FN244-S Chr1 10759902 10759922 0 0 Deletion 20 FN244-S Chr1 1141323 1141323 0 0 Insertion 2 FN244-S Chr1 13709425 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN244-S Chr1 16236597 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g29000 retrotransposon, putative, centromere-specific, expressed FN244-S Chr1 17136302 18206821 0 0 Inversion 1070519 LOC_Os01g31310 expressed protein FN244-S Chr1 17136302 18206821 0 0 Inversion 1070519 LOC_Os01g33090 expressed protein FN244-S Chr1 17137262 18206829 0 0 Inversion 1069567 LOC_Os01g31320 retrotransposon, putative, centromere-specific FN244-S Chr1 17137262 18206829 0 0 Inversion 1069567 LOC_Os01g33090 expressed protein FN244-S Chr1 1981131 1981131 0 0 Insertion 1 FN244-S Chr1 23389536 23389547 0 0 Deletion 11 FN244-S Chr1 24958491 G-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN244-S Chr1 2743564 2743564 0 0 Insertion 3 FN244-S Chr1 29026017 A-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN244-S Chr1 39221662 T-G 0 0 Single Base Substitution 0 INTERGENIC HET FN244-S Chr1 39262332 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN244-S Chr1 3942243 3942251 0 0 Deletion 8 LOC_Os01g08150 expressed protein FN244-S Chr1 5528656 5528672 0 0 Deletion 16 FN244-S Chr1 8467909 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN244-S Chr10 16071135 16071139 0 0 Deletion 4 FN244-S Chr10 2337941 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN244-S Chr10 4934277 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN244-S Chr10 5865882 5865889 0 0 Deletion 7 FN244-S Chr10 6183740 C-G 0 0 Single Base Substitution 0 INTERGENIC HET FN244-S Chr10 7703710 7703715 0 0 Deletion 5 FN244-S Chr10 7794856 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN244-S Chr11 17631096 17631123 0 0 Deletion 27 FN244-S Chr11 23208034 23208034 0 0 Insertion 3 FN244-S Chr11 24321010 C-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN244-S Chr11 27150495 27150497 0 0 Deletion 2 FN244-S Chr11 6969230 7083645 0 0 Inversion 114415 LOC_Os11g12470 expressed protein FN244-S Chr11 6978292 7083653 0 0 Inversion 105361 FN244-S Chr11 7081471 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN244-S Chr12 18793399 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN244-S Chr12 23554923 23554925 0 0 Deletion 2 FN244-S Chr12 24857388 24857402 0 0 Deletion 14 LOC_Os12g40160 expressed protein FN244-S Chr2 19222109 19222114 0 0 Deletion 5 FN244-S Chr2 31769239 31769239 0 0 Insertion 1 FN244-S Chr2 5471417 C-T 0 0 Single Base Substitution 0 INTRON HET FN244-S Chr3 15822283 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN244-S Chr3 22034501 C-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN244-S Chr3 22960615 22960630 0 0 Deletion 15 FN244-S Chr3 4168990 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN244-S Chr3 5720334 5720339 0 0 Deletion 5 FN244-S Chr4 20031884 20031884 0 0 Insertion 3 FN244-S Chr4 20462730 20462739 0 0 Deletion 9 LOC_Os04g33780 OTU-like cysteine protease family protein, putative, expressed FN244-S Chr4 304714 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os04g01439 retrotransposon protein, putative, unclassified, expressed FN244-S Chr4 31813302 31813320 0 0 Deletion 18 FN244-S Chr5 11356667 11356679 0 0 Deletion 12 FN244-S Chr5 11363885 11363888 0 0 Deletion 3 FN244-S Chr5 13913215 13913222 0 0 Deletion 7 FN244-S Chr5 14292249 G-C 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN244-S Chr5 15602732 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN244-S Chr5 15602733 T-G 0 0 Single Base Substitution 0 INTERGENIC HET FN244-S Chr5 15602735 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN244-S Chr5 20964280 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN244-S Chr5 20964281 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN244-S Chr5 26198853 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g45100 anthocyanidin 5,3-O-glucosyltransferase, putative, expressed FN244-S Chr5 26282072 27040358 0 0 Inversion 758286 LOC_Os05g45280 protein of unknown function DUF502 domain containing protein, expressed FN244-S Chr5 29781798 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN244-S Chr5 872423 872423 0 0 Insertion 1 FN244-S Chr6 13868968 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os06g23730 retrotransposon, putative, centromere-specific FN244-S Chr6 14017837 A-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HOMO FN244-S Chr6 14929312 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN244-S Chr6 15361088 15361088 0 0 Insertion 1 FN244-S Chr6 201621 276983 0 0 Deletion 75362 LOC_Os06g01320 chromo domain containing protein, expressed FN244-S Chr6 201621 276983 0 0 Deletion 75362 LOC_Os06g01340 CCT/B-box zinc finger protein, putative, expressed FN244-S Chr6 201621 276983 0 0 Deletion 75362 LOC_Os06g01350 transferase family protein, putative, expressed FN244-S Chr6 201621 276983 0 0 Deletion 75362 LOC_Os06g01360 homogentisate 1,2-dioxygenase, putative, expressed FN244-S Chr6 201621 276983 0 0 Deletion 75362 LOC_Os06g01370 DNA-binding protein-related, putative, expressed FN244-S Chr6 201621 276983 0 0 Deletion 75362 LOC_Os06g01390 acyl-coenzyme A oxidase 1.2, peroxisomal, putative, expressed FN244-S Chr6 201621 276983 0 0 Deletion 75362 LOC_Os06g01400 glycyl-tRNA synthetase 2, chloroplast/mitochondrial precursor, putative, expressed FN244-S Chr6 201621 276983 0 0 Deletion 75362 LOC_Os06g01410 glutamine cyclotransferase precursor, putative, expressed FN244-S Chr6 201621 276983 0 0 Deletion 75362 LOC_Os06g01420 retrotransposon protein, putative, unclassified, expressed FN244-S Chr6 201621 276983 0 0 Deletion 75362 LOC_Os06g01430 retrotransposon protein, putative, unclassified, expressed FN244-S Chr6 201621 276983 0 0 Deletion 75362 LOC_Os06g01440 integral membrane protein, putative, expressed FN244-S Chr6 201621 276983 0 0 Deletion 75362 LOC_Os06g01450 methyltransferase, putative, expressed FN244-S Chr6 201621 276983 0 0 Deletion 75362 LOC_Os06g01460 expressed protein FN244-S Chr6 22103500 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN244-S Chr6 27369158 27369162 0 0 Deletion 4 LOC_Os06g45280 protein kinase APK1B, chloroplast precursor, putative, expressed FN244-S Chr6 28410834 28410835 0 0 Deletion 1 FN244-S Chr6 8570145 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN244-S Chr7 1574002 1574005 0 0 Deletion 3 FN244-S Chr8 13298 G-T 0 0 Single Base Substitution 0 INTRON HOMO FN244-S Chr8 863209 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN244-S Chr8 9931226 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN244-S Chr9 15955234 15955236 0 0 Deletion 2 FN244-S Chr9 6695975 6695975 0 0 Insertion 2