FN2545-S Chr1 10271001 10390000 0 0 Deletion 118999 LOC_Os01g18300 expressed protein FN2545-S Chr1 10271001 10390000 0 0 Deletion 118999 LOC_Os01g18310 expressed protein FN2545-S Chr1 10271001 10390000 0 0 Deletion 118999 LOC_Os01g18320 protoporphyrinogen oxidase, chloroplast precursor, putative, expressed FN2545-S Chr1 10271001 10390000 0 0 Deletion 118999 LOC_Os01g18330 hypothetical protein FN2545-S Chr1 10271001 10390000 0 0 Deletion 118999 LOC_Os01g18340 glycine-rich cell wall protein, putative, expressed FN2545-S Chr1 10271001 10390000 0 0 Deletion 118999 LOC_Os01g18350 expressed protein FN2545-S Chr1 10271001 10390000 0 0 Deletion 118999 LOC_Os01g18360 OsIAA4 - Auxin-responsive Aux/IAA gene family member, expressed FN2545-S Chr1 10271001 10390000 0 0 Deletion 118999 LOC_Os01g18370 expressed protein FN2545-S Chr1 10271001 10390000 0 0 Deletion 118999 LOC_Os01g18375 hydrophobic protein, putative, expressed FN2545-S Chr1 10271001 10390000 0 0 Deletion 118999 LOC_Os01g18390 OsRCI2-1 - Putative low temperature and salt responsive protein, expressed FN2545-S Chr1 10271001 10390000 0 0 Deletion 118999 LOC_Os01g18400 CHIT10 - Chitinase family protein precursor, expressed FN2545-S Chr1 10271001 10390000 0 0 Deletion 118999 LOC_Os01g18410 expressed protein FN2545-S Chr1 10271001 10390000 0 0 Deletion 118999 LOC_Os01g18420 OsMADS88 - MADS-box family gene with M-gamma type-box, expressed FN2545-S Chr1 10271001 10390000 0 0 Deletion 118999 LOC_Os01g18440 OsMADS89 - MADS-box family gene with M-gamma type-box, expressed FN2545-S Chr1 10271001 10390000 0 0 Deletion 118999 LOC_Os01g18450 expressed protein FN2545-S Chr1 10271001 10390000 0 0 Deletion 118999 LOC_Os01g18460 expressed protein FN2545-S Chr1 10271001 10390000 0 0 Deletion 118999 LOC_Os01g18470 transposon protein, putative, unclassified, expressed FN2545-S Chr1 10271001 10390000 0 0 Deletion 118999 LOC_Os01g18480 transposon protein, putative, unclassified, expressed FN2545-S Chr1 10394001 10500000 0 0 Deletion 105999 LOC_Os01g18480 transposon protein, putative, unclassified, expressed FN2545-S Chr1 10394001 10500000 0 0 Deletion 105999 LOC_Os01g18490 expressed protein FN2545-S Chr1 10394001 10500000 0 0 Deletion 105999 LOC_Os01g18500 transposon protein, putative, unclassified FN2545-S Chr1 10394001 10500000 0 0 Deletion 105999 LOC_Os01g18510 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2545-S Chr1 10394001 10500000 0 0 Deletion 105999 LOC_Os01g18520 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2545-S Chr1 10394001 10500000 0 0 Deletion 105999 LOC_Os01g18530 expressed protein FN2545-S Chr1 10394001 10500000 0 0 Deletion 105999 LOC_Os01g18550 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2545-S Chr1 10394001 10500000 0 0 Deletion 105999 LOC_Os01g18560 transposon protein, putative, CACTA, En/Spm sub-class FN2545-S Chr1 10394001 10500000 0 0 Deletion 105999 LOC_Os01g18570 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2545-S Chr1 10394001 10500000 0 0 Deletion 105999 LOC_Os01g18584 WRKY9, expressed FN2545-S Chr1 