FN2558-S Chr1 1681452 G-A 0 0 Single Base Substitution 0 HET FN2558-S Chr1 22651497 22651499 0 0 Deletion 2 HET FN2558-S Chr1 24031559 C-T 0 0 Single Base Substitution 0 HET FN2558-S Chr1 29509201 G-T 0 0 Single Base Substitution 0 HET FN2558-S Chr1 36232799 C-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g62584 peptidase aspartic family protein, putative, expressed FN2558-S Chr1 41706941 41707128 0 0 Inversion 0 FN2558-S Chr1 54708 A-G 0 0 Single Base Substitution 0 Homo FN2558-S Chr10 10699298 10699305 0 0 Deletion 7 Homo FN2558-S Chr10 12090595 T-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os10g23180 cytochrome P450, putative, expressed FN2558-S Chr10 14606848 C-T 0 0 Single Base Substitution 0 HET FN2558-S Chr10 18925179 T-C 0 0 Single Base Substitution 0 FN2558-S Chr10 425455 G-A 0 0 Single Base Substitution 0 HET FN2558-S Chr10 8635061 C-T 0 0 Single Base Substitution 0 HET FN2558-S Chr11 11499732 G-T 0 0 Single Base Substitution 0 Homo FN2558-S Chr11 18526081 Chr6 9190430 0 Translocation 0 LOC_Os11g31680 retrotransposon protein, putative, unclassified, expressed FN2558-S Chr11 18614296 Chr3 28406521 0 Translocation 0 FN2558-S Chr11 18653972 Chr3 28443048 0 Translocation 0 LOC_Os11g31780 expressed protein FN2558-S Chr11 19980093 19980095 0 0 Deletion 2 Homo FN2558-S Chr11 9497409 9497416 0 0 Deletion 7 Homo FN2558-S Chr12 16443136 16443138 0 0 Insertion 2 HET FN2558-S Chr12 1739458 T-A 0 0 Single Base Substitution 0 HET FN2558-S Chr12 17540369 G-T 0 0 Single Base Substitution 0 Homo FN2558-S Chr12 1999280 1999282 0 0 Deletion 2 Homo FN2558-S Chr12 395411 395427 0 0 Deletion 16 HET FN2558-S Chr12 854950 854964 0 0 Deletion 14 frameshift_variant Homo LOC_Os12g02500 esterase, putative, expressed FN2558-S Chr2 12006070 12006071 0 0 Deletion 1 Homo FN2558-S Chr2 12388963 C-T 0 0 Single Base Substitution 0 STOP_GAINED Homo LOC_Os02g20950 expressed protein FN2558-S Chr2 15605485 Chr1 17178524 0 Translocation 0 FN2558-S Chr2 23567659 C-G 0 0 Single Base Substitution 0 HET FN2558-S Chr2 24079212 24079315 0 0 Inversion 0 FN2558-S Chr2 27862598 G-A 0 0 Single Base Substitution 0 Homo FN2558-S Chr2 34424001 34560000 0 0 Deletion 135999 LOC_Os02g56260 expressed protein FN2558-S Chr2 34424001 34560000 0 0 Deletion 135999 LOC_Os02g56270 ENTH domain containing protein, expressed FN2558-S Chr2 34424001 34560000 0 0 Deletion 135999 LOC_Os02g56280 zinc finger family protein, putative, expressed FN2558-S Chr2 34424001 34560000 0 0 Deletion 135999 LOC_Os02g56290 expressed protein FN2558-S Chr2 34424001 34560000 0 0 Deletion 135999 LOC_Os02g56300 aminotransferase, classes I and II, domain containing protein, expressed FN2558-S Chr2 34424001 34560000 0 0 Deletion 135999 LOC_Os02g56310 calcium-dependent protein kinase isoform AK1, putative, expressed FN2558-S Chr2 34424001 34560000 0 0 Deletion 135999 LOC_Os02g56320 glycogen synthase 1, putative, expressed FN2558-S Chr2 34424001 34560000 0 0 Deletion 135999 LOC_Os02g56334 OsWAK18b - OsWAK short gene, expressed FN2558-S Chr2 34424001 34560000 0 0 Deletion 135999 LOC_Os02g56340 expressed protein FN2558-S Chr2 34424001 34560000 0 0 Deletion 135999 LOC_Os02g56350 OsWAK19 - OsWAK short gene, expressed FN2558-S Chr2 34424001 34560000 0 0 Deletion 135999 LOC_Os02g56354 transposon protein, putative, unclassified, expressed FN2558-S Chr2 34424001 34560000 0 0 Deletion 135999 LOC_Os02g56360 expressed protein FN2558-S Chr2 34424001 