FN2456 Chr1 1057849 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g02900 glycosyltransferase, putative, expressed FN2456 Chr1 13405165 T-C 0 0 Single Base Substitution 0 HET FN2456 Chr1 2680370 C-T 0 0 Single Base Substitution 0 HET FN2456 Chr1 28254768 C-G 0 0 Single Base Substitution 0 HET FN2456 Chr1 28607668 28651372 0 0 Inversion 0 LOC_Os01g49820 lipid phosphatase protein, putative, expressed FN2456 Chr1 28607668 28651372 0 0 Inversion 0 LOC_Os01g49880 expressed protein FN2456 Chr1 28607680 28651378 0 0 Inversion 0 LOC_Os01g49820 lipid phosphatase protein, putative, expressed FN2456 Chr1 28607680 28651378 0 0 Inversion 0 LOC_Os01g49880 expressed protein FN2456 Chr1 40308970 40308971 0 0 Insertion 1 frameshift_variant HET LOC_Os01g69810 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2456 Chr1 4259261 4259262 0 0 Deletion 1 HET FN2456 Chr10 2761235 Chr1 26316013 0 Translocation 0 LOC_Os01g46280 expressed protein FN2456 Chr10 2761235 Chr1 26316013 0 Translocation 0 LOC_Os10g05560 expressed protein FN2456 Chr10 5747369 Chr5 13127961 0 Translocation 0 LOC_Os05g23010 retrotransposon protein, putative, Ty3-gypsy subclass FN2456 Chr10 5747369 Chr5 13127961 0 Translocation 0 LOC_Os10g10460 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2456 Chr11 14480752 G-A 0 0 Single Base Substitution 0 Homo FN2456 Chr11 16793691 G-A 0 0 Single Base Substitution 0 HET FN2456 Chr11 22392417 22392418 0 0 Deletion 1 HET FN2456 Chr11 26126640 26126641 0 0 Insertion 1 HET FN2456 Chr11 28719466 Chr8 25742774 0 Translocation 0 FN2456 Chr11 28719466 Chr8 25742774 0 Translocation 0 LOC_Os08g40650 senescence-induced receptor-like serine/threonine-protein kinase precursor, putative, expressed FN2456 Chr11 6236128 C-A 0 0 Single Base Substitution 0 HET FN2456 Chr12 15709312 C-T 0 0 Single Base Substitution 0 HET FN2456 Chr12 16899725 T-C 0 0 Single Base Substitution 0 HET FN2456 Chr12 5511820 C-T 0 0 Single Base Substitution 0 HET FN2456 Chr12 8261037 T-C 0 0 Single Base Substitution 0 HET FN2456 Chr2 13257420 13257435 0 0 Deletion 15 Homo FN2456 Chr2 18310657 G-A 0 0 Single Base Substitution 0 Homo FN2456 Chr2 19150315 A-T 0 0 Single Base Substitution 0 Homo FN2456 Chr2 32673594 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os02g53380 expressed protein FN2456 Chr2 34741461 G-T 0 0 Single Base Substitution 0 HET FN2456 Chr2 7516399 A-G 0 0 Single Base Substitution 0 HET FN2456 Chr3 11236907 11236913 0 0 Insertion 6 HET FN2456 Chr3 13171279 A-T 0 0 Single Base Substitution 0 HET FN2456 Chr3 17825902 T-G 0 0 Single Base Substitution 0 HET FN2456 Chr3 1838424 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os03g04030 HVA22, putative, expressed FN2456 Chr3 19208480 G-A 0 0 Single Base Substitution 0 HET FN2456 Chr3 25006039 G-T 0 0 Single Base Substitution 0 HET FN2456 Chr3 31965819 T-C 0 0 Single Base Substitution 0 HET FN2456 Chr3 8393856 G-C 0 0 Single Base Substitution 0 HET FN2456 Chr4 14669001 14730000 0 0 Deletion 60999 LOC_Os04g25360 tRNA methyltransferase complex GCD14 subunit, putative, expressed FN2456 Chr4 14669001 14730000 0 0 Deletion 60999 LOC_Os04g25370 cytokinin-O-glucosyltransferase 2, putative, expressed FN2456 Chr4 14669001 14730000 0 0 Deletion 60999 LOC_Os04g25380 cytokinin-O-glucosyltransferase 2, putative, expressed FN2456 Chr4 14669001 14730000 0 0 Deletion 60999 LOC_Os04g25400 uncharacterized protein