FN2562-S Chr1 19331298 19331300 0 0 Insertion 2 HET FN2562-S Chr1 22163654 22163840 0 0 Inversion 0 LOC_Os01g39380 SCD1, putative, expressed FN2562-S Chr1 23971288 23971553 0 0 Inversion 0 LOC_Os01g42280 pentatricopeptide, putative, expressed FN2562-S Chr1 39536349 G-A 0 0 Single Base Substitution 0 HET FN2562-S Chr1 452281 452301 0 0 Deletion 20 HET FN2562-S Chr1 4577769 4578016 0 0 Inversion 0 FN2562-S Chr1 4733220 C-T 0 0 Single Base Substitution 0 HET FN2562-S Chr1 9383001 9395000 0 0 Deletion 11999 LOC_Os01g16530 OsClp1 - Putative Clp protease homologue, expressed FN2562-S Chr1 9383001 9395000 0 0 Deletion 11999 LOC_Os01g16540 NEDD8-activating enzyme E1 catalytic subunit, putative, expressed FN2562-S Chr1 9383001 9395000 0 0 Deletion 11999 LOC_Os01g16550 expressed protein FN2562-S Chr1 9632093 C-G 0 0 Single Base Substitution 0 Homo FN2562-S Chr10 1569997 1570005 0 0 Deletion 8 HET FN2562-S Chr10 20126496 20126502 0 0 Deletion 6 disruptive_inframe_deletion HET LOC_Os10g37610 retrotransposon protein, putative, unclassified, expressed FN2562-S Chr10 9899038 T-C 0 0 Single Base Substitution 0 Homo FN2562-S Chr11 10196191 T-G 0 0 Single Base Substitution 0 HET FN2562-S Chr11 11724839 G-A 0 0 Single Base Substitution 0 HET FN2562-S Chr11 12488241 12488307 0 0 Deletion 66 HET FN2562-S Chr11 18744799 18745017 0 0 Inversion 0 LOC_Os11g31890 NLI interacting factor-like phosphatase, putative, expressed FN2562-S Chr11 18849344 19096379 0 0 Inversion 0 LOC_Os11g31990 retrotransposon protein, putative, unclassified, expressed FN2562-S Chr11 18849344 19096379 0 0 Inversion 0 LOC_Os11g32330 retrotransposon protein, putative, unclassified FN2562-S Chr11 19096390 19173182 0 0 Inversion 0 LOC_Os11g32330 retrotransposon protein, putative, unclassified FN2562-S Chr11 19096390 19173182 0 0 Inversion 0 LOC_Os11g32480 TPR repeat region family protein, expressed FN2562-S Chr11 19669103 A-G 0 0 Single Base Substitution 0 HET FN2562-S Chr11 8551222 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os11g15170 transposon protein, putative, unclassified, expressed FN2562-S Chr12 16324591 T-A 0 0 Single Base Substitution 0 HET FN2562-S Chr12 21002807 C-G 0 0 Single Base Substitution 0 HET FN2562-S Chr12 21847224 21847230 0 0 Deletion 6 HET FN2562-S Chr12 22807503 22807507 0 0 Deletion 4 frameshift_variant HET LOC_Os12g37190 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2562-S Chr12 22985686 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g37450 transposon protein, putative, unclassified, expressed FN2562-S Chr12 23507074 23507079 0 0 Deletion 5 Homo FN2562-S Chr12 3243332 C-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g06670 protein kinase family protein, putative, expressed FN2562-S Chr2 25659240 25659345 0 0 Inversion 0 LOC_Os02g42650 expansin precursor, putative, expressed FN2562-S Chr2 31354246 31354263 0 0 Deletion 17 HET FN2562-S Chr2 33350716 G-A 0 0 Single Base Substitution 0 HET FN2562-S Chr2 8165973 A-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os02g14760 CID11, putative, expressed FN2562-S Chr3 15533884 C-T 0 0 Single Base Substitution 0 Homo FN2562-S Chr3 17348492 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g30430 nitrilase-associated protein, putative, expressed FN2562-S Chr3 17801528 17801541 0 0 Deletion 13 HET FN2562-S Chr3 18097368 18097382 0 0 Deletion 14 HET FN2562-S Chr3 22178010 A-T 0 0 Single Base Substitution 0 HET FN2562-S Chr3 26897280 C-T 0 0 Single Base Substitution 0 HET FN2562-S Chr3 4973989 4973990 0 0 Deletion 1 HET FN2562-S Chr4 10422512 10422617 0 0 Inversion 0 FN2562-S Chr4 14223449 T-C 0 0 Single Base Substitution 0 HET FN2562-S Chr4 18645066 18645074 0 0 Deletion 8 HET FN2562-S Chr4 21592832 21592833 0 0 Insertion 1 frameshift_variant HET LOC_Os04g35480 CDK5RAP1, putative, expressed