34560000 0 0 Deletion 135999 LOC_Os02g56370 OsWAK20 - OsWAK receptor-like protein kinase, expressed FN2558-S Chr2 34424001 34560000 0 0 Deletion 135999 LOC_Os02g56380 OsWAK21 - OsWAK receptor-like cytoplasmic kinase OsWAK-RLCK, expressed FN2558-S Chr2 34424001 34560000 0 0 Deletion 135999 LOC_Os02g56390 transposon protein, putative, unclassified, expressed FN2558-S Chr2 34424001 34560000 0 0 Deletion 135999 LOC_Os02g56400 OsWAK22 - OsWAK receptor-like protein kinase, expressed FN2558-S Chr2 34424001 34560000 0 0 Deletion 135999 LOC_Os02g56410 retrotransposon protein, putative, Ty3-gypsy subclass FN2558-S Chr2 34424001 34560000 0 0 Deletion 135999 LOC_Os02g56420 OsWAK23 - OsWAK short gene, expressed FN2558-S Chr2 34424001 34560000 0 0 Deletion 135999 LOC_Os02g56440 expressed protein FN2558-S Chr2 4591125 G-C 0 0 Single Base Substitution 0 HET FN2558-S Chr3 11818621 11818625 0 0 Deletion 4 HET FN2558-S Chr3 17095149 G-A 0 0 Single Base Substitution 0 Homo FN2558-S Chr3 17814406 C-T 0 0 Single Base Substitution 0 HET FN2558-S Chr3 20201233 C-T 0 0 Single Base Substitution 0 Homo FN2558-S Chr3 28406437 28443044 0 0 Inversion 0 FN2558-S Chr3 33516840 T-G 0 0 Single Base Substitution 0 Homo FN2558-S Chr3 35325991 C-T 0 0 Single Base Substitution 0 HET FN2558-S Chr3 5725001 5850000 0 0 Deletion 124999 LOC_Os03g11120 methionyl-tRNA synthetase, putative, expressed FN2558-S Chr3 5725001 5850000 0 0 Deletion 124999 LOC_Os03g11130 expressed protein FN2558-S Chr3 5725001 5850000 0 0 Deletion 124999 LOC_Os03g11140 pleckstrin homology domain-containing protein-related taxo, putative, expressed FN2558-S Chr3 5725001 5850000 0 0 Deletion 124999 LOC_Os03g11150 expressed protein FN2558-S Chr3 5725001 5850000 0 0 Deletion 124999 LOC_Os03g11160 cysteine proteinase inhibitor precursor, putative, expressed FN2558-S Chr3 5725001 5850000 0 0 Deletion 124999 LOC_Os03g11170 cysteine proteinase inhibitor precursor, putative, expressed FN2558-S Chr3 5725001 5850000 0 0 Deletion 124999 LOC_Os03g11180 cysteine proteinase inhibitor 6 precursor, putative, expressed FN2558-S Chr3 5725001 5850000 0 0 Deletion 124999 LOC_Os03g11190 expressed protein FN2558-S Chr3 5725001 5850000 0 0 Deletion 124999 LOC_Os03g11200 pre-mRNA-processing factor 39, putative, expressed FN2558-S Chr3 5725001 5850000 0 0 Deletion 124999 LOC_Os03g11210 DUF538 domain containing protein, putative, expressed FN2558-S Chr3 5725001 5850000 0 0 Deletion 124999 LOC_Os03g11220 keratin, type I cytoskeletal 9, putative, expressed FN2558-S Chr3 5725001 5850000 0 0 Deletion 124999 LOC_Os03g11230 expressed protein FN2558-S Chr3 5725001 5850000 0 0 Deletion 124999 LOC_Os03g11240 nucleotidyltransferase, putative, expressed FN2558-S Chr3 5725001 5850000 0 0 Deletion 124999 LOC_Os03g11250 expressed protein FN2558-S Chr3 5725001 5850000 0 0 Deletion 124999 LOC_Os03g11260 RING zinc finger protein-like, putative, expressed FN2558-S Chr3 5725001 5850000 0 0 Deletion 124999 LOC_Os03g11270 expressed protein FN2558-S Chr3 5725001 5850000 0 0 Deletion 124999 LOC_Os03g11280 expressed protein FN2558-S Chr3 5725001 5850000 0 0 Deletion 124999 LOC_Os03g11290 expressed protein FN2558-S Chr3 5725001 5850000 0 0 Deletion 124999 LOC_Os03g11300 expressed protein FN2558-S Chr3 5725001 5850000 0 0 Deletion 124999 LOC_Os03g11310 PPR repeat domain containing protein, putative, expressed FN2558-S Chr3 5725001 5850000 0 0 Deletion 124999 LOC_Os03g11320 heparanase-like