FN2593-S Chr1 15659324 A-G 0 0 Single Base Substitution 0 HET FN2593-S Chr1 16702109 C-A 0 0 Single Base Substitution 0 HET FN2593-S Chr1 17230376 G-C 0 0 Single Base Substitution 0 HET FN2593-S Chr1 19422957 C-T 0 0 Single Base Substitution 0 HET FN2593-S Chr1 23236902 23236903 0 0 Deletion 1 HET FN2593-S Chr1 23510797 A-G 0 0 Single Base Substitution 0 HET FN2593-S Chr1 24085398 C-T 0 0 Single Base Substitution 0 HET FN2593-S Chr1 24465660 24465661 0 0 Deletion 1 HET FN2593-S Chr1 29347544 T-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g51080 retrotransposon protein, putative, unclassified, expressed FN2593-S Chr1 31264148 A-T 0 0 Single Base Substitution 0 HET FN2593-S Chr1 31793681 31793706 0 0 Deletion 25 HET FN2593-S Chr1 33828847 33828848 0 0 Deletion 1 HET FN2593-S Chr1 36592540 C-G 0 0 Single Base Substitution 0 HET FN2593-S Chr1 4985946 G-T 0 0 Single Base Substitution 0 HET FN2593-S Chr1 6251959 G-A 0 0 Single Base Substitution 0 HET FN2593-S Chr10 12173160 G-A 0 0 Single Base Substitution 0 HET FN2593-S Chr10 12214644 12214658 0 0 Deletion 14 HET FN2593-S Chr10 13406799 G-A 0 0 Single Base Substitution 0 HET FN2593-S Chr10 16574668 C-T 0 0 Single Base Substitution 0 HET FN2593-S Chr10 18614218 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os10g34884 RIPER7 - Ripening-related family protein precursor, expressed FN2593-S Chr10 5911834 Chr1 40364308 0 Translocation 0 FN2593-S Chr10 5911834 Chr1 40364308 0 Translocation 0 LOC_Os01g69850 OsMADS65 - MADS-box family gene with MIKC* type-box, expressed FN2593-S Chr10 5912329 Chr1 32728957 0 Translocation 0 FN2593-S Chr10 6253737 G-A 0 0 Single Base Substitution 0 HET FN2593-S Chr10 7145294 G-C 0 0 Single Base Substitution 0 HET FN2593-S Chr10 9599999 T-A 0 0 Single Base Substitution 0 HET FN2593-S Chr11 15982010 15982025 0 0 Deletion 15 disruptive_inframe_deletion Homo LOC_Os11g27760 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2593-S Chr11 21631117 C-T 0 0 Single Base Substitution 0 HET FN2593-S Chr11 25588744 25588754 0 0 Deletion 10 HET FN2593-S Chr11 27650729 27650734 0 0 Deletion 5 Homo FN2593-S Chr11 4548519 4548531 0 0 Insertion 12 HET FN2593-S Chr11 6517372 C-G 0 0 Single Base Substitution 0 HET FN2593-S Chr11 7128379 A-T 0 0 Single Base Substitution 0 HET FN2593-S Chr11 7409542 C-T 0 0 Single Base Substitution 0 HET FN2593-S Chr12 11947655 G-A 0 0 Single Base Substitution 0 Homo FN2593-S Chr12 19056536 C-A 0 0 Single Base Substitution 0 HET FN2593-S Chr12 2139652 2139667 0 0 Deletion 15 HET FN2593-S Chr12 22346733 T-G 0 0 Single Base Substitution 0 HET FN2593-S Chr12 23808719 C-A 0 0 Single Base Substitution 0 HET FN2593-S Chr12 2423086 G-A 0 0 Single Base Substitution 0 HET FN2593-S Chr12 24469670 C-T 0 0 Single Base Substitution 0 HET FN2593-S Chr12 485299 T-C 0 0 Single Base Substitution 0 HET FN2593-S Chr12 844707 A-G 0 0 Single Base Substitution 0 HET FN2593-S Chr2 11828630 C-T 0 0 Single Base Substitution 0 HET FN2593-S Chr2 14153741 C-T 0 0 Single Base Substitution 0 HET FN2593-S Chr2 14825055 G-T 0 0 Single Base Substitution 0 HET FN2593-S Chr2 14984942 G-A 0 0 Single Base Substitution 0 HET FN2593-S Chr2 3240688 3240714 0 0 Deletion 26 frameshift_variant HET LOC_Os02g06500 DSHCT domain containing protein, expressed FN2593-S Chr2 33628378 33628379 0 0 Deletion 1 frameshift_variant Homo LOC_Os02g54900 STE_PAK_Ste20_STLK.2 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed FN2593-S Chr2 3425163 3425165 0 0 Deletion 2 HET FN2593-S Chr2 666899 C-T 0 0 Single Base Substitution 0 HET FN2593-S Chr2 9520215 9520219 0 0 Deletion 4 HET FN2593-S Chr2 9787463 G-C 0 0 Single Base Substitution 0 HET FN2593-S Chr3 18259312 C-G 0 0 Single Base Substitution 0 HET FN2593-S Chr3 23608312 C-A 0 0 Single Base Substitution 0 HET FN2593-S Chr3 24733023 G-C 0 0 Single Base Substitution 0 HET FN2593-S Chr3 24952260 24952278 0 0 