FN2540-S Chr1 12013243 C-T 0 0 Single Base Substitution 0 HET FN2540-S Chr1 16545929 16545930 0 0 Deletion 1 Homo FN2540-S Chr1 2258601 A-G 0 0 Single Base Substitution 0 HET FN2540-S Chr1 25023643 25023658 0 0 Deletion 15 Homo FN2540-S Chr1 2922041 A-G 0 0 Single Base Substitution 0 Homo FN2540-S Chr1 6442797 G-A 0 0 Single Base Substitution 0 Homo FN2540-S Chr10 16488963 T-A 0 0 Single Base Substitution 0 HET FN2540-S Chr10 1678099 A-G 0 0 Single Base Substitution 0 Homo FN2540-S Chr10 22510643 C-T 0 0 Single Base Substitution 0 HET FN2540-S Chr10 6125388 C-T 0 0 Single Base Substitution 0 Homo FN2540-S Chr11 23795746 G-A 0 0 Single Base Substitution 0 HET FN2540-S Chr11 26917545 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os11g44500 protein kinase domain containing protein, expressed FN2540-S Chr11 3019607 C-T 0 0 Single Base Substitution 0 Homo FN2540-S Chr11 5306265 T-G 0 0 Single Base Substitution 0 HET FN2540-S Chr11 6252719 C-T 0 0 Single Base Substitution 0 Homo FN2540-S Chr12 1118422 G-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g03000 retrotransposon protein, putative, unclassified, expressed FN2540-S Chr12 12612167 T-G 0 0 Single Base Substitution 0 HET FN2540-S Chr12 22800140 Chr9 4757324 0 Translocation 0 LOC_Os12g37180 transposon protein, putative, CACTA, En/Spm sub-class FN2540-S Chr12 24609490 C-T 0 0 Single Base Substitution 0 HET FN2540-S Chr12 24921888 G-T 0 0 Single Base Substitution 0 HET FN2540-S Chr12 5248533 5248541 0 0 Deletion 8 HET FN2540-S Chr12 5612246 5612251 0 0 Deletion 5 frameshift_variant HET LOC_Os12g10570 ATP synthase subunit beta, putative, expressed FN2540-S Chr2 3392122 A-G 0 0 Single Base Substitution 0 HET FN2540-S Chr2 5455761 G-A 0 0 Single Base Substitution 0 HET FN2540-S Chr2 6435676 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os02g12360 nuclear protein ZAP-related, putative, expressed FN2540-S Chr2 7132079 G-T 0 0 Single Base Substitution 0 HET FN2540-S Chr3 12834032 12834034 0 0 Insertion 2 HET FN2540-S Chr3 13452684 13452706 0 0 Deletion 22 HET FN2540-S Chr3 155198 Chr1 5547586 0 Translocation 0 LOC_Os03g01240 CCR4-Not complex component, Not1domain containing protein, expressed FN2540-S Chr3 155782 Chr1 5547624 0 Translocation 0 LOC_Os03g01240 CCR4-Not complex component, Not1domain containing protein, expressed FN2540-S Chr3 19102785 G-T 0 0 Single Base Substitution 0 Homo FN2540-S Chr3 21602979 21603006 0 0 Deletion 27 Homo FN2540-S Chr3 31095530 T-A 0 0 Single Base Substitution 0 HET FN2540-S Chr3 6100962 T-C 0 0 Single Base Substitution 0 HET FN2540-S Chr3 8848736 C-T 0 0 Single Base Substitution 0 HET FN2540-S Chr4 12492036 T-C 0 0 Single Base Substitution 0 HET FN2540-S Chr4 15065348 15065349 0 0 Insertion 1 HET FN2540-S Chr4 15388901 A-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g26380 aspartic proteinase-like protein 2 precursor, putative, expressed FN2540-S Chr4 15922993 G-T 0 0 Single Base Substitution 0 HET FN2540-S Chr4 17157001 17205000 0 0 Deletion 47999 LOC_Os04g28940 retrotransposon protein, putative, unclassified, expressed FN2540-S Chr4 17157001 17205000 0 0 Deletion 47999 LOC_Os04g28970 expressed protein FN2540-S Chr4 17157001 17205000 0 0 Deletion 47999 LOC_Os04g28980 expressed protein FN2540-S Chr4 17157001 17205000 0 0 Deletion 47999 LOC_Os04g28990 dehydrogenase, putative, expressed FN2540-S Chr4 17157001 17205000 0 0 Deletion 47999 LOC_Os04g29000 sulfotransferase domain containing protein, expressed FN2540-S Chr4 17157001 17205000 0 0 Deletion 47999 LOC_Os04g29010 expressed protein FN2540-S Chr4 17157001 17205000 0 0 Deletion 47999 LOC_Os04g29020 