FN2478 Chr1 12181103 12181111 0 0 Deletion 8 Homo FN2478 Chr1 21365218 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g38140 retrotransposon protein, putative, unclassified, expressed FN2478 Chr1 22489257 T-C 0 0 Single Base Substitution 0 HET FN2478 Chr1 28087828 A-T 0 0 Single Base Substitution 0 HET FN2478 Chr1 28436562 C-G 0 0 Single Base Substitution 0 HET FN2478 Chr10 20519953 20519962 0 0 Deletion 9 disruptive_inframe_deletion Homo LOC_Os10g38402 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2478 Chr10 5484403 Chr2 14658145 0 Translocation 0 FN2478 Chr11 19296640 G-T 0 0 Single Base Substitution 0 HET FN2478 Chr11 23897473 23897495 0 0 Deletion 22 HET FN2478 Chr11 23984170 23984171 0 0 Deletion 1 Homo FN2478 Chr12 13820962 13820973 0 0 Deletion 11 frameshift_variant Homo LOC_Os12g24250 retrotransposon protein, putative, unclassified, expressed FN2478 Chr12 14101034 G-A 0 0 Single Base Substitution 0 HET FN2478 Chr12 15281474 A-G 0 0 Single Base Substitution 0 Homo FN2478 Chr12 15874444 15874476 0 0 Deletion 32 HET FN2478 Chr12 16544982 16544993 0 0 Deletion 11 Homo FN2478 Chr12 4332524 Chr1 25576624 0 Translocation 0 FN2478 Chr12 5535001 5575000 0 0 Deletion 39999 LOC_Os12g10440 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2478 Chr12 5535001 5575000 0 0 Deletion 39999 LOC_Os12g10450 expressed protein FN2478 Chr12 5535001 5575000 0 0 Deletion 39999 LOC_Os12g10460 rp1, putative FN2478 Chr12 5535001 5575000 0 0 Deletion 39999 LOC_Os12g10470 expressed protein FN2478 Chr12 5535001 5575000 0 0 Deletion 39999 LOC_Os12g10480 hypothetical protein FN2478 Chr12 5535001 5575000 0 0 Deletion 39999 LOC_Os12g10490 expressed protein FN2478 Chr12 5535001 5575000 0 0 Deletion 39999 LOC_Os12g10500 retrotransposon protein, putative, Ty1-copia subclass, expressed FN2478 Chr12 5535001 5575000 0 0 Deletion 39999 LOC_Os12g10510 expressed protein FN2478 Chr12 5535001 5575000 0 0 Deletion 39999 LOC_Os12g10520 OsMADS33 - MADS-box family gene with MIKCc type-box, expressed FN2478 Chr12 5577764 5596628 0 0 Inversion 0 FN2478 Chr12 7627036 7627045 0 0 Deletion 9 Homo FN2478 Chr2 21595143 A-C 0 0 Single Base Substitution 0 Homo FN2478 Chr2 29851020 G-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os02g48770 SAM dependent carboxyl methyltransferase, putative, expressed FN2478 Chr3 18253975 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g31910 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2478 Chr3 31831317 A-C 0 0 Single Base Substitution 0 HET FN2478 Chr3 33070629 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g58080 BT1 family protein, putative, expressed FN2478 Chr3 5852731 5878200 0 0 Inversion 0 FN2478 Chr3 5852731 5878200 0 0 Inversion 0 LOC_Os03g11420 Os3bglu6 - beta-glucosidase/beta-fucosidase/beta-galactosidase, expressed FN2478 Chr3 5853953 5878204 0 0 Inversion 0 LOC_Os03g11360 leucine rich repeat containing protein, expressed FN2478 Chr3 5853953 5878204 0 0 Inversion 0 LOC_Os03g11420 Os3bglu6 - beta-glucosidase/beta-fucosidase/beta-galactosidase, expressed FN2478 Chr3 5872414 A-T 0 0 Single Base Substitution 0 HET FN2478 Chr3 8720012 A-C 0 0 Single Base Substitution 0 HET FN2478 Chr4 11483185 11483189 0 0 Insertion 4 Homo FN2478 Chr4 15449110 G-T 0 0 Single Base Substitution 0 Homo FN2478 Chr4 4808982 Chr1 24525238 0 Translocation 0 FN2478 Chr4 7202386 A-T 0 0 Single Base Substitution 0 HET FN2478 Chr4 7958466 A-T 0 0 Single Base Substitution 0 Homo FN2478 Chr5 19983339 T-C 0 0 Single Base Substitution 0 HET FN2478 Chr5 20710182 A-G 0 0 Single Base Substitution 0 HET FN2478 Chr6 11873137 C-T 0 0 Single Base Substitution 0 HET FN2478 Chr6 12226975 G-C 0 0 Single Base Substitution 0 HET FN2478 Chr6 23364101 G-A 0 0 Single Base Substitution 0 HET FN2478 Chr6 25747083 25747084 0 0 Deletion 1 Homo FN2478 Chr6 30444801 C-T 0 0 Single Base Substitution 0 HET FN2478 Chr6 6519412 6519413 0 0 Deletion 1 HET FN2478 Chr6 6671542 6671543 0 0 Deletion 1 HET FN2478 Chr7 12486198 12486200 0 0 Insertion 2 HET FN2478 Chr7 14313151 C-T 0 0 Single Base Substitution 0 HET FN2478 Chr7 20239542 T-A 0 0 Single Base Substitution 0 HET FN2478 Chr8 11186460 A-G 0 0 Single Base Substitution 0 HET FN2478 Chr8 11665026 11665027 0 0 Deletion 1 Homo FN2478 Chr8 11740862 11740863 0 0 Deletion 1 Homo FN2478 Chr8 18391676 T-C 0 0 Single Base Substitution 0 Homo FN2478 Chr8 22029739 22029744 0 0 Deletion 5 HET FN2478 Chr9 11480415 G-A 0 0 Single Base Substitution 0 Homo FN2478 Chr9 20685566 20921358 0 0 Inversion 0 FN2478 Chr9 20685566 20921358 0 0 Inversion 0 LOC_Os09g36260 expressed protein FN2478 Chr9 20685592 20921374 0 0 Inversion 0 FN2478 Chr9 20685592 20921374 0 0 Inversion 0 LOC_Os09g36260 expressed protein FN2478 Chr9 20963152 T-C 0 0 Single Base Substitution 0 HET FN2478 Chr9 21674082 G-C 0 0 Single Base Substitution 0 HET FN2478 Chr9 22377116 C-T 0 0 Single Base Substitution 0 HET