FN2549-S Chr1 10336117 A-T 0 0 Single Base Substitution 0 Homo FN2549-S Chr1 10559810 G-C 0 0 Single Base Substitution 0 HET FN2549-S Chr1 19841852 A-C 0 0 Single Base Substitution 0 Homo FN2549-S Chr1 35169198 T-C 0 0 Single Base Substitution 0 HET FN2549-S Chr1 3732433 C-G 0 0 Single Base Substitution 0 HET FN2549-S Chr1 3992814 T-G 0 0 Single Base Substitution 0 HET FN2549-S Chr1 3993093 C-A 0 0 Single Base Substitution 0 HET FN2549-S Chr10 10202228 Chr8 17046589 0 Translocation 0 FN2549-S Chr10 13455408 13455409 0 0 Deletion 1 frameshift_variant HET LOC_Os10g25960 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2549-S Chr10 18963098 Chr1 27209441 0 Translocation 0 FN2549-S Chr10 19374389 Chr8 18274054 0 Translocation 0 LOC_Os10g36250 tetratricopeptide repeat, putative, expressed FN2549-S Chr10 23010525 C-T 0 0 Single Base Substitution 0 Homo FN2549-S Chr11 10254338 T-G 0 0 Single Base Substitution 0 HET FN2549-S Chr11 10874570 Chr2 5944612 0 Translocation 0 FN2549-S Chr11 10874570 Chr2 5944612 0 Translocation 0 LOC_Os02g11090 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2549-S Chr11 14431284 14431287 0 0 Insertion 3 HET FN2549-S Chr11 15781728 Chr8 18461450 0 Translocation 0 FN2549-S Chr11 18371992 Chr10 879842 0 Translocation 0 LOC_Os11g31440 expressed protein FN2549-S Chr11 20125958 Chr3 8265507 0 Translocation 0 LOC_Os03g15130 expressed protein FN2549-S Chr11 20125958 Chr3 8265507 0 Translocation 0 LOC_Os11g34330 expressed protein FN2549-S Chr11 26331049 Chr10 20813218 0 Translocation 0 FN2549-S Chr11 26331049 Chr10 20813218 0 Translocation 0 LOC_Os10g39044 expressed protein FN2549-S Chr11 27437925 Chr4 18762741 0 Translocation 0 LOC_Os11g45360 DEFL15 - Defensin and Defensin-like DEFL family, expressed FN2549-S Chr11 28255922 Chr2 13043334 0 Translocation 0 LOC_Os11g47030 receptor protein kinase, putative, expressed FN2549-S Chr11 28408444 Chr9 408710 0 Translocation 0 LOC_Os09g01580 expressed protein FN2549-S Chr11 28408444 Chr9 408710 0 Translocation 0 LOC_Os11g47240 leucine-rich repeat receptor protein kinase EXS precursor, putative, expressed FN2549-S Chr11 28671319 Chr8 6707695 0 Translocation 0 LOC_Os08g11440 retrotransposon protein, putative, unclassified FN2549-S Chr11 28671319 Chr8 6707695 0 Translocation 0 LOC_Os11g47451 retrotransposon protein, putative, unclassified, expressed FN2549-S Chr11 9437658 T-G 0 0 Single Base Substitution 0 Homo FN2549-S Chr12 14047873 Chr4 30046413 0 Translocation 0 FN2549-S Chr12 14825428 C-T 0 0 Single Base Substitution 0 HET FN2549-S Chr12 18642393 Chr10 17911445 0 Translocation 0 FN2549-S Chr12 26886516 26886530 0 0 Deletion 14 HET FN2549-S Chr12 4350777 4350800 0 0 Deletion 23 HET FN2549-S Chr12 9554469 T-C 0 0 Single Base Substitution 0 HET FN2549-S Chr12 9726778 G-A 0 0 Single Base Substitution 0 HET FN2549-S Chr2 25284977 Chr1 12528665 0 Translocation 0 FN2549-S Chr2 25480062 G-A 0 0 Single Base Substitution 0 Homo FN2549-S Chr2 29060868 29233108 0 0 Inversion 0 LOC_Os02g47560 DNA-binding protein, putative, expressed FN2549-S Chr2 29060868 29233108 0 0 Inversion 0 LOC_Os02g47800 monodehydroascorbate reductase, putative, expressed FN2549-S Chr2 29060881 29233116 0 0 Inversion 0 LOC_Os02g47560 DNA-binding protein, putative, expressed FN2549-S Chr2 29060881 29233116 0 0 Inversion 0 LOC_Os02g47800 monodehydroascorbate reductase, putative, expressed FN2549-S Chr3 14641870 14641872 0 0 Deletion 2 frameshift_variant HET LOC_Os03g25590 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2549-S Chr3 17835288 T-G 0 0 Single Base Substitution 0 HET FN2549-S Chr3 190578 Chr2 14232080 0 Translocation 0 LOC_Os02g24560 retrotransposon protein, putative, unclassified, expressed FN2549-S Chr3 190578 Chr2 14232080 0 Translocation 0 LOC_Os03g01270 expansin precursor, putative, expressed FN2549-S Chr3 19069149 19069151 0 0 Insertion 2 HET FN2549-S Chr3 190802 Chr2 14232082 0 Translocation 0 LOC_Os02g24560 retrotransposon protein, putative, unclassified, expressed FN2549-S