expressed protein FN2540-S Chr4 17157001 17205000 0 0 Deletion 47999 LOC_Os04g29030 dehydrogenase, putative, expressed FN2540-S Chr4 17210001 17289000 0 0 Deletion 78999 LOC_Os04g29050 expressed protein FN2540-S Chr4 17210001 17289000 0 0 Deletion 78999 LOC_Os04g29060 hypothetical protein FN2540-S Chr4 17210001 17289000 0 0 Deletion 78999 LOC_Os04g29080 hypothetical protein FN2540-S Chr4 17210001 17289000 0 0 Deletion 78999 LOC_Os04g29090 FAD-binding and arabino-lactone oxidase domains containing protein, putative, expressed FN2540-S Chr4 17210001 17289000 0 0 Deletion 78999 LOC_Os04g29100 hypothetical protein FN2540-S Chr4 17210001 17289000 0 0 Deletion 78999 LOC_Os04g29110 hypothetical protein FN2540-S Chr4 17210001 17289000 0 0 Deletion 78999 LOC_Os04g29120 retrotransposon protein, putative, unclassified, expressed FN2540-S Chr4 17210001 17289000 0 0 Deletion 78999 LOC_Os04g29130 retrotransposon protein, putative, unclassified FN2540-S Chr4 17210001 17289000 0 0 Deletion 78999 LOC_Os04g29140 retrotransposon protein, putative, unclassified FN2540-S Chr4 17210001 17289000 0 0 Deletion 78999 LOC_Os04g29150 retrotransposon protein, putative, unclassified FN2540-S Chr4 17336572 C-T 0 0 Single Base Substitution 0 Homo FN2540-S Chr4 2523975 C-A 0 0 Single Base Substitution 0 STOP_GAINED HET LOC_Os04g05104 retrotransposon protein, putative, unclassified, expressed FN2540-S Chr4 30640429 30640587 0 0 Inversion 0 FN2540-S Chr5 13132876 13132880 0 0 Deletion 4 frameshift_variant HET LOC_Os05g23030 retrotransposon protein, putative, Ty3-gypsy subclass FN2540-S Chr5 14776518 G-A 0 0 Single Base Substitution 0 HET FN2540-S Chr5 3216183 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g06290 expressed protein FN2540-S Chr5 7567508 7567523 0 0 Deletion 15 Homo FN2540-S Chr5 7828412 7828439 0 0 Deletion 27 HET FN2540-S Chr5 9376747 T-A 0 0 Single Base Substitution 0 HET FN2540-S Chr6 13857441 T-C 0 0 Single Base Substitution 0 HET FN2540-S Chr6 13857442 T-A 0 0 Single Base Substitution 0 HET FN2540-S Chr6 1684486 C-A 0 0 Single Base Substitution 0 Homo FN2540-S Chr6 19413931 19413941 0 0 Deletion 10 HET FN2540-S Chr6 21657463 Chr4 17923880 0 Translocation 0 LOC_Os06g36770 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B, putative, expressed FN2540-S Chr6 8148031 T-C 0 0 Single Base Substitution 0 HET FN2540-S Chr6 8832782 8832788 0 0 Deletion 6 HET FN2540-S Chr6 9792388 T-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os06g16890 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2540-S Chr7 10464944 G-A 0 0 Single Base Substitution 0 HET FN2540-S Chr7 13633802 C-A 0 0 Single Base Substitution 0 HET FN2540-S Chr7 18969818 18969820 0 0 Deletion 2 HET FN2540-S Chr7 8563563 A-G 0 0 Single Base Substitution 0 HET FN2540-S Chr7 9866506 A-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os07g16810 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2540-S Chr8 1578727 Chr4 6811822 0 Translocation 0 LOC_Os08g03370 Divergent PAP2 family domain containing protein, expressed FN2540-S Chr8 1578728 Chr4 6812774 0 Translocation 0 LOC_Os08g03370 Divergent PAP2 family domain containing protein, expressed FN2540-S Chr8 23494056 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os08g37180 patatin, putative, expressed FN2540-S Chr8 9223071 9223074 0 0 Deletion 3 Homo FN2540-S Chr9 10149997 A-C 0 0 Single Base Substitution 0 Homo FN2540-S Chr9 20255881 C-T 0 0 Single Base Substitution 0 HET FN2540-S Chr9 4757267 Chr4 1178866 0 Translocation 0 FN2540-S Chr9 8755341 C-A 0 0 Single Base Substitution 0 HET FN2540-S Chr9 8755342 C-T 0 0 Single Base Substitution 0 HET