FN2452 Chr1 10360688 A-G 0 0 Single Base Substitution 0 HET FN2452 Chr1 20090830 C-T 0 0 Single Base Substitution 0 HET FN2452 Chr1 22749517 G-A 0 0 Single Base Substitution 0 HET FN2452 Chr1 32947803 32947804 0 0 Deletion 1 HET FN2452 Chr1 33599429 T-C 0 0 Single Base Substitution 0 HET FN2452 Chr1 35934616 35934617 0 0 Insertion 1 HET FN2452 Chr1 38468444 38468447 0 0 Deletion 3 HET FN2452 Chr1 42419371 A-T 0 0 Single Base Substitution 0 HET FN2452 Chr1 9881903 T-C 0 0 Single Base Substitution 0 HET FN2452 Chr10 13034481 C-G 0 0 Single Base Substitution 0 HET FN2452 Chr10 15337863 T-G 0 0 Single Base Substitution 0 Homo FN2452 Chr10 20175409 G-A 0 0 Single Base Substitution 0 HET FN2452 Chr11 10766852 10766859 0 0 Deletion 7 Homo FN2452 Chr11 18508361 Chr1 40950870 0 Translocation 0 FN2452 Chr11 28735088 28742562 0 0 Inversion 0 FN2452 Chr11 28735100 28742577 0 0 Inversion 0 FN2452 Chr11 8192261 G-A 0 0 Single Base Substitution 0 HET FN2452 Chr12 10764333 T-G 0 0 Single Base Substitution 0 HET FN2452 Chr12 10764335 A-G 0 0 Single Base Substitution 0 HET FN2452 Chr12 11208614 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g19330 expressed protein FN2452 Chr12 17939791 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g30000 expressed protein FN2452 Chr12 21950911 G-T 0 0 Single Base Substitution 0 HET FN2452 Chr12 21950912 G-T 0 0 Single Base Substitution 0 HET FN2452 Chr12 26004785 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g41950 auxin response factor, putative, expressed FN2452 Chr12 8057118 8057119 0 0 Deletion 1 HET FN2452 Chr2 22691733 C-T 0 0 Single Base Substitution 0 HET FN2452 Chr2 25938001 25971000 0 0 Deletion 32999 LOC_Os02g43070 retrotransposon protein, putative, unclassified, expressed FN2452 Chr2 25938001 25971000 0 0 Deletion 32999 LOC_Os02g43080 PPR repeat domain containing protein, putative, expressed FN2452 Chr2 25938001 25971000 0 0 Deletion 32999 LOC_Os02g43090 myristoyl-acyl carrier protein thioesterase, chloroplast precursor, putative, expressed FN2452 Chr2 25938001 25971000 0 0 Deletion 32999 LOC_Os02g43100 expressed protein FN2452 Chr2 25938001 25971000 0 0 Deletion 32999 LOC_Os02g43110 sodium/calcium exchanger 1 precursor, putative, expressed FN2452 Chr2 25938001 25971000 0 0 Deletion 32999 LOC_Os02g43120 zinc finger, C3HC4 type domain containing protein, expressed FN2452 Chr2 30561012 30793725 0 0 Inversion 0 FN2452 Chr2 30561012 30793725 0 0 Inversion 0 LOC_Os02g50440 retrotransposon protein, putative, unclassified, expressed FN2452 Chr2 30561017 30793727 0 0 Inversion 0 FN2452 Chr2 30561017 30793727 0 0 Inversion 0 LOC_Os02g50440 retrotransposon protein, putative, unclassified, expressed FN2452 Chr2 6183740 6486965 0 0 Inversion 0 LOC_Os02g11930 receptor-like protein kinase precursor, putative, expressed FN2452 Chr2 6183773 6486969 0 0 Inversion 0 LOC_Os02g11930 receptor-like protein kinase precursor, putative, expressed FN2452 Chr2 6497782 C-A 0 0 Single Base Substitution 0 Homo FN2452 Chr3 10462115 10462119 0 0 Deletion 4 Homo FN2452 Chr3 11555474 A-G 0 0 Single Base Substitution 0 HET FN2452 Chr3 11966523 T-C 0 0 Single Base Substitution 0 HET FN2452 Chr3 14189685 C-T 0 0 Single Base Substitution 0 HET FN2452 Chr3 20810676 20810677 0 0 Deletion 1 frameshift_variant HET LOC_Os03g37500 retrotransposon protein, putative, unclassified, expressed FN2452 Chr3 22563808 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g40580 retrotransposon protein, putative, unclassified, expressed FN2452 