FN2602-S Chr1 19671802 G-A 0 0 Single Base Substitution 0 HET FN2602-S Chr1 20040060 C-T 0 0 Single Base Substitution 0 HET FN2602-S Chr1 27088636 27117447 0 0 Inversion 0 LOC_Os01g47410 aspartic proteinase oryzasin-1 precursor, putative, expressed FN2602-S Chr1 27088636 27117447 0 0 Inversion 0 LOC_Os01g47450 OsCttP1 - Putative C-terminal processing peptidase homologue, expressed FN2602-S Chr1 27089412 27117478 0 0 Inversion 0 LOC_Os01g47410 aspartic proteinase oryzasin-1 precursor, putative, expressed FN2602-S Chr1 27089412 27117478 0 0 Inversion 0 LOC_Os01g47450 OsCttP1 - Putative C-terminal processing peptidase homologue, expressed FN2602-S Chr1 35934616 35934617 0 0 Insertion 1 HET FN2602-S Chr1 38124447 G-A 0 0 Single Base Substitution 0 HET FN2602-S Chr1 7875153 C-T 0 0 Single Base Substitution 0 HET FN2602-S Chr10 15594276 G-A 0 0 Single Base Substitution 0 HET FN2602-S Chr10 2132773 A-C 0 0 Single Base Substitution 0 Homo FN2602-S Chr10 2701186 Chr1 39381271 0 Translocation 0 LOC_Os10g05470 expressed protein FN2602-S Chr10 701702 701703 0 0 Deletion 1 HET FN2602-S Chr11 10238573 C-T 0 0 Single Base Substitution 0 Homo FN2602-S Chr11 10994116 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os11g19230 retrotransposon protein, putative, Ty1-copia subclass, expressed FN2602-S Chr11 14848925 G-T 0 0 Single Base Substitution 0 HET FN2602-S Chr11 16452034 C-A 0 0 Single Base Substitution 0 HET FN2602-S Chr11 16452035 G-T 0 0 Single Base Substitution 0 HET FN2602-S Chr11 17542950 C-A 0 0 Single Base Substitution 0 STOP_GAINED Homo LOC_Os11g30170 transposon protein, putative, unclassified, expressed FN2602-S Chr11 18587230 C-T 0 0 Single Base Substitution 0 HET FN2602-S Chr11 20081952 G-C 0 0 Single Base Substitution 0 Homo FN2602-S Chr11 20227323 20228175 0 0 Deletion 852 HET FN2602-S Chr11 22327602 Chr6 17710070 0 Translocation 0 FN2602-S Chr11 22327602 Chr6 17710070 0 Translocation 0 LOC_Os06g30610 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2602-S Chr12 10343485 T-G 0 0 Single Base Substitution 0 HET FN2602-S Chr12 14956799 G-A 0 0 Single Base Substitution 0 HET FN2602-S Chr12 2518013 G-A 0 0 Single Base Substitution 0 HET FN2602-S Chr12 3088786 3088787 0 0 Deletion 1 HET FN2602-S Chr2 12416463 C-T 0 0 Single Base Substitution 0 HET FN2602-S Chr2 12832860 C-G 0 0 Single Base Substitution 0 HET FN2602-S Chr2 24049211 G-A 0 0 Single Base Substitution 0 Homo FN2602-S Chr2 24835038 T-G 0 0 Single Base Substitution 0 Homo FN2602-S Chr2 30727945 30727946 0 0 Deletion 1 HET FN2602-S Chr2 31043616 G-A 0 0 Single Base Substitution 0 HET FN2602-S Chr2 3400022 A-G 0 0 Single Base Substitution 0 HET FN2602-S Chr2 34490501 G-T 0 0 Single Base Substitution 0 HET FN2602-S Chr3 12770082 A-G 0 0 Single Base Substitution 0 Homo FN2602-S Chr3 13850849 C-T 0 0 Single Base Substitution 0 HET FN2602-S Chr3 14255790 Chr2 17025208 0 Translocation 0 LOC_Os02g28770 retrotransposon protein, putative, unclassified, expressed FN2602-S Chr3 14255790 Chr2 17025208 0 Translocation 0 LOC_Os03g24980 SWIM zinc finger family protein, putative FN2602-S Chr3 14861406 G-T 0 0 Single Base Substitution 0 HET FN2602-S Chr3 26484048 T-G 0 0 Single Base Substitution 0 HET FN2602-S Chr3 26703302 T-A 0 0 Single Base Substitution 