FN2441 Chr1 14437692 G-C 0 0 Single Base Substitution 0 HET FN2441 Chr1 15868687 T-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g28330 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2441 Chr1 19235984 19235985 0 0 Deletion 1 HET FN2441 Chr1 27480288 27480297 0 0 Deletion 9 Homo FN2441 Chr1 36315307 36315308 0 0 Deletion 1 frameshift_variant&splice_region_variant HET LOC_Os01g62710 transposon protein, putative, unclassified FN2441 Chr1 3723994 3723996 0 0 Insertion 2 HET FN2441 Chr1 43100387 C-T 0 0 Single Base Substitution 0 Homo FN2441 Chr1 9590198 C-T 0 0 Single Base Substitution 0 HET FN2441 Chr10 12102090 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os10g23190 transposon protein, putative, unclassified, expressed FN2441 Chr10 18550910 C-T 0 0 Single Base Substitution 0 Homo FN2441 Chr10 19663763 G-A 0 0 Single Base Substitution 0 Homo FN2441 Chr10 19790729 G-T 0 0 Single Base Substitution 0 Homo FN2441 Chr10 3662528 3662535 0 0 Deletion 7 HET FN2441 Chr10 6850713 6850714 0 0 Deletion 1 HET FN2441 Chr10 7145144 7145145 0 0 Deletion 1 HET FN2441 Chr10 9972147 A-T 0 0 Single Base Substitution 0 HET FN2441 Chr11 14765025 14765026 0 0 Deletion 1 Homo FN2441 Chr11 19055260 G-A 0 0 Single Base Substitution 0 Homo FN2441 Chr11 25145501 A-G 0 0 Single Base Substitution 0 HET FN2441 Chr11 5843012 G-A 0 0 Single Base Substitution 0 HET FN2441 Chr11 8617088 C-T 0 0 Single Base Substitution 0 HET FN2441 Chr12 19061786 C-T 0 0 Single Base Substitution 0 HET FN2441 Chr12 25965951 25965956 0 0 Deletion 5 HET FN2441 Chr12 27139688 G-A 0 0 Single Base Substitution 0 HET FN2441 Chr12 4601506 G-A 0 0 Single Base Substitution 0 HET FN2441 Chr12 7581226 7581227 0 0 Deletion 1 HET FN2441 Chr12 8072219 A-T 0 0 Single Base Substitution 0 HET FN2441 Chr12 8072224 T-A 0 0 Single Base Substitution 0 HET FN2441 Chr12 8961526 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g15680 laccase precursor protein, putative, expressed FN2441 Chr2 1944533 A-G 0 0 Single Base Substitution 0 HET FN2441 Chr2 1970278 C-T 0 0 Single Base Substitution 0 HET FN2441 Chr2 31874470 G-C 0 0 Single Base Substitution 0 HET FN2441 Chr2 7237065 7237066 0 0 Deletion 1 HET FN2441 Chr3 1383785 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os03g03240 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2441 Chr3 16176870 G-C 0 0 Single Base Substitution 0 HET FN2441 Chr4 1603766 G-A 0 0 Single Base Substitution 0 HET FN2441 Chr4 2440021 2440022 0 0 Deletion 1 Homo FN2441 Chr4 25099813 T-A 0 0 Single Base Substitution 0 HET FN2441 Chr4 25736485 G-C 0 0 Single Base Substitution 0 HET FN2441 Chr4 7262068 C-T 0 0 Single Base Substitution 0 Homo FN2441 Chr5 10402377 G-T 0 0 Single Base Substitution 0 HET FN2441 Chr5 1638972 G-A 0 0 Single Base Substitution 0 HET FN2441 Chr5 24439217 24439226 0 0 Deletion 9 HET FN2441 Chr5 26834717 26834725 0 0 Deletion 8 HET FN2441 Chr5 27245779 27245798 0 0 Deletion 19 frameshift_variant Homo LOC_Os05g47560 serine/threonine-protein