Chr3 29564652 29564683 0 0 Deletion 31 frameshift_variant&splice_acceptor_variant&splice_region_variant&intron_variant Homo LOC_Os03g51650 membrane protein, putative, expressed FN2452 Chr3 32464514 32464524 0 0 Deletion 10 Homo FN2452 Chr4 13091032 A-G 0 0 Single Base Substitution 0 Homo FN2452 Chr4 24047262 24047268 0 0 Deletion 6 Homo FN2452 Chr4 32717800 A-T 0 0 Single Base Substitution 0 HET FN2452 Chr5 12281844 G-A 0 0 Single Base Substitution 0 HET FN2452 Chr5 14888315 C-G 0 0 Single Base Substitution 0 HET FN2452 Chr5 17555013 G-T 0 0 Single Base Substitution 0 HET FN2452 Chr5 722618 Chr3 28717930 0 Translocation 0 FN2452 Chr5 7461001 7502000 0 0 Deletion 40999 LOC_Os05g13450 retrotransposon protein, putative, unclassified, expressed FN2452 Chr5 7461001 7502000 0 0 Deletion 40999 LOC_Os05g13460 retrotransposon protein, putative, unclassified, expressed FN2452 Chr5 7461001 7502000 0 0 Deletion 40999 LOC_Os05g13470 retrotransposon protein, putative, unclassified, expressed FN2452 Chr5 7461001 7502000 0 0 Deletion 40999 LOC_Os05g13480 S-adenosylmethionine decarboxylase proenzyme, putative, expressed FN2452 Chr5 7461001 7502000 0 0 Deletion 40999 LOC_Os05g13490 BURP domain containing protein, expressed FN2452 Chr5 7461001 7502000 0 0 Deletion 40999 LOC_Os05g13500 expressed protein FN2452 Chr5 7461001 7502000 0 0 Deletion 40999 LOC_Os05g13510 retrotransposon protein, putative, unclassified, expressed FN2452 Chr5 7461001 7502000 0 0 Deletion 40999 LOC_Os05g13520 white-brown complex homolog protein 12, putative, expressed FN2452 Chr5 7461001 7502000 0 0 Deletion 40999 LOC_Os05g13530 expressed protein FN2452 Chr6 11273106 T-G 0 0 Single Base Substitution 0 Homo FN2452 Chr6 13673833 Chr4 16289938 0 Translocation 0 FN2452 Chr6 14048013 A-T 0 0 Single Base Substitution 0 Homo FN2452 Chr6 1814137 T-A 0 0 Single Base Substitution 0 HET FN2452 Chr6 6074566 6074567 0 0 Deletion 1 HET FN2452 Chr7 11637953 Chr4 9582176 0 Translocation 0 FN2452 Chr7 11637953 Chr4 9582176 0 Translocation 0 LOC_Os04g17510 retrotransposon protein, putative, unclassified, expressed FN2452 Chr7 15649343 15649350 0 0 Deletion 7 Homo FN2452 Chr7 19762409 G-A 0 0 Single Base Substitution 0 Homo FN2452 Chr7 20759009 G-A 0 0 Single Base Substitution 0 Homo FN2452 Chr7 23620936 23620937 0 0 Deletion 1 Homo FN2452 Chr7 26611277 C-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os07g44560 AMP-binding domain containing protein, expressed FN2452 Chr7 26747964 26747982 0 0 Deletion 18 HET FN2452 Chr7 29422504 G-A 0 0 Single Base Substitution 0 HET FN2452 Chr7 29422508 G-A 0 0 Single Base Substitution 0 HET FN2452 Chr7 3445866 G-A 0 0 Single Base Substitution 0 Homo FN2452 Chr8 12468001 12666000 0 0 Deletion 197999 LOC_Os08g20770 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2452 Chr8 12468001 12666000 0 0 Deletion 197999 LOC_Os08g20780 retrotransposon protein, putative, Ty3-gypsy subclass FN2452 Chr8 12468001 12666000 0 0 Deletion 197999 LOC_Os08g20790 retrotransposon protein, putative, Ty3-gypsy subclass FN2452 Chr8 12468001 12666000 0 0 Deletion 197999 LOC_Os08g20800 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2452 Chr8 12468001 12666000 0 0 Deletion 197999 LOC_Os08g20820 transposon protein, putative, unclassified FN2452 Chr8 12468001 12666000 0 0 Deletion 197999 LOC_Os08g20830 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2452 Chr8 12468001 12666000 0 0 Deletion 197999 LOC_Os08g20840 retrotransposon protein, putative, Ty3-gypsy subclass FN2452 Chr8 