FN2617-S Chr1 13675694 C-T 0 0 Single Base Substitution 0 HET FN2617-S Chr1 14002046 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g24860 retrotransposon protein, putative, unclassified, expressed FN2617-S Chr1 16204001 16411000 0 0 Deletion 206999 LOC_Os01g28920 retrotransposon, putative, centromere-specific, expressed FN2617-S Chr1 16204001 16411000 0 0 Deletion 206999 LOC_Os01g28930 expressed protein FN2617-S Chr1 16204001 16411000 0 0 Deletion 206999 LOC_Os01g28940 hypothetical protein FN2617-S Chr1 16204001 16411000 0 0 Deletion 206999 LOC_Os01g28950 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2617-S Chr1 16204001 16411000 0 0 Deletion 206999 LOC_Os01g28960 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2617-S Chr1 16204001 16411000 0 0 Deletion 206999 LOC_Os01g28970 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2617-S Chr1 16204001 16411000 0 0 Deletion 206999 LOC_Os01g28980 proton-dependent oligopeptide transport, putative, expressed FN2617-S Chr1 16204001 16411000 0 0 Deletion 206999 LOC_Os01g28989 expressed protein FN2617-S Chr1 16204001 16411000 0 0 Deletion 206999 LOC_Os01g29000 retrotransposon, putative, centromere-specific, expressed FN2617-S Chr1 16204001 16411000 0 0 Deletion 206999 LOC_Os01g29020 retrotransposon, putative, centromere-specific, expressed FN2617-S Chr1 16204001 16411000 0 0 Deletion 206999 LOC_Os01g29030 retrotransposon protein, putative, unclassified, expressed FN2617-S Chr1 16204001 16411000 0 0 Deletion 206999 LOC_Os01g29040 retrotransposon protein, putative, unclassified, expressed FN2617-S Chr1 16204001 16411000 0 0 Deletion 206999 LOC_Os01g29050 retrotransposon protein, putative, unclassified, expressed FN2617-S Chr1 16204001 16411000 0 0 Deletion 206999 LOC_Os01g29060 transposon protein, putative, unclassified FN2617-S Chr1 16204001 16411000 0 0 Deletion 206999 LOC_Os01g29070 retrotransposon protein, putative, unclassified FN2617-S Chr1 16204001 16411000 0 0 Deletion 206999 LOC_Os01g29080 retrotransposon protein, putative, unclassified, expressed FN2617-S Chr1 16204001 16411000 0 0 Deletion 206999 LOC_Os01g29090 retrotransposon protein, putative, unclassified FN2617-S Chr1 16204001 16411000 0 0 Deletion 206999 LOC_Os01g29100 retrotransposon protein, putative, unclassified, expressed FN2617-S Chr1 16204001 16411000 0 0 Deletion 206999 LOC_Os01g29104 expressed protein FN2617-S Chr1 16204001 16411000 0 0 Deletion 206999 LOC_Os01g29110 retrotransposon protein, putative, unclassified, expressed FN2617-S Chr1 16204001 16411000 0 0 Deletion 206999 LOC_Os01g29120 retrotransposon, putative, centromere-specific FN2617-S Chr1 16204001 16411000 0 0 Deletion 206999 LOC_Os01g29130 retrotransposon, putative, centromere-specific FN2617-S Chr1 16204001 16411000 0 0 Deletion 206999 LOC_Os01g29140 retrotransposon protein, putative, unclassified, expressed FN2617-S Chr1 16204001 16411000 0 0 Deletion 206999 LOC_Os01g29150 cytochrome P450 72A1, putative, expressed FN2617-S Chr1 16204001 16411000 0 0 Deletion 206999 LOC_Os01g29160 retrotransposon protein, putative, Ty1-copia subclass FN2617-S Chr1 16204001 16411000 0 0 Deletion 206999 LOC_Os01g29170 retrotransposon protein, putative, Ty1-copia subclass FN2617-S Chr1 16204001 16411000 0 0 Deletion 206999 LOC_Os01g29180 expressed protein FN2617-S Chr1 16204001 16411000 0 0 Deletion 206999 LOC_Os01g29190 retrotransposon protein, putative, unclassified, expressed