FN2562-S Chr4 25528758 25528759 0 0 Insertion 1 HET FN2562-S Chr4 35358223 35358332 0 0 Inversion 0 FN2562-S Chr5 15947729 C-T 0 0 Single Base Substitution 0 HET FN2562-S Chr5 21162834 21162839 0 0 Deletion 5 HET FN2562-S Chr5 2176739 Chr1 14694252 0 Translocation 0 LOC_Os01g25900 retrotransposon protein, putative, unclassified, expressed FN2562-S Chr5 2176739 Chr1 14694252 0 Translocation 0 LOC_Os05g04630 retrotransposon protein, putative, SINE subclass, expressed FN2562-S Chr5 2285849 Chr1 14694461 0 Translocation 0 FN2562-S Chr5 2285849 Chr1 14694461 0 Translocation 0 LOC_Os01g25900 retrotransposon protein, putative, unclassified, expressed FN2562-S Chr5 2348565 2419793 0 0 Inversion 0 FN2562-S Chr5 24259200 T-G 0 0 Single Base Substitution 0 HET FN2562-S Chr5 27557932 27558200 0 0 Inversion 0 LOC_Os05g48060 phosphatidylserine synthase, putative, expressed FN2562-S Chr5 6980346 6980570 0 0 Inversion 0 FN2562-S Chr5 9239325 9239333 0 0 Deletion 8 HET FN2562-S Chr6 14013392 T-A 0 0 Single Base Substitution 0 HET FN2562-S Chr6 1480521 2381886 0 0 Inversion 0 LOC_Os06g03750 dehydration response related protein, putative, expressed FN2562-S Chr6 1480521 2381886 0 0 Inversion 0 LOC_Os06g05284 transferase family protein, putative, expressed FN2562-S Chr6 1480525 2381904 0 0 Inversion 0 LOC_Os06g03750 dehydration response related protein, putative, expressed FN2562-S Chr6 1480525 2381904 0 0 Inversion 0 LOC_Os06g05284 transferase family protein, putative, expressed FN2562-S Chr6 1481258 A-G 0 0 Single Base Substitution 0 Homo FN2562-S Chr6 15109188 G-A 0 0 Single Base Substitution 0 HET FN2562-S Chr6 16374435 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os06g28750 retrotransposon protein, putative, Ty1-copia subclass, expressed FN2562-S Chr6 17426312 C-G 0 0 Single Base Substitution 0 HET FN2562-S Chr6 22200893 T-C 0 0 Single Base Substitution 0 HET FN2562-S Chr6 22661402 T-A 0 0 Single Base Substitution 0 Homo FN2562-S Chr6 24337976 24338134 0 0 Inversion 0 LOC_Os06g40790 MLO domain containing protein, putative, expressed FN2562-S Chr6 30863486 30863487 0 0 Deletion 1 Homo FN2562-S Chr6 402710 402860 0 0 Inversion 0 LOC_Os06g01670 myb-like DNA-binding domain containing protein, expressed FN2562-S Chr6 8100871 A-T 0 0 Single Base Substitution 0 HET FN2562-S Chr7 10267466 T-A 0 0 Single Base Substitution 0 HET FN2562-S Chr7 15272352 15272467 0 0 Inversion 0 FN2562-S Chr7 17560179 17560181 0 0 Insertion 2 HET FN2562-S Chr7 20859206 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os07g34810 transposon protein, putative, unclassified, expressed FN2562-S Chr7 20949814 20949815 0 0 Deletion 1 Homo FN2562-S Chr7 20983879 20983885 0 0 Deletion 6 Homo FN2562-S Chr7 26560001 26575000 0 0 Deletion 14999 LOC_Os07g44470 expressed protein FN2562-S Chr7 26560001 26575000 0 0 Deletion 14999 LOC_Os07g44480 peroxidase, putative, expressed FN2562-S Chr7 26560001 26575000 0 0 Deletion 14999 LOC_Os07g44499 peroxidase, putative, expressed FN2562-S Chr7 6535035 A-G 0 0 Single Base Substitution 0 HET FN2562-S Chr8 16585240 C-T 0 0 Single Base Substitution 0 HET FN2562-S Chr8 16585241 C-T 0 0 Single Base Substitution 0 HET FN2562-S Chr8 16585242 A-G 0 0 Single Base Substitution 0 HET FN2562-S Chr8 18632145 G-T 0 0 Single Base Substitution 0 HET FN2562-S Chr8 20641518 20641647 0 0 Inversion 0 FN2562-S Chr8 23253605 G-A 0 0 Single Base Substitution 0 HET FN2562-S Chr8 23953267 T-C 0 0 Single Base Substitution 0 HET FN2562-S Chr8 25954157 A-C 0 0 Single Base Substitution 0 HET FN2562-S Chr8 8050583 8050589 0 0 Deletion 6 HET FN2562-S Chr9 13731582 13731587 0 0 Deletion 5 HET FN2562-S Chr9 16875754 G-A 0 0 Single Base Substitution 0 HET FN2562-S Chr9 17283553 C-T 0 0 Single Base Substitution 0 HET FN2562-S Chr9 4620388 T-A 0 0 Single Base Substitution 0 HET