FN2574-S Chr1 16719702 T-A 0 0 Single Base Substitution 0 HET FN2574-S Chr1 19947889 19947890 0 0 Insertion 1 HET FN2574-S Chr1 26954868 G-A 0 0 Single Base Substitution 0 HET FN2574-S Chr1 293270 293277 0 0 Deletion 7 frameshift_variant HET LOC_Os01g01580 expressed protein FN2574-S Chr1 32801800 A-T 0 0 Single Base Substitution 0 HET FN2574-S Chr1 36199271 36199277 0 0 Insertion 6 HET FN2574-S Chr1 4296957 C-A 0 0 Single Base Substitution 0 HET FN2574-S Chr10 166124 Chr9 15101613 0 Translocation 0 FN2574-S Chr10 19519145 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os10g36490 HEAT repeat family protein, putative, expressed FN2574-S Chr10 21218280 C-T 0 0 Single Base Substitution 0 Homo FN2574-S Chr10 9367278 Chr7 8230005 0 Translocation 0 LOC_Os07g14410 retrotransposon protein, putative, Ty1-copia subclass, expressed FN2574-S Chr10 9367278 Chr7 8230005 0 Translocation 0 LOC_Os10g18430 agmatine coumaroyltransferase, putative, expressed FN2574-S Chr11 16848069 G-A 0 0 Single Base Substitution 0 HET FN2574-S Chr11 17696882 T-C 0 0 Single Base Substitution 0 Homo FN2574-S Chr11 19619708 Chr4 2530360 0 Translocation 0 FN2574-S Chr11 19619708 Chr4 2530360 0 Translocation 0 LOC_Os04g05104 retrotransposon protein, putative, unclassified, expressed FN2574-S Chr11 23075748 T-A 0 0 Single Base Substitution 0 HET FN2574-S Chr11 23663019 Chr6 11605812 0 Translocation 0 FN2574-S Chr11 25275166 25275186 0 0 Insertion 20 HET FN2574-S Chr11 25654167 25654168 0 0 Insertion 1 HET FN2574-S Chr11 27121678 27121718 0 0 Insertion 40 HET FN2574-S Chr11 27186171 Chr4 10494822 0 Translocation 0 FN2574-S Chr12 10847965 Chr8 3231393 0 Translocation 0 FN2574-S Chr12 11886952 Chr5 9719739 0 Translocation 0 FN2574-S Chr12 11886952 Chr5 9719739 0 Translocation 0 LOC_Os05g17040 retrotransposon protein, putative, unclassified, expressed FN2574-S Chr12 12652926 Chr4 9008286 0 Translocation 0 LOC_Os04g16570 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2574-S Chr12 12652926 Chr4 9008286 0 Translocation 0 LOC_Os12g22410 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2574-S Chr12 14985567 Chr10 9134148 0 Translocation 0 LOC_Os12g25830 retrotransposon protein, putative, unclassified, expressed FN2574-S Chr12 15943162 T-G 0 0 Single Base Substitution 0 Homo FN2574-S Chr12 16158549 Chr5 9093584 0 Translocation 0 FN2574-S Chr12 16562361 Chr9 9542562 0 Translocation 0 FN2574-S Chr12 17475804 Chr11 5494640 0 Translocation 0 FN2574-S Chr12 21860853 21860854 0 0 Deletion 1 HET FN2574-S Chr12 21982395 21982396 0 0 Insertion 1 HET FN2574-S Chr12 22176185 Chr2 10452257 0 Translocation 0 LOC_Os12g36180 auxilin, putative, expressed FN2574-S Chr12 23385766 A-G 0 0 Single Base Substitution 0 Homo FN2574-S Chr12 25846029 25846035 0 0 Deletion 6 HET FN2574-S Chr12 25959922 Chr7 2494673 0 Translocation 0 FN2574-S Chr12 26329059 26329060 0 0 Insertion 1 HET FN2574-S Chr12 27162429 T-A 0 0 Single Base Substitution 0 Homo FN2574-S Chr12 5460989 Chr3 32963678 0 Translocation 0 FN2574-S Chr12 5460989 Chr3 32963678 0 Translocation 0 LOC_Os03g57854 MBTB3 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed FN2574-S Chr12 9571856 9577575 0 0 Inversion 0 LOC_Os12g16710 retrotransposon protein, putative, Ty1-copia subclass, expressed FN2574-S Chr12 9571860 9577581 0 0 Inversion 0 LOC_Os12g16710 retrotransposon protein, putative, Ty1-copia subclass, expressed FN2574-S Chr2 13261358 Chr1 42763705 0 Translocation 0 FN2574-S Chr2 16230649 16230650 0 0 Insertion 1 HET FN2574-S Chr2 26737175 C-T 0 0 Single Base Substitution 0 HET FN2574-S Chr2 30415172 A-G 0 0 Single Base