FN2617-S Chr1 16204001 16411000 0 0 Deletion 206999 LOC_Os01g29200 transposon protein, putative, unclassified FN2617-S Chr1 16204001 16411000 0 0 Deletion 206999 LOC_Os01g29210 hypothetical protein FN2617-S Chr1 16204001 16411000 0 0 Deletion 206999 LOC_Os01g29220 expressed protein FN2617-S Chr1 16204001 16411000 0 0 Deletion 206999 LOC_Os01g29230 expressed protein FN2617-S Chr1 16204001 16411000 0 0 Deletion 206999 LOC_Os01g29240 expressed protein FN2617-S Chr1 16204001 16411000 0 0 Deletion 206999 LOC_Os01g29250 retrotransposon protein, putative, unclassified, expressed FN2617-S Chr1 16204001 16411000 0 0 Deletion 206999 LOC_Os01g29260 retrotransposon protein, putative, unclassified, expressed FN2617-S Chr1 16204001 16411000 0 0 Deletion 206999 LOC_Os01g29270 retrotransposon protein, putative, unclassified, expressed FN2617-S Chr1 1799105 1799111 0 0 Deletion 6 Homo FN2617-S Chr1 20318542 G-T 0 0 Single Base Substitution 0 HET FN2617-S Chr1 22323732 C-T 0 0 Single Base Substitution 0 HET FN2617-S Chr1 28017598 G-T 0 0 Single Base Substitution 0 Homo FN2617-S Chr1 28017600 C-G 0 0 Single Base Substitution 0 Homo FN2617-S Chr1 28043747 C-A 0 0 Single Base Substitution 0 HET FN2617-S Chr1 29806780 29806782 0 0 Insertion 2 HET FN2617-S Chr1 35409533 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g61180 exo70 exocyst complex subunit domain containing protein, expressed FN2617-S Chr1 5893430 T-A 0 0 Single Base Substitution 0 HET FN2617-S Chr10 15109063 T-A 0 0 Single Base Substitution 0 HET FN2617-S Chr10 15216983 G-A 0 0 Single Base Substitution 0 Homo FN2617-S Chr10 19874688 19874700 0 0 Insertion 12 HET FN2617-S Chr10 2998743 Chr1 37755075 0 Translocation 0 FN2617-S Chr11 25735633 Chr5 18398179 0 Translocation 0 LOC_Os05g31610 Leucine Rich Repeat family protein, expressed FN2617-S Chr11 25735633 Chr5 18398179 0 Translocation 0 LOC_Os11g42720 retrotransposon protein, putative, unclassified, expressed FN2617-S Chr11 28812048 C-T 0 0 Single Base Substitution 0 HET FN2617-S Chr11 28861697 28861699 0 0 Deletion 2 HET FN2617-S Chr12 19780626 T-C 0 0 Single Base Substitution 0 Homo FN2617-S Chr12 22898712 C-T 0 0 Single Base Substitution 0 HET FN2617-S Chr12 26806715 A-G 0 0 Single Base Substitution 0 Homo FN2617-S Chr12 962564 G-T 0 0 Single Base Substitution 0 HET FN2617-S Chr2 19807861 A-T 0 0 Single Base Substitution 0 HET FN2617-S Chr2 19955289 G-A 0 0 Single Base Substitution 0 HET FN2617-S Chr2 27547848 G-A 0 0 Single Base Substitution 0 Homo FN2617-S Chr2 33678963 33678965 0 0 Insertion 2 HET FN2617-S Chr2 33886803 T-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os02g55340 WD domain and HEAT domain containing protein, putative, expressed FN2617-S Chr2 35127931 G-A 0 0 Single Base Substitution 0 Homo FN2617-S Chr2 35128934 35128937 0 0 Deletion 3 Homo FN2617-S Chr2 6940195 C-T 0 0 Single Base Substitution 0 HET FN2617-S Chr3 10133556 T-A 0 0 Single Base Substitution 0 HET FN2617-S Chr3 10819573 T-A 0 0 Single Base Substitution 0 HET FN2617-S Chr3 19680090 G-T 0 0 Single Base Substitution 0 HET FN2617-S Chr3 19844818 A-T 0 0 Single Base Substitution 0 Homo FN2617-S Chr3 27452210 27452213 0 0 Deletion 3 Homo FN2617-S Chr3 31313195 T-C 0 0 Single Base Substitution 0 HET FN2617-S Chr3 33048907 C-A 0 0 Single Base Substitution 0 HET FN2617-S Chr3 6340677 6340678 0 0 Deletion 1 frameshift_variant HET LOC_Os03g12080 