kinase SNT7, chloroplast precursor, putative, expressed FN2441 Chr5 27248037 T-A 0 0 Single Base Substitution 0 Homo FN2441 Chr5 29949779 29949786 0 0 Insertion 7 HET FN2441 Chr6 13155201 G-A 0 0 Single Base Substitution 0 HET FN2441 Chr6 13662313 G-T 0 0 Single Base Substitution 0 HET FN2441 Chr6 14939608 14939611 0 0 Deletion 3 inframe_deletion HET LOC_Os06g25550 retrotransposon protein, putative, unclassified, expressed FN2441 Chr6 15557069 15557072 0 0 Deletion 3 inframe_deletion HET LOC_Os06g27480 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2441 Chr6 16087209 G-A 0 0 Single Base Substitution 0 HET FN2441 Chr6 16930105 16930106 0 0 Deletion 1 HET FN2441 Chr6 19359422 19359429 0 0 Deletion 7 HET FN2441 Chr6 25457261 25457270 0 0 Deletion 9 Homo FN2441 Chr6 29960994 A-G 0 0 Single Base Substitution 0 Homo FN2441 Chr6 30421312 G-A 0 0 Single Base Substitution 0 HET FN2441 Chr6 31207358 A-G 0 0 Single Base Substitution 0 Homo FN2441 Chr7 11438518 11438528 0 0 Deletion 10 Homo FN2441 Chr7 13578981 T-C 0 0 Single Base Substitution 0 Homo FN2441 Chr7 15079018 G-A 0 0 Single Base Substitution 0 HET FN2441 Chr7 15336150 A-T 0 0 Single Base Substitution 0 Homo FN2441 Chr7 15428325 T-A 0 0 Single Base Substitution 0 Homo FN2441 Chr7 15495001 15545000 0 0 Deletion 49999 LOC_Os07g26810 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2441 Chr7 15495001 15545000 0 0 Deletion 49999 LOC_Os07g26820 retrotransposon protein, putative, Ty3-gypsy subclass FN2441 Chr7 15495001 15545000 0 0 Deletion 49999 LOC_Os07g26830 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2441 Chr7 15495001 15545000 0 0 Deletion 49999 LOC_Os07g26840 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2441 Chr7 15495001 15545000 0 0 Deletion 49999 LOC_Os07g26850 retrotransposon protein, putative, unclassified, expressed FN2441 Chr7 15495001 15545000 0 0 Deletion 49999 LOC_Os07g26860 expressed protein FN2441 Chr7 16342973 16342979 0 0 Deletion 6 Homo FN2441 Chr7 16794992 G-A 0 0 Single Base Substitution 0 Homo FN2441 Chr7 18157010 G-A 0 0 Single Base Substitution 0 HET FN2441 Chr7 24624194 24624201 0 0 Deletion 7 frameshift_variant Homo LOC_Os07g41140 receptor-like protein kinase precursor, putative, expressed FN2441 Chr7 25591487 25591495 0 0 Deletion 8 HET FN2441 Chr7 29381667 A-G 0 0 Single Base Substitution 0 HET FN2441 Chr7 3791409 3791421 0 0 Deletion 12 Homo FN2441 Chr8 19835415 T-C 0 0 Single Base Substitution 0 Homo FN2441 Chr8 6075075 Chr5 8208599 0 Translocation 0 LOC_Os05g14510 retrotransposon protein, putative, unclassified, expressed FN2441 Chr8 6075075 Chr5 8208599 0 Translocation 0 LOC_Os08g10360 retrotransposon protein, putative, unclassified, expressed FN2441 Chr8 7980855 T-C 0 0 Single Base Substitution 0 Homo FN2441 Chr9 13363862 C-T 0 0 Single Base Substitution 0 HET FN2441 Chr9 18909839 18909840 0 0 Deletion 1 HET FN2441 Chr9 21585167 C-A 0 0 Single Base Substitution 0 Homo FN2441 Chr9 2246368 2246373 0 0 Insertion 5 HET