Deletion 18 Homo FN2593-S Chr3 27748220 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g48674 retrotransposon protein, putative, unclassified, expressed FN2593-S Chr3 29932634 C-G 0 0 Single Base Substitution 0 HET FN2593-S Chr3 5016883 5016887 0 0 Deletion 4 HET FN2593-S Chr3 5066304 5066312 0 0 Deletion 8 HET FN2593-S Chr3 5900746 Chr1 30113280 0 Translocation 0 LOC_Os03g11450 expressed protein FN2593-S Chr3 5908474 Chr1 30113267 0 Translocation 0 LOC_Os03g11460 expressed protein FN2593-S Chr3 692961 C-T 0 0 Single Base Substitution 0 HET FN2593-S Chr4 10518183 T-C 0 0 Single Base Substitution 0 HET FN2593-S Chr4 14959000 14959002 0 0 Deletion 2 HET FN2593-S Chr4 16117953 G-T 0 0 Single Base Substitution 0 HET FN2593-S Chr4 16117954 G-T 0 0 Single Base Substitution 0 HET FN2593-S Chr4 2042625 2042632 0 0 Deletion 7 HET FN2593-S Chr4 21061820 A-T 0 0 Single Base Substitution 0 HET FN2593-S Chr4 22497074 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g37840 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2593-S Chr4 24848174 G-A 0 0 Single Base Substitution 0 Homo FN2593-S Chr4 26276172 G-T 0 0 Single Base Substitution 0 HET FN2593-S Chr4 27634279 A-T 0 0 Single Base Substitution 0 Homo FN2593-S Chr4 29937697 T-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g50172 retrotransposon protein, putative, unclassified, expressed FN2593-S Chr4 7639581 7639609 0 0 Deletion 28 HET FN2593-S Chr5 11884231 G-T 0 0 Single Base Substitution 0 HET FN2593-S Chr5 12154674 C-G 0 0 Single Base Substitution 0 HET FN2593-S Chr5 14405226 C-T 0 0 Single Base Substitution 0 HET FN2593-S Chr5 15488327 C-G 0 0 Single Base Substitution 0 HET FN2593-S Chr5 20388355 20388356 0 0 Deletion 1 Homo FN2593-S Chr5 21703037 21703043 0 0 Deletion 6 Homo FN2593-S Chr5 22003789 A-C 0 0 Single Base Substitution 0 Homo FN2593-S Chr5 2629932 G-T 0 0 Single Base Substitution 0 HET FN2593-S Chr5 26700045 26700049 0 0 Deletion 4 frameshift_variant Homo LOC_Os05g46030 myosin head family protein, expressed FN2593-S Chr5 27280539 A-T 0 0 Single Base Substitution 0 HET FN2593-S Chr5 29546303 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g51520 expressed protein FN2593-S Chr5 6519464 T-A 0 0 Single Base Substitution 0 Homo FN2593-S Chr6 10806146 T-A 0 0 Single Base Substitution 0 HET FN2593-S Chr6 16226786 16226787 0 0 Insertion 1 HET FN2593-S Chr6 17022797 17022926 0 0 Inversion 0 FN2593-S Chr6 25347549 25347562 0 0 Deletion 13 frameshift_variant HET LOC_Os06g42220 TOO MANY MOUTHS precursor, putative, expressed FN2593-S Chr6 25475293 25475294 0 0 Deletion 1 frameshift_variant Homo LOC_Os06g42380 retrotransposon protein, putative, unclassified, expressed FN2593-S Chr6 28564994 A-G 0 0 Single Base Substitution 0 HET FN2593-S Chr6 8905841 8905842 0 0 Deletion 1 HET FN2593-S Chr7 11305134 C-A 0 0 Single Base Substitution 0 HET FN2593-S Chr7 13856124 13856135 0 0 Deletion 11 HET FN2593-S Chr7 28158747 28158752 0 0 Deletion 5 HET FN2593-S Chr8 11279970 11279971 0 0 Deletion 1 Homo FN2593-S Chr8 22054766 T-C 0 0 Single Base Substitution 0 Homo FN2593-S Chr8 2224640 G-A 0 0 Single Base Substitution 0 HET FN2593-S Chr8 3425235 G-T 0 0 Single Base Substitution 0 HET FN2593-S Chr8 4563265 C-A 0 0 Single Base Substitution 0 HET FN2593-S Chr8 534378 534385 0 0 Deletion 7 HET FN2593-S Chr8 559845 T-A 0 0 Single Base Substitution 0 HET FN2593-S Chr9 11046528 11046531 0 0 Deletion 3 Homo FN2593-S Chr9 14449744 14449756 0 0 Deletion 12 splice_acceptor_variant&inframe_deletion&splice_region_variant&intron_variant Homo LOC_Os09g24310 expressed protein FN2593-S Chr9 1610552 A-G 0 0 Single Base Substitution 0 HET FN2593-S Chr9 19043486 G-T 0 0 Single Base Substitution 0 HET FN2593-S Chr9 19792245 19792246 0 0 Deletion 1 HET FN2593-S Chr9 7306434 A-G 0 0 Single Base Substitution 0 HET FN2593-S Chr9 8677072 C-T 0 0 Single Base Substitution 0 HET