all1601, putative, expressed FN2456 Chr4 14669001 14730000 0 0 Deletion 60999 LOC_Os04g25410 pentatricopeptide repeat domain containing protein, putative, expressed FN2456 Chr4 19045630 C-T 0 0 Single Base Substitution 0 Homo FN2456 Chr4 20613479 T-C 0 0 Single Base Substitution 0 Homo FN2456 Chr4 22178012 22178015 0 0 Deletion 3 HET FN2456 Chr4 23867807 23867814 0 0 Deletion 7 HET FN2456 Chr4 24300409 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os04g40930 MYB family transcription factor, putative, expressed FN2456 Chr4 28908060 T-C 0 0 Single Base Substitution 0 Homo FN2456 Chr4 30644821 A-T 0 0 Single Base Substitution 0 HET FN2456 Chr4 9224469 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g16850 retrotransposon, putative, centromere-specific, expressed FN2456 Chr5 13876903 G-A 0 0 Single Base Substitution 0 HET FN2456 Chr5 14880853 G-A 0 0 Single Base Substitution 0 HET FN2456 Chr5 20063974 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g33980 retrotransposon protein, putative, unclassified, expressed FN2456 Chr5 20369899 T-A 0 0 Single Base Substitution 0 HET FN2456 Chr6 1281097 G-A 0 0 Single Base Substitution 0 HET FN2456 Chr6 25778143 G-A 0 0 Single Base Substitution 0 Homo FN2456 Chr7 11077830 Chr4 29420496 0 Translocation 0 FN2456 Chr7 11077830 Chr4 29420496 0 Translocation 0 LOC_Os04g49290 retrotransposon protein, putative, unclassified, expressed FN2456 Chr7 13890993 Chr4 15170551 0 Translocation 0 FN2456 Chr7 14426843 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os07g25240 transposon protein, putative, CACTA, En/Spm sub-class FN2456 Chr7 14567001 14583000 0 0 Deletion 15999 LOC_Os07g25450 histone-lysine N-methyltransferase, putative, expressed FN2456 Chr7 14567001 14583000 0 0 Deletion 15999 LOC_Os07g25460 ankyrin repeat domain containing protein, expressed FN2456 Chr7 18745419 G-T 0 0 Single Base Substitution 0 HET FN2456 Chr7 20942096 21295095 0 0 Inversion 0 FN2456 Chr7 20942106 21295107 0 0 Inversion 0 FN2456 Chr7 22718930 T-C 0 0 Single Base Substitution 0 HET FN2456 Chr7 22771291 Chr6 14580538 0 Translocation 0 FN2456 Chr7 22788045 C-T 0 0 Single Base Substitution 0 HET FN2456 Chr7 2395979 G-A 0 0 Single Base Substitution 0 Homo FN2456 Chr7 24413735 A-T 0 0 Single Base Substitution 0 HET FN2456 Chr7 26710332 G-T 0 0 Single Base Substitution 0 HET FN2456 Chr7 27623248 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os07g46300 expressed protein FN2456 Chr8 10148371 C-A 0 0 Single Base Substitution 0 HET FN2456 Chr8 16899200 16899206 0 0 Insertion 6 HET FN2456 Chr8 18631189 Chr7 16354719 0 Translocation 0 LOC_Os07g28050 retrotransposon protein, putative, unclassified, expressed FN2456 Chr8 18631189 Chr7 16354719 0 Translocation 0 LOC_Os08g30280 retrotransposon protein, putative, unclassified, expressed FN2456 Chr8 5122979 5122984 0 0 Deletion 5 Homo FN2456 Chr8 6901763 T-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os08g11780 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2456 Chr9 10309860 Chr4 1632054 0 Translocation 0 FN2456 Chr9 20564719 T-A 0 0 Single Base Substitution 0 HET FN2456 Chr9 5120391 Chr4 3943179 0 Translocation 0 FN2456 Chr9 5320642 5320644 0 0 Deletion 2 HET FN2456 Chr9 8057872 8057873 0 0 Insertion 1 frameshift_variant HET LOC_Os09g13750 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2456 Chr9 9765905 Chr2 6850978 0 Translocation 0