12468001 12666000 0 0 Deletion 197999 LOC_Os08g20849 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2452 Chr8 12468001 12666000 0 0 Deletion 197999 LOC_Os08g20870 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2452 Chr8 12468001 12666000 0 0 Deletion 197999 LOC_Os08g20885 retrotransposon protein, putative, Ty3-gypsy subclass FN2452 Chr8 12468001 12666000 0 0 Deletion 197999 LOC_Os08g20922 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2452 Chr8 12468001 12666000 0 0 Deletion 197999 LOC_Os08g20937 retrotransposon, putative, centromere-specific FN2452 Chr8 12468001 12666000 0 0 Deletion 197999 LOC_Os08g20952 retrotransposon protein, putative, unclassified FN2452 Chr8 12468001 12666000 0 0 Deletion 197999 LOC_Os08g20967 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2452 Chr8 12468001 12666000 0 0 Deletion 197999 LOC_Os08g20982 retrotransposon protein, putative, unclassified, expressed FN2452 Chr8 12468001 12666000 0 0 Deletion 197999 LOC_Os08g21000 retrotransposon protein, putative, unclassified, expressed FN2452 Chr8 12468001 12666000 0 0 Deletion 197999 LOC_Os08g21020 retrotransposon protein, putative, unclassified, expressed FN2452 Chr8 12468001 12666000 0 0 Deletion 197999 LOC_Os08g21030 retrotransposon protein, putative, unclassified FN2452 Chr8 12468001 12666000 0 0 Deletion 197999 LOC_Os08g21050 retrotransposon protein, putative, Ty3-gypsy subclass FN2452 Chr8 12468001 12666000 0 0 Deletion 197999 LOC_Os08g21060 retrotransposon protein, putative, unclassified, expressed FN2452 Chr8 12468001 12666000 0 0 Deletion 197999 LOC_Os08g21080 hypothetical protein FN2452 Chr8 12468001 12666000 0 0 Deletion 197999 LOC_Os08g21100 retrotransposon protein, putative, unclassified FN2452 Chr8 12468001 12666000 0 0 Deletion 197999 LOC_Os08g21110 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2452 Chr8 12468001 12666000 0 0 Deletion 197999 LOC_Os08g21124 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2452 Chr8 12468001 12666000 0 0 Deletion 197999 LOC_Os08g21140 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2452 Chr8 12468001 12666000 0 0 Deletion 197999 LOC_Os08g21170 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2452 Chr8 12468001 12666000 0 0 Deletion 197999 LOC_Os08g21180 maSp2a, putative, expressed FN2452 Chr8 12468001 12666000 0 0 Deletion 197999 LOC_Os08g21190 retrotransposon protein, putative, unclassified FN2452 Chr8 12468001 12666000 0 0 Deletion 197999 LOC_Os08g21200 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2452 Chr8 12468001 12666000 0 0 Deletion 197999 LOC_Os08g21210 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2452 Chr8 13925966 C-G 0 0 Single Base Substitution 0 Homo FN2452 Chr8 15518952 Chr5 6364271 0 Translocation 0 FN2452 Chr8 15518953 Chr4 16098478 0 Translocation 0 FN2452 Chr8 20764814 20764816 0 0 Deletion 2 HET FN2452 Chr8 21593111 A-C 0 0 Single Base Substitution 0 HET FN2452 Chr8 22391725 C-A 0 0 Single Base Substitution 0 HET FN2452 Chr8 25965225 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os08g41070 retrotransposon protein, putative, unclassified, expressed FN2452 Chr8 26840600 26840602 0 0 Deletion 2 HET FN2452 Chr8 26842260 T-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os08g42470 BEE 1, putative, expressed FN2452 Chr8 451907 C-T 0 0 Single Base Substitution 0 HET FN2452 Chr8 8472142 A-T 0 0 Single Base Substitution 0 Homo FN2452 Chr9 10940325 C-T 0 0 Single Base Substitution 0 Homo FN2452 Chr9 7497551 C-G 0 0 Single Base Substitution 0 Homo