0 HET FN2602-S Chr3 3032084 T-A 0 0 Single Base Substitution 0 HET FN2602-S Chr3 31353702 C-A 0 0 Single Base Substitution 0 HET FN2602-S Chr3 9575218 C-A 0 0 Single Base Substitution 0 Homo FN2602-S Chr4 22704544 22704545 0 0 Insertion 1 HET FN2602-S Chr4 23590517 C-T 0 0 Single Base Substitution 0 Homo FN2602-S Chr4 26807878 A-T 0 0 Single Base Substitution 0 HET FN2602-S Chr4 2734229 C-T 0 0 Single Base Substitution 0 STOP_GAINED HET LOC_Os04g05430 retrotransposon protein, putative, Ty1-copia subclass, expressed FN2602-S Chr4 29088001 29199000 0 0 Deletion 110999 LOC_Os04g48770 ubiquitin fusion degradation protein, putative, expressed FN2602-S Chr4 29088001 29199000 0 0 Deletion 110999 LOC_Os04g48780 transposon protein, putative, unclassified, expressed FN2602-S Chr4 29088001 29199000 0 0 Deletion 110999 LOC_Os04g48790 rhoGAP domain containing protein, expressed FN2602-S Chr4 29088001 29199000 0 0 Deletion 110999 LOC_Os04g48800 GDSL-like lipase/acylhydrolase, putative, expressed FN2602-S Chr4 29088001 29199000 0 0 Deletion 110999 LOC_Os04g48810 expressed protein FN2602-S Chr4 29088001 29199000 0 0 Deletion 110999 LOC_Os04g48820 deoxyribonuclease tatD, putative, expressed FN2602-S Chr4 29088001 29199000 0 0 Deletion 110999 LOC_Os04g48830 DUF623 domain containing protein, expressed FN2602-S Chr4 29088001 29199000 0 0 Deletion 110999 LOC_Os04g48840 expressed protein FN2602-S Chr4 29088001 29199000 0 0 Deletion 110999 LOC_Os04g48850 aminotransferase, classes I and II, domain containing protein, expressed FN2602-S Chr4 29088001 29199000 0 0 Deletion 110999 LOC_Os04g48870 nitrilase-associated protein, putative, expressed FN2602-S Chr4 29088001 29199000 0 0 Deletion 110999 LOC_Os04g48880 fatty acid hydroxylase, putative, expressed FN2602-S Chr4 29088001 29199000 0 0 Deletion 110999 LOC_Os04g48890 hypothetical protein FN2602-S Chr4 29088001 29199000 0 0 Deletion 110999 LOC_Os04g48900 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2602-S Chr4 29088001 29199000 0 0 Deletion 110999 LOC_Os04g48910 retrotransposon protein, putative, Ty3-gypsy subclass FN2602-S Chr4 29088001 29199000 0 0 Deletion 110999 LOC_Os04g48920 retrotransposon protein, putative, unclassified, expressed FN2602-S Chr4 29088001 29199000 0 0 Deletion 110999 LOC_Os04g48930 ferric-chelate reductase, putative, expressed FN2602-S Chr4 29088001 29199000 0 0 Deletion 110999 LOC_Os04g48940 uncharacterized mscS family protein, putative, expressed FN2602-S Chr4 29088001 29199000 0 0 Deletion 110999 LOC_Os04g48950 fringe-related protein, putative, expressed FN2602-S Chr4 29088001 29199000 0 0 Deletion 110999 LOC_Os04g48960 expressed protein FN2602-S Chr4 29206001 29478000 0 0 Deletion 271999 LOC_Os04g48980 hypothetical protein FN2602-S Chr4 29206001 29478000 0 0 Deletion 271999 LOC_Os04g49000 zinc finger, C3HC4 type domain containing protein, expressed FN2602-S Chr4 29206001 29478000 0 0 Deletion 271999 LOC_Os04g49010 retrotransposon protein, putative, unclassified FN2602-S Chr4 29206001 29478000 0 0 Deletion 271999 LOC_Os04g49020 retrotransposon protein, putative, unclassified FN2602-S Chr4 29206001 29478000 0 0 Deletion 271999 LOC_Os04g49030 retrotransposon protein, putative, unclassified FN2602-S Chr4 29206001 29478000 0 0 Deletion 271999 