FN2480 Chr1 14813532 14813541 0 0 Deletion 9 Homo FN2480 Chr1 18080373 C-T 0 0 Single Base Substitution 0 Homo FN2480 Chr1 1828265 1828269 0 0 Deletion 4 frameshift_variant Homo LOC_Os01g04150 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2480 Chr1 19383001 19450000 0 0 Deletion 66999 LOC_Os01g35030 MDR-like ABC transporter, putative, expressed FN2480 Chr1 19383001 19450000 0 0 Deletion 66999 LOC_Os01g35040 ZOS1-09 - C2H2 zinc finger protein, expressed FN2480 Chr1 19383001 19450000 0 0 Deletion 66999 LOC_Os01g35050 early-responsive to dehydration protein-related, putative, expressed FN2480 Chr1 19383001 19450000 0 0 Deletion 66999 LOC_Os01g35070 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2480 Chr1 19383001 19450000 0 0 Deletion 66999 LOC_Os01g35080 retrotransposon protein, putative, unclassified FN2480 Chr1 19383001 19450000 0 0 Deletion 66999 LOC_Os01g35090 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2480 Chr1 19383001 19450000 0 0 Deletion 66999 LOC_Os01g35100 zinc finger, C3HC4 type domain containing protein, expressed FN2480 Chr1 19383001 19450000 0 0 Deletion 66999 LOC_Os01g35110 expressed protein FN2480 Chr1 19383001 19450000 0 0 Deletion 66999 LOC_Os01g35120 zinc finger, C3HC4 type domain containing protein, expressed FN2480 Chr1 19383001 19450000 0 0 Deletion 66999 LOC_Os01g35140 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2480 Chr1 19383001 19450000 0 0 Deletion 66999 LOC_Os01g35149 hypothetical protein FN2480 Chr1 23123055 23123063 0 0 Deletion 8 Homo FN2480 Chr1 24052608 24052618 0 0 Deletion 10 frameshift_variant Homo LOC_Os01g42350 pleiotropic drug resistance protein, putative, expressed FN2480 Chr1 26692532 C-T 0 0 Single Base Substitution 0 Homo FN2480 Chr1 26692533 C-T 0 0 Single Base Substitution 0 Homo FN2480 Chr1 36752482 T-C 0 0 Single Base Substitution 0 Homo FN2480 Chr1 38988359 G-T 0 0 Single Base Substitution 0 HET FN2480 Chr1 7736439 7736441 0 0 Deletion 2 HET FN2480 Chr10 12429396 C-T 0 0 Single Base Substitution 0 HET FN2480 Chr10 22790924 Chr4 7919546 0 Translocation 0 LOC_Os10g42340 expressed protein FN2480 Chr10 22791309 Chr1 26784226 0 Translocation 0 LOC_Os01g46926 ubiquitin-conjugating enzyme, putative, expressed FN2480 Chr10 22791309 Chr1 26784226 0 Translocation 0 LOC_Os10g42340 expressed protein FN2480 Chr10 23181305 T-A 0 0 Single Base Substitution 0 HET FN2480 Chr10 4388176 4388180 0 0 Insertion 4 HET FN2480 Chr10 582951 Chr1 26783411 0 Translocation 0 FN2480 Chr10 582951 Chr1 26783411 0 Translocation 0 LOC_Os01g46926 ubiquitin-conjugating enzyme, putative, expressed FN2480 Chr10 590969 Chr4 7918998 0 Translocation 0 FN2480 Chr10 9157437 Chr1 19386378 0 Translocation 0 LOC_Os01g35030 MDR-like ABC transporter, putative, expressed FN2480 Chr10 9157437 Chr1 19386378 0 Translocation 0 LOC_Os10g18060 retrotransposon protein, putative, unclassified, expressed FN2480 Chr10 9157779 Chr1 19447943 0 Translocation 0 FN2480 Chr10 9769091 9769098 0 0 Deletion 7 Homo FN2480 Chr11 10994564 10994583 0 0 Deletion 19 splice_acceptor_variant&disruptive_inframe_deletion&splice_region_variant&intron_variant HET LOC_Os11g19230 retrotransposon protein, putative, Ty1-copia subclass, expressed FN2480 Chr11 22529369 Chr8 10765827 0 Translocation 0 LOC_Os11g37990 chloroplastic group IIA intron splicing facilitator CRS1, chloroplast precursor, putative, expressed FN2480 Chr11 8469325 G-T 0 0 Single Base