10394001 10500000 0 0 Deletion 105999 LOC_Os01g18610 retrotransposon protein, putative, LINE subclass, expressed FN2545-S Chr1 10394001 10500000 0 0 Deletion 105999 LOC_Os01g18620 transferase family protein, putative, expressed FN2545-S Chr1 10394001 10500000 0 0 Deletion 105999 LOC_Os01g18630 aspartic proteinase oryzasin-1 precursor, putative, expressed FN2545-S Chr1 10394001 10500000 0 0 Deletion 105999 LOC_Os01g18640 aminotransferase, putative, expressed FN2545-S Chr1 15213687 C-T 0 0 Single Base Substitution 0 HET FN2545-S Chr1 27977518 G-A 0 0 Single Base Substitution 0 HET FN2545-S Chr1 30336445 A-G 0 0 Single Base Substitution 0 HET FN2545-S Chr1 31204205 31204209 0 0 Deletion 4 HET FN2545-S Chr1 3905569 T-A 0 0 Single Base Substitution 0 Homo FN2545-S Chr1 5150421 5150423 0 0 Insertion 2 Homo FN2545-S Chr1 7831353 A-C 0 0 Single Base Substitution 0 HET FN2545-S Chr10 12723232 12723233 0 0 Insertion 1 HET FN2545-S Chr10 21782853 21782854 0 0 Deletion 1 HET FN2545-S Chr10 2286962 2286966 0 0 Deletion 4 HET FN2545-S Chr11 11256251 T-A 0 0 Single Base Substitution 0 Homo FN2545-S Chr11 11924804 C-G 0 0 Single Base Substitution 0 Homo FN2545-S Chr11 11936301 11936302 0 0 Deletion 1 frameshift_variant HET LOC_Os11g20590 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2545-S Chr11 16394235 C-A 0 0 Single Base Substitution 0 HET FN2545-S Chr11 16394236 A-G 0 0 Single Base Substitution 0 HET FN2545-S Chr11 22131445 22131450 0 0 Insertion 5 HET FN2545-S Chr11 2352135 G-T 0 0 Single Base Substitution 0 HET FN2545-S Chr11 2612971 G-A 0 0 Single Base Substitution 0 HET FN2545-S Chr11 8096130 T-G 0 0 Single Base Substitution 0 Homo FN2545-S Chr11 8264479 C-A 0 0 Single Base Substitution 0 HET FN2545-S Chr12 17778566 17778569 0 0 Deletion 3 HET FN2545-S Chr12 20180470 G-T 0 0 Single Base Substitution 0 HET FN2545-S Chr2 11020083 G-A 0 0 Single Base Substitution 0 HET FN2545-S Chr2 14894339 A-G 0 0 Single Base Substitution 0 HET FN2545-S Chr2 17908175 C-G 0 0 Single Base Substitution 0 Homo FN2545-S Chr2 28172743 G-A 0 0 Single Base Substitution 0 HET FN2545-S Chr2 28904800 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os02g47340 retrotransposon protein, putative, unclassified, expressed FN2545-S Chr2 28983475 T-C 0 0 Single Base Substitution 0 HET FN2545-S Chr2 31372390 G-A 0 0 Single Base Substitution 0 HET FN2545-S Chr2 34874241 T-A 0 0 Single Base Substitution 0 Homo FN2545-S Chr2 9951299 A-G 0 0 Single Base Substitution 0 Homo FN2545-S Chr3 17641810 A-C 0 0 Single Base Substitution 0 HET FN2545-S Chr3 18813810 19163155 0 0 Inversion 0 FN2545-S Chr3 18813826 19163160 0 0 Inversion 0 FN2545-S Chr3 24823818 C-A 0 0 Single Base Substitution 0 HET FN2545-S Chr3 4947459 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g09930 sulfate transporter, putative, expressed FN2545-S Chr4 10813959 G-A 0 0 Single Base Substitution 0 HET FN2545-S Chr4 17306708 17306726 0 0 Deletion 18 disruptive_inframe_deletion HET LOC_Os04g29190 retrotransposon protein, putative, unclassified, expressed