FN2447 Chr1 10469805 G-A 0 0 Single Base Substitution 0 HET FN2447 Chr1 15371014 T-C 0 0 Single Base Substitution 0 Homo FN2447 Chr1 25346774 25346775 0 0 Deletion 1 HET FN2447 Chr1 30164205 C-G 0 0 Single Base Substitution 0 HET FN2447 Chr1 8003345 8003347 0 0 Deletion 2 Homo FN2447 Chr10 1318804 G-A 0 0 Single Base Substitution 0 Homo FN2447 Chr10 1318805 T-A 0 0 Single Base Substitution 0 Homo FN2447 Chr10 1319393 Chr7 15378398 0 Translocation 0 LOC_Os10g03120 retrotransposon protein, putative, unclassified, expressed FN2447 Chr10 1319408 Chr8 23191596 0 Translocation 0 LOC_Os10g03120 retrotransposon protein, putative, unclassified, expressed FN2447 Chr10 20699822 T-C 0 0 Single Base Substitution 0 HET FN2447 Chr10 6546271 6546273 0 0 Insertion 2 HET FN2447 Chr10 6853144 G-T 0 0 Single Base Substitution 0 HET FN2447 Chr10 6936260 Chr5 10740005 0 Translocation 0 FN2447 Chr11 14950005 G-C 0 0 Single Base Substitution 0 HET FN2447 Chr11 26549409 T-C 0 0 Single Base Substitution 0 HET FN2447 Chr11 4460880 4460891 0 0 Deletion 11 Homo FN2447 Chr11 4481011 Chr7 3915226 0 Translocation 0 FN2447 Chr11 4481011 Chr7 3915226 0 Translocation 0 LOC_Os07g07820 expressed protein FN2447 Chr12 11951427 G-T 0 0 Single Base Substitution 0 HET FN2447 Chr2 19392371 Chr1 3094279 0 Translocation 0 FN2447 Chr2 22934718 C-T 0 0 Single Base Substitution 0 HET FN2447 Chr2 23908283 Chr1 17070387 0 Translocation 0 FN2447 Chr2 23908283 Chr1 17070387 0 Translocation 0 LOC_Os01g31220 expressed protein FN2447 Chr2 27737101 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os02g45590 PPR repeat domain containing protein, putative, expressed FN2447 Chr2 33237569 A-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os02g54210 retrotransposon protein, putative, unclassified, expressed FN2447 Chr2 4110411 T-G 0 0 Single Base Substitution 0 HET FN2447 Chr2 4287066 C-A 0 0 Single Base Substitution 0 HET FN2447 Chr2 5394411 G-A 0 0 Single Base Substitution 0 HET FN2447 Chr2 5398017 T-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os02g10280 transposon protein, putative, unclassified, expressed FN2447 Chr2 5398018 C-A 0 0 Single Base Substitution 0 STOP_GAINED HET LOC_Os02g10280 transposon protein, putative, unclassified, expressed FN2447 Chr3 15806739 C-T 0 0 Single Base Substitution 0 HET FN2447 Chr3 29005749 T-C 0 0 Single Base Substitution 0 HET FN2447 Chr3 30377951 C-G 0 0 Single Base Substitution 0 HET FN2447 Chr3 41200 G-A 0 0 Single Base Substitution 0 HET FN2447 Chr4 10700879 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g19260 retrotransposon protein, putative, unclassified, expressed FN2447 Chr4 12788948 G-T 0 0 Single Base Substitution 0 HET FN2447 Chr4 14365534 A-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g24940 expressed protein FN2447 Chr4 1498360 G-T 0 0 Single Base Substitution 0 HET FN2447 Chr4 1498361 G-A 0 0 Single Base Substitution 0 HET FN2447 Chr4 1499001 1915000 0 0 Deletion 415999 LOC_Os04g03470 retrotransposon protein, putative, unclassified, expressed FN2447 Chr4 1499001 1915000 0 0 Deletion 415999 LOC_Os04g03480 retrotransposon protein, putative, unclassified, expressed FN2447 Chr4 1499001 1915000 0 0 Deletion 415999 LOC_Os04g03490 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2447 Chr4 1499001 1915000 0 0 Deletion 415999 LOC_Os04g03510 expressed protein FN2447 Chr4 1499001 1915000 0 0 Deletion 415999 LOC_Os04g03520 expressed protein FN2447 Chr4 1499001 1915000 0 0 Deletion 415999 LOC_Os04g03530 cysteine-rich receptor-like protein kinase 37 precursor, putative, expressed FN2447 Chr4 1499001 1915000 0 0 Deletion 415999 LOC_Os04g03550 retrotransposon protein, putative, unclassified, expressed FN2447 Chr4 1499001 1915000 0 0 Deletion 415999 LOC_Os04g03560 retrotransposon protein, putative, unclassified, expressed FN2447 Chr4 1499001 1915000 0 0 Deletion 415999 LOC_Os04g03579 