0 Homo FN2439 Chr4 11145276 11145279 0 0 Deletion 3 disruptive_inframe_deletion HET LOC_Os04g19990 retrotransposon protein, putative, unclassified, expressed FN2439 Chr4 19009378 Chr2 17022569 0 Translocation 0 FN2439 Chr4 19009378 Chr2 17022569 0 Translocation 0 LOC_Os02g28770 retrotransposon protein, putative, unclassified, expressed FN2439 Chr4 2365258 2365259 0 0 Insertion 1 HET FN2439 Chr4 25426406 Chr2 26281143 0 Translocation 0 LOC_Os02g43560 WRKY34, expressed FN2439 Chr4 25426406 Chr2 26281143 0 Translocation 0 LOC_Os04g42980 zinc finger family protein, putative, expressed FN2439 Chr4 29847009 29847011 0 0 Deletion 2 HET FN2439 Chr4 29932189 C-T 0 0 Single Base Substitution 0 HET FN2439 Chr4 29960342 T-A 0 0 Single Base Substitution 0 HET FN2439 Chr4 34361977 T-A 0 0 Single Base Substitution 0 HET FN2439 Chr4 8701722 C-T 0 0 Single Base Substitution 0 HET FN2439 Chr5 10199076 G-A 0 0 Single Base Substitution 0 Homo FN2439 Chr5 21955172 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g37500 expressed protein FN2439 Chr5 26651070 26651072 0 0 Insertion 2 HET FN2439 Chr5 29586810 29647152 0 0 Inversion 0 FN2439 Chr5 29586818 29647160 0 0 Inversion 0 FN2439 Chr5 7847652 Chr3 23251985 0 Translocation 0 FN2439 Chr6 14274553 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os06g24380 retrotransposon, putative, centromere-specific, expressed FN2439 Chr6 16040202 Chr4 11855994 0 Translocation 0 FN2439 Chr6 21857133 21857134 0 0 Insertion 1 HET FN2439 Chr6 2610806 T-C 0 0 Single Base Substitution 0 HET FN2439 Chr6 26111618 26111619 0 0 Insertion 1 frameshift_variant HET LOC_Os06g43450 retrotransposon protein, putative, unclassified, expressed FN2439 Chr6 2822811 2822812 0 0 Deletion 1 HET FN2439 Chr7 25836983 G-A 0 0 Single Base Substitution 0 HET FN2439 Chr7 6828001 6900000 0 0 Deletion 71999 LOC_Os07g12210 expressed protein FN2439 Chr7 6828001 6900000 0 0 Deletion 71999 LOC_Os07g12220 expressed protein FN2439 Chr7 6828001 6900000 0 0 Deletion 71999 LOC_Os07g12230 expressed protein FN2439 Chr7 6828001 6900000 0 0 Deletion 71999 LOC_Os07g12240 EF hand family protein, putative, expressed FN2439 Chr7 6828001 6900000 0 0 Deletion 71999 LOC_Os07g12250 ribosomal protein L24, putative, expressed FN2439 Chr7 6828001 6900000 0 0 Deletion 71999 LOC_Os07g12255 expressed protein FN2439 Chr7 6828001 6900000 0 0 Deletion 71999 LOC_Os07g12260 retrotransposon protein, putative, unclassified, expressed FN2439 Chr7 6828001 6900000 0 0 Deletion 71999 LOC_Os07g12270 retrotransposon protein, putative, unclassified, expressed FN2439 Chr7 6828001 6900000 0 0 Deletion 71999 LOC_Os07g12280 expressed protein FN2439 Chr7 686241 686242 0 0 Insertion 1 HET FN2439 Chr8 14223161 Chr6 18930399 0 Translocation 0 LOC_Os08g23490 retrotransposon protein, putative, unclassified FN2439 Chr8 14932717 Chr5 20403560 0 Translocation 0 FN2439 Chr8 14932717 Chr5 20403560 0 Translocation 0 LOC_Os05g34440 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2439 Chr8 28403323 Chr7 4246452 0 Translocation 0 LOC_Os07g08300 major facilitator superfamily antiporter, putative, expressed FN2439 Chr8 28403323 Chr7 4246452 0 Translocation 0 LOC_Os08g45240 RNA recognition motif containing protein, putative, expressed FN2439 Chr9 1039344 Chr2 16716796 0 Translocation 0 FN2439 Chr9 17863237 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os09g29404 glycogen operon protein glgX, putative, expressed FN2439 Chr9 18370188 Chr8 2960408 0 Translocation 0 FN2439 Chr9 5191063 Chr6 8717720 0 Translocation 0 FN2439 Chr9 7102726 Chr1 19889850 0 Translocation 0 FN2439 Chr9 8089367 C-A 0 0 Single Base Substitution 0 HET FN2439 Chr9 8926244 8926245 0 0 Deletion 1 HET