Substitution 0 HET FN2574-S Chr2 8101494 C-T 0 0 Single Base Substitution 0 HET FN2574-S Chr3 1019154 T-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os03g02710 hydroxymethylglutaryl-CoA synthase, putative, expressed FN2574-S Chr3 16675312 16675313 0 0 Deletion 1 HET FN2574-S Chr3 25386275 Chr1 531828 0 Translocation 0 FN2574-S Chr3 29761888 Chr1 9052666 0 Translocation 0 FN2574-S Chr3 31099957 31099958 0 0 Insertion 1 HET FN2574-S Chr3 7117815 C-T 0 0 Single Base Substitution 0 Homo FN2574-S Chr3 7553402 7553404 0 0 Deletion 2 frameshift_variant HET LOC_Os03g13920 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2574-S Chr4 22148730 Chr3 15326902 0 Translocation 0 FN2574-S Chr4 2368769 2368771 0 0 Deletion 2 HET FN2574-S Chr4 29010566 T-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g48660 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2574-S Chr4 3357340 A-T 0 0 Single Base Substitution 0 HET FN2574-S Chr4 34006558 Chr1 9105804 0 Translocation 0 FN2574-S Chr4 5880103 5880104 0 0 Insertion 1 HET FN2574-S Chr4 7963105 7963106 0 0 Deletion 1 HET FN2574-S Chr5 12928235 Chr2 474613 0 Translocation 0 FN2574-S Chr5 24794995 T-C 0 0 Single Base Substitution 0 HET FN2574-S Chr5 26006328 Chr1 33853777 0 Translocation 0 LOC_Os01g58570 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2574-S Chr5 26006328 Chr1 33853777 0 Translocation 0 LOC_Os05g44730 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2574-S Chr5 26206227 C-T 0 0 Single Base Substitution 0 STOP_GAINED Homo LOC_Os05g45120 anthocyanidin 5,3-O-glucosyltransferase, putative, expressed FN2574-S Chr5 9889583 9889587 0 0 Insertion 4 frameshift_variant&stop_gained HET LOC_Os05g17270 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2574-S Chr6 13698852 Chr1 2504318 0 Translocation 0 FN2574-S Chr6 1886472 1886473 0 0 Insertion 1 HET FN2574-S Chr6 20416870 Chr5 24970035 0 Translocation 0 LOC_Os05g42980 expressed protein FN2574-S Chr6 20416870 Chr5 24970035 0 Translocation 0 LOC_Os06g35070 expressed protein FN2574-S Chr6 20501751 Chr1 11600020 0 Translocation 0 FN2574-S Chr6 20501751 Chr1 11600020 0 Translocation 0 LOC_Os01g20820 expressed protein FN2574-S Chr6 22800167 Chr2 17256809 0 Translocation 0 LOC_Os06g38470 histone deacetylase 19, putative, expressed FN2574-S Chr6 25369103 C-T 0 0 Single Base Substitution 0 HET FN2574-S Chr6 25817901 25817902 0 0 Insertion 1 HET FN2574-S Chr6 27184586 C-T 0 0 Single Base Substitution 0 HET FN2574-S Chr7 11606726 11606727 0 0 Deletion 1 HET FN2574-S Chr7 15412001 15434000 0 0 Deletion 21999 LOC_Os07g26700 UPF0041 domain containing protein, putative, expressed FN2574-S Chr7 17538488 Chr1 15921904 0 Translocation 0 FN2574-S Chr7 17960280 17960284 0 0 Deletion 4 HET FN2574-S Chr7 21304968 C-T 0 0 Single Base Substitution 0 Homo FN2574-S Chr7 26317983 Chr5 17700443 0 Translocation 0 FN2574-S Chr7 3639162 3639171 0 0 Insertion 9 HET FN2574-S Chr7 7882486 7882487 0 0 Insertion 1 HET FN2574-S Chr8 11235992 11235993 0 0 Insertion 1 HET FN2574-S Chr8 22804004 Chr3 5888251 0 Translocation 0 FN2574-S Chr8 23349514 G-A 0 0 Single Base Substitution 0 HET FN2574-S Chr8 3252296 3252297 0 0 Deletion 1 HET FN2574-S Chr8 405085 T-C 0 0 Single Base Substitution 0 HET FN2574-S Chr8 523833 T-C 0 0 Single Base Substitution 0 HET FN2574-S Chr8 9663263 T-C 0 0 Single Base Substitution 0 HET FN2574-S Chr9 16162556 16162621 0 0 Deletion 65 splice_donor_variant&inframe_deletion&splice_region_variant&intron_variant HET LOC_Os09g26640 retrotransposon protein, putative, unclassified, expressed FN2574-S Chr9 20294529 Chr4 10954977 0 Translocation 0