LOC_Os04g49040 retrotransposon protein, putative, unclassified, expressed FN2602-S Chr4 29206001 29478000 0 0 Deletion 271999 LOC_Os04g49050 expressed protein FN2602-S Chr4 29206001 29478000 0 0 Deletion 271999 LOC_Os04g49060 H-BTB3 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with H family conserved sequence, expressed FN2602-S Chr4 29206001 29478000 0 0 Deletion 271999 LOC_Os04g49070 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2602-S Chr4 29206001 29478000 0 0 Deletion 271999 LOC_Os04g49080 rRNA 2-O-methyltransferase fibrillarin, putative, expressed FN2602-S Chr4 29206001 29478000 0 0 Deletion 271999 LOC_Os04g49090 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2602-S Chr4 29206001 29478000 0 0 Deletion 271999 LOC_Os04g49100 retrotransposon protein, putative, Ty1-copia subclass, expressed FN2602-S Chr4 29206001 29478000 0 0 Deletion 271999 LOC_Os04g49110 GRAS family transcription factor domain containing protein, expressed FN2602-S Chr4 29206001 29478000 0 0 Deletion 271999 LOC_Os04g49120 retrotransposon protein, putative, LINE subclass FN2602-S Chr4 29206001 29478000 0 0 Deletion 271999 LOC_Os04g49130 ubiquitin-conjugating enzyme, putative, expressed FN2602-S Chr4 29206001 29478000 0 0 Deletion 271999 LOC_Os04g49140 expressed protein FN2602-S Chr4 29206001 29478000 0 0 Deletion 271999 LOC_Os04g49150 OsMADS17 - MADS-box family gene with MIKCc type-box, expressed FN2602-S Chr4 29206001 29478000 0 0 Deletion 271999 LOC_Os04g49160 zinc finger, C3HC4 type domain containing protein, expressed FN2602-S Chr4 29206001 29478000 0 0 Deletion 271999 LOC_Os04g49170 zinc finger, C3HC4 type domain containing protein, expressed FN2602-S Chr4 29206001 29478000 0 0 Deletion 271999 LOC_Os04g49180 expressed protein FN2602-S Chr4 29206001 29478000 0 0 Deletion 271999 LOC_Os04g49194 naringenin,2-oxoglutarate 3-dioxygenase, putative, expressed FN2602-S Chr4 29206001 29478000 0 0 Deletion 271999 LOC_Os04g49210 naringenin,2-oxoglutarate 3-dioxygenase, putative, expressed FN2602-S Chr4 29206001 29478000 0 0 Deletion 271999 LOC_Os04g49220 mitochondrial import inner membrane translocase subunit Tim, putative, expressed FN2602-S Chr4 29206001 29478000 0 0 Deletion 271999 LOC_Os04g49230 B3 DNA binding domain containing protein, expressed FN2602-S Chr4 29206001 29478000 0 0 Deletion 271999 LOC_Os04g49240 expressed protein FN2602-S Chr4 29206001 29478000 0 0 Deletion 271999 LOC_Os04g49250 UDP-glucose/GDP-mannose dehydrogenase family, central domain containing protein, expressed FN2602-S Chr4 29206001 29478000 0 0 Deletion 271999 LOC_Os04g49260 heavy metal-associated domain containing protein, expressed FN2602-S Chr4 29206001 29478000 0 0 Deletion 271999 LOC_Os04g49270 tRNA-splicing endonuclease positive effector-related, putative, expressed FN2602-S Chr4 29206001 29478000 0 0 Deletion 271999 LOC_Os04g49280 retrotransposon protein, putative, unclassified, expressed FN2602-S Chr4 29206001 29478000 0 0 Deletion 271999 LOC_Os04g49290 retrotransposon protein, putative, unclassified, expressed FN2602-S Chr4 29206001 29478000 0 0 Deletion 271999 LOC_Os04g49300 retrotransposon protein, putative, LINE subclass, expressed FN2602-S Chr4 29206001 29478000 0 0 Deletion 271999 LOC_Os04g49310 tRNA-splicing endonuclease positive