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2617-S Chr4 1695517 C-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g03790 retrotransposon protein, putative, unclassified, expressed FN2617-S Chr4 23330284 23330286 0 0 Insertion 2 HET FN2617-S Chr4 25678209 G-T 0 0 Single Base Substitution 0 HET FN2617-S Chr4 29014806 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g48660 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2617-S Chr4 2922332 G-A 0 0 Single Base Substitution 0 HET FN2617-S Chr4 7367624 T-A 0 0 Single Base Substitution 0 HET FN2617-S Chr4 7420905 C-T 0 0 Single Base Substitution 0 Homo FN2617-S Chr4 8673069 G-A 0 0 Single Base Substitution 0 HET FN2617-S Chr4 8846305 C-G 0 0 Single Base Substitution 0 HET FN2617-S Chr5 10351277 C-T 0 0 Single Base Substitution 0 HET FN2617-S Chr5 13700499 G-C 0 0 Single Base Substitution 0 HET FN2617-S Chr5 16823315 C-T 0 0 Single Base Substitution 0 HET FN2617-S Chr5 17711119 17711127 0 0 Deletion 8 HET FN2617-S Chr5 18097866 G-T 0 0 Single Base Substitution 0 STOP_GAINED HET LOC_Os05g31130 retrotransposon protein, putative, unclassified, expressed FN2617-S Chr5 27822397 G-A 0 0 Single Base Substitution 0 Homo FN2617-S Chr5 4697911 A-G 0 0 Single Base Substitution 0 HET FN2617-S Chr5 7753655 7753666 0 0 Deletion 11 HET FN2617-S Chr5 8555001 8575000 0 0 Deletion 19999 LOC_Os05g15070 ligA, putative, expressed FN2617-S Chr5 8555001 8575000 0 0 Deletion 19999 LOC_Os05g15080 expressed protein FN2617-S Chr5 8555001 8575000 0 0 Deletion 19999 LOC_Os05g15090 retrotransposon protein, putative, unclassified, expressed FN2617-S Chr5 8555001 8575000 0 0 Deletion 19999 LOC_Os05g15100 expressed protein FN2617-S Chr5 8555001 8575000 0 0 Deletion 19999 LOC_Os05g15110 expressed protein FN2617-S Chr6 19811502 19811506 0 0 Deletion 4 HET FN2617-S Chr6 21588246 G-T 0 0 Single Base Substitution 0 HET FN2617-S Chr6 31005202 C-G 0 0 Single Base Substitution 0 HET FN2617-S Chr6 31121274 A-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os06g51380 ROOT HAIRLESS 1, putative, expressed FN2617-S Chr7 10597908 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os07g17910 retrotransposon protein, putative, unclassified, expressed FN2617-S Chr7 10597909 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os07g17910 retrotransposon protein, putative, unclassified, expressed FN2617-S Chr7 14130306 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os07g24850 retrotransposon protein, putative, unclassified, expressed FN2617-S Chr7 24726197 A-G 0 0 Single Base Substitution 0 HET FN2617-S Chr7 25706475 C-A 0 0 Single Base Substitution 0 HET FN2617-S Chr7 28619369 G-T 0 0 Single Base Substitution 0 HET FN2617-S Chr7 9059155 9059161 0 0 Deletion 6 inframe_deletion HET LOC_Os07g15620 retrotransposon protein, putative, unclassified, expressed FN2617-S Chr8 10064508 10064509 0 0 Deletion 1 HET FN2617-S Chr8 14118255 A-G 0 0 Single Base Substitution 0 HET FN2617-S Chr8 4727035 G-A 0 0 Single Base Substitution 0 HET FN2617-S Chr9 11827579 C-T 0 0 Single Base Substitution 0 HET FN2617-S Chr9 11827580 C-T 0 0 Single Base Substitution 0 HET FN2617-S Chr9 11827584 G-T 0 0 Single Base Substitution 0 HET FN2617-S Chr9 12735973 T-C 0 0 Single Base Substitution 0 HET FN2617-S Chr9 17067828 C-T 0 0 Single Base Substitution 0 HET FN2617-S Chr9 5226653 5226655 0 0 Deletion 2 HET FN2617-S Chr9 9050696 G-A 0 0 Single Base Substitution 0 HET