FN2542-S Chr1 13563200 T-A 0 0 Single Base Substitution 0 Homo FN2542-S Chr1 20550288 C-T 0 0 Single Base Substitution 0 HET FN2542-S Chr1 25661009 A-G 0 0 Single Base Substitution 0 HET FN2542-S Chr1 27947256 G-A 0 0 Single Base Substitution 0 HET FN2542-S Chr1 30046436 T-A 0 0 Single Base Substitution 0 HET FN2542-S Chr1 39905634 A-C 0 0 Single Base Substitution 0 HET FN2542-S Chr1 41977822 41977824 0 0 Deletion 2 frameshift_variant HET LOC_Os01g72370 helix-loop-helix DNA-binding domain containing protein, expressed FN2542-S Chr1 5411035 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g10280 phosphoribosylaminoimidazole carboxylase, chloroplast precursor, putative, expressed FN2542-S Chr1 9670186 9670191 0 0 Deletion 5 Homo FN2542-S Chr10 10511969 G-A 0 0 Single Base Substitution 0 STOP_GAINED HET LOC_Os10g20740 hypothetical protein FN2542-S Chr10 12079542 T-C 0 0 Single Base Substitution 0 HET FN2542-S Chr10 338164 T-C 0 0 Single Base Substitution 0 HET FN2542-S Chr10 8160320 T-G 0 0 Single Base Substitution 0 HET FN2542-S Chr11 12752488 G-A 0 0 Single Base Substitution 0 HET FN2542-S Chr11 14318736 T-C 0 0 Single Base Substitution 0 HET FN2542-S Chr11 15094758 Chr1 12471727 0 Translocation 0 FN2542-S Chr11 16168869 C-A 0 0 Single Base Substitution 0 HET FN2542-S Chr11 23883200 G-A 0 0 Single Base Substitution 0 HET FN2542-S Chr12 15274547 C-T 0 0 Single Base Substitution 0 HET FN2542-S Chr12 18738532 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g31130 retrotransposon protein, putative, unclassified, expressed FN2542-S Chr12 19010591 19010595 0 0 Insertion 4 HET FN2542-S Chr12 19308399 19308403 0 0 Insertion 4 HET FN2542-S Chr12 19935426 C-T 0 0 Single Base Substitution 0 HET FN2542-S Chr12 2814262 2814263 0 0 Deletion 1 HET FN2542-S Chr12 765820 G-A 0 0 Single Base Substitution 0 HET FN2542-S Chr2 15831648 C-G 0 0 Single Base Substitution 0 HET FN2542-S Chr2 2189220 2189823 0 0 Inversion 0 FN2542-S Chr2 2249822 2249823 0 0 Deletion 1 Homo FN2542-S Chr2 23254980 23254981 0 0 Deletion 1 HET FN2542-S Chr2 2832702 2832709 0 0 Deletion 7 Homo FN2542-S Chr2 30410403 30410412 0 0 Deletion 9 HET FN2542-S Chr2 31547664 G-A 0 0 Single Base Substitution 0 HET FN2542-S Chr3 12038169 A-G 0 0 Single Base Substitution 0 HET FN2542-S Chr3 12991373 A-G 0 0 Single Base Substitution 0 HET FN2542-S Chr3 24751856 A-G 0 0 Single Base Substitution 0 HET FN2542-S Chr3 33219764 A-C 0 0 Single Base Substitution 0 HET FN2542-S Chr3 33415659 C-T 0 0 Single Base Substitution 0 HET FN2542-S Chr3 6150959 C-A 0 0 Single Base Substitution 0 HET FN2542-S Chr4 10794076 10794077 0 0 Deletion 1 HET FN2542-S Chr4 11138616 C-T 0 0 Single Base Substitution 0 HET FN2542-S Chr4 15324557 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g26290 retrotransposon protein, putative, unclassified, expressed FN2542-S Chr4 23390785 23390807 0 0 Deletion 22 Homo FN2542-S Chr4 24563484 24563544 0 0 Insertion 60 HET FN2542-S Chr4 25714050 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g43450 expressed protein FN2542-S Chr4 28815940 28815944 0 0 Deletion 4 HET FN2542-S Chr4 4884547 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g08832 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2542-S Chr5 10696518 10696519 0 0 Insertion 1 HET FN2542-S Chr5 22259103 G-A 0 0 Single Base Substitution 0 HET FN2542-S Chr5 23140205 23140229 0 0 Insertion 24 HET FN2542-S Chr6 12955659 G-T 0 0 Single Base Substitution 0 HET FN2542-S Chr6 16023351 16023579 0 0 Inversion 0 LOC_Os06g28194 expressed protein FN2542-S Chr6 22816352 22816353 0 0 Insertion 1 HET FN2542-S Chr6 23516057 Chr1 19483726 0 Translocation 0 FN2542-S Chr6 23516057 Chr1 19483726 0 Translocation 0 LOC_Os01g35200 transposon protein, putative, CACTA, En/Spm sub-class FN2542-S Chr6 23516344 Chr5 5212207 0 Translocation 0 FN2542-S Chr6 23516344 Chr5 5212207 0 Translocation 0 LOC_Os05g09330 transposon protein, putative, CACTA, En/Spm sub-class FN2542-S Chr6 4045190 C-G 0 0 Single Base Substitution 0 HET FN2542-S Chr7 10610761 C-G 0 0 Single Base Substitution 0 HET FN2542-S Chr7 20630996 C-A 0 0 Single Base Substitution 0 HET FN2542-S Chr7 2174000 2174004 0 0 Deletion 4 HET FN2542-S Chr7 28492110 28492111 0 0 Deletion 1 HET FN2542-S Chr7 4211655 A-G 0 0 Single Base Substitution 0 HET FN2542-S Chr7 7834267 T-G 0 0 Single Base Substitution 0 FN2542-S Chr7 8498340 G-A 0 0 Single Base Substitution 0 HET FN2542-S Chr7 9050216 C-T 0 0 Single Base Substitution 0 HET FN2542-S Chr8 16597882 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os08g27180 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2542-S Chr8 21458443 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os08g34230 retrotransposon protein, putative, unclassified, expressed FN2542-S Chr8 4984924 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os08g08620 retrotransposon protein, putative, unclassified FN2542-S Chr8 826001 859000 0 0 Deletion 32999 LOC_Os08g02290 expressed protein FN2542-S Chr8 826001 859000 0 0 Deletion 32999 LOC_Os08g02300 no apical meristem protein, putative, expressed FN2542-S Chr9 11431652 A-G 0 0 Single Base Substitution 0 HET FN2542-S Chr9 13007951 G-A 0 0 Single Base Substitution 0 Homo FN2542-S Chr9 13613278 C-A 0 0 Single Base Substitution 0 HET FN2542-S Chr9 16712149 G-A 0 0 Single Base Substitution 0 HET FN2542-S Chr9 5705191 T-C 0 0 Single Base Substitution 0 Homo FN2542-S Chr9 5933389 5933390 0 0 Insertion 1 HET FN2542-S Chr9 8791817 G-A 0 0 Single Base Substitution 0 HET