effector-related, putative, expressed FN2602-S Chr4 29206001 29478000 0 0 Deletion 271999 LOC_Os04g49320 tRNA-splicing endonuclease positive effector-related, putative, expressed FN2602-S Chr4 29206001 29478000 0 0 Deletion 271999 LOC_Os04g49340 tRNA-splicing endonuclease positive effector-related, putative, expressed FN2602-S Chr4 29206001 29478000 0 0 Deletion 271999 LOC_Os04g49350 PPR repeat domain containing protein, putative, expressed FN2602-S Chr4 29206001 29478000 0 0 Deletion 271999 LOC_Os04g49360 OsFBX149 - F-box domain containing protein, expressed FN2602-S Chr4 29206001 29478000 0 0 Deletion 271999 LOC_Os04g49370 expressed protein FN2602-S Chr4 29206001 29478000 0 0 Deletion 271999 LOC_Os04g49380 transposon protein, putative, unclassified, expressed FN2602-S Chr4 33843606 A-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g56740 IQ calmodulin-binding motif family protein, putative, expressed FN2602-S Chr4 33843607 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g56740 IQ calmodulin-binding motif family protein, putative, expressed FN2602-S Chr4 34717669 G-T 0 0 Single Base Substitution 0 HET FN2602-S Chr4 34717670 A-T 0 0 Single Base Substitution 0 HET FN2602-S Chr5 14050171 A-G 0 0 Single Base Substitution 0 Homo FN2602-S Chr5 15416507 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os05g26530 retrotransposon protein, putative, Ty3-gypsy subclass FN2602-S Chr5 25479001 25488000 0 0 Deletion 8999 LOC_Os05g43830 hydrolase, alpha/beta fold family domain containing protein, expressed FN2602-S Chr5 29447699 T-A 0 0 Single Base Substitution 0 HET FN2602-S Chr5 8742629 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g15470 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2602-S Chr6 19909458 G-A 0 0 Single Base Substitution 0 HET FN2602-S Chr6 25474066 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os06g42380 retrotransposon protein, putative, unclassified, expressed FN2602-S Chr6 27692986 A-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os06g45750 retrotransposon protein, putative, unclassified, expressed FN2602-S Chr6 28972389 G-C 0 0 Single Base Substitution 0 Homo FN2602-S Chr7 10656507 Chr3 19428718 0 Translocation 0 FN2602-S Chr7 12585262 12585263 0 0 Insertion 1 HET FN2602-S Chr7 14253601 G-T 0 0 Single Base Substitution 0 HET FN2602-S Chr7 21775252 C-T 0 0 Single Base Substitution 0 HET FN2602-S Chr7 2833344 T-C 0 0 Single Base Substitution 0 HET FN2602-S Chr8 11651311 C-T 0 0 Single Base Substitution 0 HET FN2602-S Chr8 12162837 G-A 0 0 Single Base Substitution 0 HET FN2602-S Chr8 13136647 C-G 0 0 Single Base Substitution 0 HET FN2602-S Chr8 15893453 T-G 0 0 Single Base Substitution 0 HET FN2602-S Chr8 16129450 G-A 0 0 Single Base Substitution 0 HET FN2602-S Chr8 18373278 C-T 0 0 Single Base Substitution 0 HET FN2602-S Chr8 19247494 G-A 0 0 Single Base Substitution 0 HET FN2602-S Chr8 20827017 20827025 0 0 Deletion 8 Homo FN2602-S Chr8 23075351 G-C 0 0 Single Base Substitution 0 Homo FN2602-S Chr9 19503706 19503715 0 0 Deletion 9 Homo FN2602-S Chr9 19869502 Chr5 25487879 0 Translocation 0 FN2602-S Chr9 19869506 Chr5 25489080 0 Translocation 0 FN2602-S Chr9 21260004 Chr8 24138969 0 Translocation 0 FN2602-S Chr9 990332 A-T 0 0 Single Base Substitution 0 HET