protein kinase, putative, expressed FN2447 Chr4 1499001 1915000 0 0 Deletion 415999 LOC_Os04g03600 retrotransposon protein, putative, unclassified, expressed FN2447 Chr4 1499001 1915000 0 0 Deletion 415999 LOC_Os04g03610 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2447 Chr4 1499001 1915000 0 0 Deletion 415999 LOC_Os04g03620 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2447 Chr4 1499001 1915000 0 0 Deletion 415999 LOC_Os04g03630 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2447 Chr4 1499001 1915000 0 0 Deletion 415999 LOC_Os04g03640 retrotransposon protein, putative, Ty1-copia subclass FN2447 Chr4 1499001 1915000 0 0 Deletion 415999 LOC_Os04g03650 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2447 Chr4 1499001 1915000 0 0 Deletion 415999 LOC_Os04g03660 expressed protein FN2447 Chr4 1499001 1915000 0 0 Deletion 415999 LOC_Os04g03680 transposon protein, putative, CACTA, En/Spm sub-class FN2447 Chr4 1499001 1915000 0 0 Deletion 415999 LOC_Os04g03690 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2447 Chr4 1499001 1915000 0 0 Deletion 415999 LOC_Os04g03700 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2447 Chr4 1499001 1915000 0 0 Deletion 415999 LOC_Os04g03710 OsSub36 - Putative Subtilisin homologue, expressed FN2447 Chr4 1499001 1915000 0 0 Deletion 415999 LOC_Os04g03720 retrotransposon protein, putative, unclassified, expressed FN2447 Chr4 1499001 1915000 0 0 Deletion 415999 LOC_Os04g03730 retrotransposon protein, putative, unclassified, expressed FN2447 Chr4 1499001 1915000 0 0 Deletion 415999 LOC_Os04g03740 expressed protein FN2447 Chr4 1499001 1915000 0 0 Deletion 415999 LOC_Os04g03760 expressed protein FN2447 Chr4 1499001 1915000 0 0 Deletion 415999 LOC_Os04g03780 retrotransposon protein, putative, unclassified FN2447 Chr4 1499001 1915000 0 0 Deletion 415999 LOC_Os04g03790 retrotransposon protein, putative, unclassified, expressed FN2447 Chr4 1499001 1915000 0 0 Deletion 415999 LOC_Os04g03796 OsSub37 - Putative Subtilisin homologue, expressed FN2447 Chr4 1499001 1915000 0 0 Deletion 415999 LOC_Os04g03810 OsSub38 - Putative Subtilisin homologue, expressed FN2447 Chr4 1499001 1915000 0 0 Deletion 415999 LOC_Os04g03820 expressed protein FN2447 Chr4 1499001 1915000 0 0 Deletion 415999 LOC_Os04g03830 OsWAK29 - OsWAK receptor-like protein kinase, expressed FN2447 Chr4 1499001 1915000 0 0 Deletion 415999 LOC_Os04g03840 retrotransposon protein, putative, unclassified FN2447 Chr4 1499001 1915000 0 0 Deletion 415999 LOC_Os04g03850 OsSub39 - Putative Subtilisin homologue, expressed FN2447 Chr4 1499001 1915000 0 0 Deletion 415999 LOC_Os04g03860 expressed protein FN2447 Chr4 1499001 1915000 0 0 Deletion 415999 LOC_Os04g03870 cytochrome P450, putative, expressed FN2447 Chr4 1499001 1915000 0 0 Deletion 415999 LOC_Os04g03880 expressed protein FN2447 Chr4 1499001 1915000 0 0 Deletion 415999 LOC_Os04g03884 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2447 Chr4 1499001 1915000 0 0 Deletion 415999 LOC_Os04g03890 cytochrome P450, putative, expressed FN2447 Chr4 1499001 1915000 0 0 Deletion 415999 LOC_Os04g03910 expressed protein FN2447 Chr4 1499001 1915000 0 0 Deletion 415999 LOC_Os04g03920 expressed protein FN2447 Chr4 1499001 1915000 0 0 Deletion 415999 LOC_Os04g03930 expressed protein FN2447 Chr4 1499001 1915000 0 0 Deletion 415999 LOC_Os04g03940 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2447 Chr4 1499001 1915000 0 0 Deletion 415999 LOC_Os04g03950 retrotransposon protein, putative, unclassified, expressed FN2447 Chr4 1499001 1915000 0 0 Deletion 415999 LOC_Os04g03960 hypothetical protein FN2447 Chr4 1499001 1915000 0 0 Deletion 415999 LOC_Os04g03970 hypothetical protein FN2447 Chr4 1499001 1915000 0 0 Deletion 415999 LOC_Os04g03980 flavin monooxygenase, putative, expressed FN2447 Chr4 1499001 1915000 0 0 Deletion 415999 LOC_Os04g03990 3-5 