Substitution 0 Homo FN2480 Chr12 11342989 G-A 0 0 Single Base Substitution 0 HET FN2480 Chr12 12301752 12301753 0 0 Insertion 1 HET FN2480 Chr12 14771961 A-G 0 0 Single Base Substitution 0 HET FN2480 Chr12 19425954 Chr10 9156894 0 Translocation 0 LOC_Os10g18060 retrotransposon protein, putative, unclassified, expressed FN2480 Chr12 19425954 Chr10 9156894 0 Translocation 0 LOC_Os12g32180 cornichon protein, putative, expressed FN2480 Chr12 22041964 T-C 0 0 Single Base Substitution 0 Homo FN2480 Chr12 24422317 T-C 0 0 Single Base Substitution 0 Homo FN2480 Chr12 3255893 G-A 0 0 Single Base Substitution 0 HET FN2480 Chr12 9471557 A-G 0 0 Single Base Substitution 0 HET FN2480 Chr2 10948184 G-A 0 0 Single Base Substitution 0 HET FN2480 Chr2 183791 T-G 0 0 Single Base Substitution 0 HET FN2480 Chr2 22566977 C-T 0 0 Single Base Substitution 0 HET FN2480 Chr2 28871502 T-A 0 0 Single Base Substitution 0 HET FN2480 Chr2 3166275 C-T 0 0 Single Base Substitution 0 HET FN2480 Chr2 9267320 G-A 0 0 Single Base Substitution 0 HET FN2480 Chr3 1707620 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g03790 AMP-binding domain containing protein, expressed FN2480 Chr3 20793700 20793712 0 0 Deletion 12 HET FN2480 Chr3 28043010 G-A 0 0 Single Base Substitution 0 Homo FN2480 Chr3 35614776 35614796 0 0 Deletion 20 Homo FN2480 Chr3 7344873 A-T 0 0 Single Base Substitution 0 HET FN2480 Chr4 15822371 G-A 0 0 Single Base Substitution 0 HET FN2480 Chr4 16807881 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g28410 expressed protein FN2480 Chr4 17329863 17329864 0 0 Deletion 1 frameshift_variant HET LOC_Os04g29224 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2480 Chr4 18474996 C-T 0 0 Single Base Substitution 0 HET FN2480 Chr4 25391469 G-T 0 0 Single Base Substitution 0 HET FN2480 Chr4 28784630 28784632 0 0 Insertion 2 HET FN2480 Chr4 30847118 T-A 0 0 Single Base Substitution 0 Homo FN2480 Chr4 30847119 C-A 0 0 Single Base Substitution 0 Homo FN2480 Chr4 32228010 32228011 0 0 Deletion 1 HET FN2480 Chr4 34211063 34211064 0 0 Deletion 1 Homo FN2480 Chr4 6209721 6209727 0 0 Deletion 6 Homo FN2480 Chr5 14513163 A-G 0 0 Single Base Substitution 0 HET FN2480 Chr5 17295486 A-G 0 0 Single Base Substitution 0 HET FN2480 Chr5 21816867 21816868 0 0 Insertion 1 HET FN2480 Chr5 23573871 A-G 0 0 Single Base Substitution 0 HET FN2480 Chr5 29036928 C-T 0 0 Single Base Substitution 0 HET FN2480 Chr6 28763937 28763940 0 0 Insertion 3 inframe_insertion HET LOC_Os06g47510 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2480 Chr6 8865776 G-A 0 0 Single Base Substitution 0 HET FN2480 Chr6 9119692 A-G 0 0 Single Base Substitution 0 HET FN2480 Chr7 159078 A-G 0 0 Single Base Substitution 0 HET FN2480 Chr7 18028459 C-T 0 0 Single Base Substitution 0 HET FN2480 Chr7 22553091 C-T 0 0 Single Base Substitution 0 Homo FN2480 Chr7 2829507 2829509 0 0 Insertion 2 HET FN2480 Chr7 28527440 28527458 0 0 Deletion 18 HET FN2480 Chr7 3439611 G-A 0 0 Single Base Substitution 0 Homo FN2480 Chr7 6728845 6728855 0 0 Deletion 10 Homo FN2480 Chr8 10708962 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os08g17480 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2480 Chr8 13069232 Chr4 16892790 0 Translocation 0 FN2480 Chr9 14988639 G-A 0 0 Single Base Substitution 0 Homo FN2480 Chr9 22325175 C-A 0 0 Single Base Substitution 0 HET FN2480 Chr9 6070674 C-G 0 0 Single Base Substitution 0 HET