Chr3 190802 Chr2 14232082 0 Translocation 0 LOC_Os03g01270 expansin precursor, putative, expressed FN2549-S Chr3 88245 190571 0 0 Inversion 0 FN2549-S Chr3 88245 190571 0 0 Inversion 0 LOC_Os03g01270 expansin precursor, putative, expressed FN2549-S Chr3 88256 190821 0 0 Inversion 0 FN2549-S Chr3 88256 190821 0 0 Inversion 0 LOC_Os03g01270 expansin precursor, putative, expressed FN2549-S Chr4 11333499 C-A 0 0 Single Base Substitution 0 HET FN2549-S Chr4 11663448 11663451 0 0 Deletion 3 disruptive_inframe_deletion HET LOC_Os04g20790 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2549-S Chr4 14592733 14592738 0 0 Insertion 5 HET FN2549-S Chr4 29016773 29016774 0 0 Insertion 1 HET FN2549-S Chr4 4642319 A-G 0 0 Single Base Substitution 0 Homo FN2549-S Chr5 12131073 12131074 0 0 Deletion 1 HET FN2549-S Chr5 17268424 17268425 0 0 Deletion 1 frameshift_variant HET LOC_Os05g29840 retrotransposon protein, putative, unclassified FN2549-S Chr5 1851214 Chr4 1112171 0 Translocation 0 FN2549-S Chr5 1851214 Chr4 1112171 0 Translocation 0 LOC_Os04g02850 pentatricopeptide, putative, expressed FN2549-S Chr5 19614520 C-G 0 0 Single Base Substitution 0 HET FN2549-S Chr5 26609545 27033185 0 0 Inversion 0 LOC_Os05g45920 S1 RNA binding domain containing protein, expressed FN2549-S Chr5 26609545 27033185 0 0 Inversion 0 LOC_Os05g46700 retrotransposon protein, putative, unclassified, expressed FN2549-S Chr5 8554284 Chr2 14893235 0 Translocation 0 FN2549-S Chr5 9120922 9120923 0 0 Insertion 1 frameshift_variant HET LOC_Os05g16130 transposon protein, putative, unclassified, expressed FN2549-S Chr6 10428824 Chr4 742427 0 Translocation 0 FN2549-S Chr6 1120901 G-A 0 0 Single Base Substitution 0 HET FN2549-S Chr6 11647912 11647913 0 0 Deletion 1 HET FN2549-S Chr6 14715432 14715433 0 0 Deletion 1 HET FN2549-S Chr6 18029567 Chr1 15311960 0 Translocation 0 LOC_Os01g27430 retrotransposon protein, putative, unclassified, expressed FN2549-S Chr6 18029567 Chr1 15311960 0 Translocation 0 LOC_Os06g30990 retrotransposon protein, putative, unclassified, expressed FN2549-S Chr6 29311611 29311612 0 0 Insertion 1 HET FN2549-S Chr6 5460172 G-T 0 0 Single Base Substitution 0 HET FN2549-S Chr6 9792073 Chr5 5048142 0 Translocation 0 LOC_Os05g09080 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2549-S Chr6 9792073 Chr5 5048142 0 Translocation 0 LOC_Os06g16890 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2549-S Chr7 14141756 14141758 0 0 Insertion 2 HET FN2549-S Chr7 1507700 1507718 0 0 Deletion 18 HET FN2549-S Chr7 16486252 Chr5 5101464 0 Translocation 0 FN2549-S Chr7 18889188 18889189 0 0 Insertion 1 HET FN2549-S Chr7 21110377 21110378 0 0 Insertion 1 HET FN2549-S Chr8 10129284 Chr7 5928609 0 Translocation 0 FN2549-S Chr8 16126126 16126127 0 0 Insertion 1 HET FN2549-S Chr8 16257741 16257751 0 0 Insertion 10 HET FN2549-S Chr8 25588496 C-T 0 0 Single Base Substitution 0 HET FN2549-S Chr8 2824391 2824392 0 0 Insertion 1 frameshift_variant HET LOC_Os08g05360 transposon protein, putative, unclassified, expressed FN2549-S Chr8 5022341 5022344 0 0 Insertion 3 HET FN2549-S Chr8 6526988 Chr4 1144267 0 Translocation 0 FN2549-S Chr8 806229 Chr3 16461419 0 Translocation 0 FN2549-S Chr8 8285311 C-T 0 0 Single Base Substitution 0 HET FN2549-S Chr8 9186171 C-T 0 0 Single Base Substitution 0 Homo FN2549-S Chr8 9778609 C-A 0 0 Single Base Substitution 0 Homo FN2549-S Chr9 10121837 C-T 0 0 Single Base Substitution 0 HET FN2549-S Chr9 10182907 Chr7 29478872 0 Translocation 0 FN2549-S Chr9 10182907 Chr7 29478872 0 Translocation 0 LOC_Os07g49230 ubiquitin-activating enzyme, putative, expressed FN2549-S Chr9 17863237 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os09g29404 glycogen operon protein glgX, putative, expressed FN2549-S Chr9 5260299 5260300 0 0 Deletion 1 frameshift_variant HET LOC_Os09g09720 retrotransposon protein, putative, unclassified FN2549-S Chr9 5448656 T-A 0 0 Single Base Substitution 0 HET FN2549-S Chr9 5821147 Chr6 691536 0 Translocation 0