exonuclease domain-containing protein, putative, expressed FN2447 Chr4 1499001 1915000 0 0 Deletion 415999 LOC_Os04g04000 ECT protein, putative, expressed FN2447 Chr4 1499001 1915000 0 0 Deletion 415999 LOC_Os04g04010 expressed protein FN2447 Chr4 1499001 1915000 0 0 Deletion 415999 LOC_Os04g04020 protein transport protein Sec24-like, putative, expressed FN2447 Chr4 1499001 1915000 0 0 Deletion 415999 LOC_Os04g04030 expressed protein FN2447 Chr4 1499001 1915000 0 0 Deletion 415999 LOC_Os04g04040 expressed protein FN2447 Chr4 1499001 1915000 0 0 Deletion 415999 LOC_Os04g04050 expressed protein FN2447 Chr4 1499001 1915000 0 0 Deletion 415999 LOC_Os04g04060 dynamin family protein, putative, expressed FN2447 Chr4 1499001 1915000 0 0 Deletion 415999 LOC_Os04g04070 expressed protein FN2447 Chr4 1499001 1915000 0 0 Deletion 415999 LOC_Os04g04080 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2447 Chr4 1499001 1915000 0 0 Deletion 415999 LOC_Os04g04100 hypothetical protein FN2447 Chr4 1499001 1915000 0 0 Deletion 415999 LOC_Os04g04120 retrotransposon protein, putative, Ty1-copia subclass, expressed FN2447 Chr4 1499001 1915000 0 0 Deletion 415999 LOC_Os04g04130 retrotransposon protein, putative, unclassified FN2447 Chr4 31485785 31485796 0 0 Deletion 11 frameshift_variant&stop_lost Homo LOC_Os04g52870 OsFBW1 - F-box domain and WD40 repeat containing protein, expressed FN2447 Chr4 5028150 C-A 0 0 Single Base Substitution 0 SPLICE_SITE_ACCEPTOR HET LOC_Os04g09410 transposon protein, putative, unclassified, expressed FN2447 Chr5 21940130 21940139 0 0 Deletion 9 Homo FN2447 Chr5 8418318 T-C 0 0 Single Base Substitution 0 HET FN2447 Chr6 12362990 G-A 0 0 Single Base Substitution 0 Homo FN2447 Chr6 12509175 G-A 0 0 Single Base Substitution 0 HET FN2447 Chr6 17198894 C-A 0 0 Single Base Substitution 0 HET FN2447 Chr6 20111080 20111083 0 0 Deletion 3 Homo FN2447 Chr6 27006766 G-A 0 0 Single Base Substitution 0 HET FN2447 Chr6 5213412 5213415 0 0 Deletion 3 HET FN2447 Chr6 6756353 T-C 0 0 Single Base Substitution 0 HET FN2447 Chr7 22241223 22241225 0 0 Insertion 2 HET FN2447 Chr7 8590780 C-T 0 0 Single Base Substitution 0 HET FN2447 Chr8 17398135 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os08g28500 retrotransposon protein, putative, unclassified, expressed FN2447 Chr8 23191335 23414655 0 0 Inversion 0 FN2447 Chr8 23191343 Chr7 15377210 0 Translocation 0 FN2447 Chr8 23191343 Chr7 15377210 0 Translocation 0 LOC_Os07g26660 aquaporin protein, putative, expressed FN2447 Chr8 23191600 23449775 0 0 Inversion 0 FN2447 Chr8 23191600 23449775 0 0 Inversion 0 LOC_Os08g37104 expressed protein FN2447 Chr8 23412001 23450000 0 0 Deletion 37999 LOC_Os08g37040 gibberellin receptor GID1L2, putative, expressed FN2447 Chr8 23412001 23450000 0 0 Deletion 37999 LOC_Os08g37050 gibberellin receptor GID1L2, putative, expressed FN2447 Chr8 23412001 23450000 0 0 Deletion 37999 LOC_Os08g37060 gibberellin receptor GID1L2, putative, expressed FN2447 Chr8 23412001 23450000 0 0 Deletion 37999 LOC_Os08g37070 expressed protein FN2447 Chr8 23412001 23450000 0 0 Deletion 37999 LOC_Os08g37080 expressed protein FN2447 Chr8 23412001 23450000 0 0 Deletion 37999 LOC_Os08g37090 expressed protein FN2447 Chr8 23412001 23450000 0 0 Deletion 37999 LOC_Os08g37104 expressed protein FN2447 Chr8 6096116 C-T 0 0 Single Base Substitution 0 Homo FN2447 Chr9 11860552 11860554 0 0 Deletion 2 frameshift_variant HET LOC_Os09g19810 retrotransposon protein, putative, unclassified, expressed FN2447 Chr9 12189637 C-T 0 0 Single Base Substitution 0 HET FN2447 Chr9 16719953 T-C 0 0 Single Base Substitution 0 HET FN2447 Chr9 19383733 T-C 0 0 Single Base Substitution 0 HET FN2447 Chr9 21181603 21181605 0 0 Deletion 2 HET FN2447 Chr9 3988989 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os09g07850 retrotransposon protein, putative, unclassified, expressed