protein precursor, putative, expressed FN2558-S Chr3 5725001 5850000 0 0 Deletion 124999 LOC_Os03g11330 glycosyl transferase 8 domain containing protein, putative, expressed FN2558-S Chr3 5725001 5850000 0 0 Deletion 124999 LOC_Os03g11335 expressed protein FN2558-S Chr3 5725001 5850000 0 0 Deletion 124999 LOC_Os03g11340 leucine-rich repeat resistance protein, putative, expressed FN2558-S Chr3 5725001 5850000 0 0 Deletion 124999 LOC_Os03g11350 UDP-glucoronosyl and UDP-glucosyl transferase, putative, expressed FN2558-S Chr3 8554637 8554647 0 0 Deletion 10 Homo FN2558-S Chr4 12410403 12410414 0 0 Deletion 11 Homo FN2558-S Chr4 246748 246753 0 0 Deletion 5 frameshift_variant HET LOC_Os04g01320 serine/threonine-protein kinase receptor precursor, putative, expressed FN2558-S Chr4 26835833 G-A 0 0 Single Base Substitution 0 HET FN2558-S Chr4 29932146 C-T 0 0 Single Base Substitution 0 HET FN2558-S Chr4 30151336 G-A 0 0 Single Base Substitution 0 HET FN2558-S Chr4 32486615 G-T 0 0 Single Base Substitution 0 HET FN2558-S Chr4 696565 696571 0 0 Deletion 6 HET FN2558-S Chr4 696576 696582 0 0 Deletion 6 HET FN2558-S Chr5 10099712 G-C 0 0 Single Base Substitution 0 Homo FN2558-S Chr5 10164883 C-G 0 0 Single Base Substitution 0 HET FN2558-S Chr5 12223985 T-C 0 0 Single Base Substitution 0 Homo FN2558-S Chr5 12361104 C-T 0 0 Single Base Substitution 0 Homo FN2558-S Chr5 16803833 G-A 0 0 Single Base Substitution 0 HET FN2558-S Chr5 21212001 21212011 0 0 Deletion 10 frameshift_variant HET LOC_Os05g35730 hydrolase, alpha/beta fold family domain containing protein, expressed FN2558-S Chr5 25440489 T-C 0 0 Single Base Substitution 0 HET FN2558-S Chr5 25970885 G-A 0 0 Single Base Substitution 0 HET FN2558-S Chr5 6194813 6194814 0 0 Deletion 1 Homo FN2558-S Chr5 808695 C-A 0 0 Single Base Substitution 0 HET FN2558-S Chr6 11430786 G-C 0 0 Single Base Substitution 0 HET FN2558-S Chr6 12151929 12152166 0 0 Inversion 0 FN2558-S Chr6 12151929 12152166 0 0 Inversion 0 LOC_Os06g21040 transposon protein, putative, CACTA, En/Spm sub-class FN2558-S Chr6 15597848 G-A 0 0 Single Base Substitution 0 HET FN2558-S Chr6 17904098 17904100 0 0 Deletion 2 Homo FN2558-S Chr6 2108424 2108426 0 0 Deletion 2 frameshift_variant HET LOC_Os06g04830 leucine rich repeat protein, putative, expressed FN2558-S Chr6 2121699 C-A 0 0 Single Base Substitution 0 HET FN2558-S Chr6 22304041 22304047 0 0 Deletion 6 Homo FN2558-S Chr6 25431684 C-A 0 0 Single Base Substitution 0 Homo FN2558-S Chr6 4409673 4409858 0 0 Inversion 0 FN2558-S Chr6 775376 775508 0 0 Inversion 0 FN2558-S Chr6 9662571 9662572 0 0 Deletion 1 Homo FN2558-S Chr7 10705333 C-T 0 0 Single Base Substitution 0 Homo FN2558-S Chr7 22021662 G-A 0 0 Single Base Substitution 0 Homo FN2558-S Chr8 16031222 C-A 0 0 Single Base Substitution 0 HET FN2558-S Chr8 25555503 25555506 0 0 Deletion 3 Homo FN2558-S Chr8 26234518 T-C 0 0 Single Base Substitution 0 HET FN2558-S Chr8 6502071 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os08g11050 retrotransposon protein, putative, unclassified, expressed FN2558-S Chr9 11468267 G-A 0 0 Single Base Substitution 0 HET FN2558-S Chr9 18654061 18654062 0 0 Insertion 1 HET FN2558-S Chr9 4155116 C-T 0 0 Single Base Substitution 0 Homo FN2558-S Chr9 4951254 C-T 0 0 Single Base Substitution 0 STOP_GAINED Homo LOC_Os09g09240 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2558-S Chr9 9146736 G-A 0 0 Single Base Substitution 0 HET