FN2545-S Chr4 19351278 C-T 0 0 Single Base Substitution 0 HET FN2545-S Chr4 20283628 C-T 0 0 Single Base Substitution 0 HET FN2545-S Chr4 25807355 G-A 0 0 Single Base Substitution 0 HET FN2545-S Chr4 25924254 G-A 0 0 Single Base Substitution 0 HET FN2545-S Chr4 27963533 27963546 0 0 Deletion 13 HET FN2545-S Chr4 308763 1087426 0 0 Inversion 0 LOC_Os04g01439 retrotransposon protein, putative, unclassified, expressed FN2545-S Chr5 14609222 G-A 0 0 Single Base Substitution 0 HET FN2545-S Chr5 16949862 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g28920 retrotransposon, putative, centromere-specific, expressed FN2545-S Chr5 2474880 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g05090 transposon protein, putative, unclassified, expressed FN2545-S Chr5 2578163 T-C 0 0 Single Base Substitution 0 HET FN2545-S Chr5 4260752 G-A 0 0 Single Base Substitution 0 HET FN2545-S Chr5 4415813 A-G 0 0 Single Base Substitution 0 HET FN2545-S Chr6 14799480 G-A 0 0 Single Base Substitution 0 HET FN2545-S Chr6 15114655 G-A 0 0 Single Base Substitution 0 HET FN2545-S Chr6 15284637 15284638 0 0 Deletion 1 HET FN2545-S Chr6 16552093 Chr4 2748318 0 Translocation 0 LOC_Os04g05460 expressed protein FN2545-S Chr6 16552093 Chr4 2748318 0 Translocation 0 LOC_Os06g29050 transposon protein, putative, unclassified, expressed FN2545-S Chr6 21239751 G-A 0 0 Single Base Substitution 0 HET FN2545-S Chr6 23128326 A-C 0 0 Single Base Substitution 0 HET FN2545-S Chr6 23784885 T-A 0 0 Single Base Substitution 0 HET FN2545-S Chr6 25234429 25234433 0 0 Deletion 4 HET FN2545-S Chr6 6575000 6575002 0 0 Deletion 2 HET FN2545-S Chr6 8733118 C-T 0 0 Single Base Substitution 0 HET FN2545-S Chr7 13860928 C-T 0 0 Single Base Substitution 0 HET FN2545-S Chr7 19975824 G-A 0 0 Single Base Substitution 0 HET FN2545-S Chr7 23311732 23311733 0 0 Deletion 1 Homo FN2545-S Chr7 6831651 C-T 0 0 Single Base Substitution 0 Homo FN2545-S Chr8 1021855 A-C 0 0 Single Base Substitution 0 HET FN2545-S Chr8 13565191 T-C 0 0 Single Base Substitution 0 HET FN2545-S Chr8 14714229 G-A 0 0 Single Base Substitution 0 HET FN2545-S Chr8 15728206 C-G 0 0 Single Base Substitution 0 HET FN2545-S Chr8 18006403 Chr1 9104997 0 Translocation 0 FN2545-S Chr8 24070961 A-C 0 0 Single Base Substitution 0 HET FN2545-S Chr8 26704437 26704439 0 0 Deletion 2 HET FN2545-S Chr8 27145230 27145245 0 0 Deletion 15 HET FN2545-S Chr8 27376485 27376487 0 0 Deletion 2 Homo FN2545-S Chr8 6871985 6871994 0 0 Deletion 9 HET FN2545-S Chr8 6952512 6952513 0 0 Deletion 1 frameshift_variant HET LOC_Os08g11850 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2545-S Chr8 9182140 A-T 0 0 Single Base Substitution 0 HET FN2545-S Chr8 95845 95857 0 0 Insertion 12 HET FN2545-S Chr9 10907822 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os09g17830 protein transport protein Sec61 subunit alpha, putative, expressed FN2545-S Chr9 11368143 G-A 0 0 Single Base Substitution 0 HET FN2545-S Chr9 13098981 13098982 0 0 Deletion 1 HET FN2545-S Chr9 4630570 4630694 0 0 Deletion 124 HET