FN2619-S Chr1 15018789 G-A 0 0 Single Base Substitution 0 HET FN2619-S Chr1 15840876 15840878 0 0 Deletion 2 Homo FN2619-S Chr1 22180356 22180358 0 0 Deletion 2 HET FN2619-S Chr1 25245398 25245400 0 0 Insertion 2 HET FN2619-S Chr1 31720782 T-C 0 0 Single Base Substitution 0 HET FN2619-S Chr1 34107346 T-A 0 0 Single Base Substitution 0 HET FN2619-S Chr1 34806914 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g60190 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, putative, expressed FN2619-S Chr1 5769797 A-G 0 0 Single Base Substitution 0 HET FN2619-S Chr1 5873385 5873386 0 0 Deletion 1 HET FN2619-S Chr10 11143353 T-G 0 0 Single Base Substitution 0 HET FN2619-S Chr10 12146492 G-A 0 0 Single Base Substitution 0 HET FN2619-S Chr10 12472747 C-G 0 0 Single Base Substitution 0 HET FN2619-S Chr10 13252405 G-A 0 0 Single Base Substitution 0 HET FN2619-S Chr10 1717945 G-A 0 0 Single Base Substitution 0 HET FN2619-S Chr10 17685308 T-C 0 0 Single Base Substitution 0 HET FN2619-S Chr10 2818631 T-A 0 0 Single Base Substitution 0 STOP_GAINED HET LOC_Os10g05650 transposon protein, putative, unclassified, expressed FN2619-S Chr10 9955392 C-T 0 0 Single Base Substitution 0 HET FN2619-S Chr11 14006698 G-A 0 0 Single Base Substitution 0 STOP_GAINED HET LOC_Os11g24540 signal peptide peptidase-like 2B, putative, expressed FN2619-S Chr11 15757305 G-T 0 0 Single Base Substitution 0 HET FN2619-S Chr11 20869145 C-A 0 0 Single Base Substitution 0 HET FN2619-S Chr11 26531962 T-C 0 0 Single Base Substitution 0 HET FN2619-S Chr11 26726590 T-A 0 0 Single Base Substitution 0 HET FN2619-S Chr11 431651 431652 0 0 Deletion 1 frameshift_variant HET LOC_Os11g01810 DNA methyltransferase protein, putative, expressed FN2619-S Chr11 8865131 G-A 0 0 Single Base Substitution 0 HET FN2619-S Chr11 9393831 A-G 0 0 Single Base Substitution 0 HET FN2619-S Chr12 1214741 1214750 0 0 Deletion 9 HET FN2619-S Chr12 1256757 1256765 0 0 Insertion 8 HET FN2619-S Chr12 15471806 15471808 0 0 Deletion 2 Homo FN2619-S Chr12 15661627 15661645 0 0 Deletion 18 HET FN2619-S Chr12 15797176 T-A 0 0 Single Base Substitution 0 STOP_GAINED HET LOC_Os12g26970 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2619-S Chr12 1774371 C-T 0 0 Single Base Substitution 0 HET FN2619-S Chr12 1775576 G-A 0 0 Single Base Substitution 0 HET FN2619-S Chr12 1775577 A-T 0 0 Single Base Substitution 0 HET FN2619-S Chr12 19400944 19400947 0 0 Insertion 3 HET FN2619-S Chr12 2036546 G-A 0 0 Single Base Substitution 0 HET FN2619-S Chr12 23018117 T-C 0 0 Single Base Substitution 0 HET FN2619-S Chr12 23737023 C-A 0 0 Single Base Substitution 0 HET FN2619-S Chr12 24607651 24607669 0 0 Deletion 18 HET FN2619-S Chr12 3426770 Chr3 10353052 0 Translocation 0 FN2619-S Chr12 3426770 Chr3 10353052 0 Translocation 0 LOC_Os03g18440 expressed protein FN2619-S Chr12 3426773 Chr3 10353496 0 Translocation 0 FN2619-S Chr12 3426773 Chr3 10353496 0 Translocation 0 LOC_Os03g18440 expressed protein FN2619-S Chr12 6943851 6943853 0 0 Deletion 2 Homo FN2619-S Chr12 8194512 8194514 0 0 Deletion 2 HET FN2619-S Chr12 8757700 A-G 0 0 Single Base Substitution 0 HET FN2619-S Chr2 10192932 C-T 0 0 Single Base Substitution 0 HET FN2619-S Chr2 15093540 T-A 0 0 Single Base Substitution 0 HET FN2619-S Chr2 20008792 20008793 0 0 Deletion 1 Homo FN2619-S Chr2 21719823 C-T 0 0 Single Base Substitution 0 HET FN2619-S Chr2 23801961 A-T 0 0 Single Base Substitution 0 HET FN2619-S Chr2 29200324 G-C 0 0 Single Base Substitution 0 HET FN2619-S Chr2 5504339 A-T 0 0 Single Base Substitution 0 Homo FN2619-S Chr2 8451105 G-T 0 0 Single Base Substitution 0 HET FN2619-S Chr3 10353511 Chr1 13002034 0 Translocation 0 LOC_Os01g23120 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2619-S Chr3 10353511 Chr1 13002034 0 Translocation 0 LOC_Os03g18440 expressed protein FN2619-S Chr3 10354685 Chr1 13002053 0 Translocation 0 LOC_Os01g23120 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2619-S Chr3 10354685 Chr1 13002053 0 Translocation 0 LOC_Os03g18440 expressed protein FN2619-S Chr3 12785364 G-A 0 0 Single Base Substitution 0 HET FN2619-S Chr3 17087486 17087488 0 0 Deletion 2 HET FN2619-S Chr3 17407070 17407080 0 0 Deletion 10 HET FN2619-S Chr3 17416003 A-G 0 0 Single Base Substitution 0 HET FN2619-S Chr3 18071965 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g31650 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2619-S Chr3 18104106 18104108 0 0 Insertion 2 HET FN2619-S Chr3 2237309 T-C 0 0 Single Base Substitution 0 HET FN2619-S Chr3 23063484 G-T 0 0 Single Base Substitution 0 HET FN2619-S Chr3 23181667 A-G 0 0 Single Base Substitution 0 HET FN2619-S Chr3 23637422 C-T 0 0 Single Base Substitution 0 HET FN2619-S Chr3 31578881 31578882 0 0 Deletion 1 HET FN2619-S Chr3 33733981 33734239 0 0 Inversion 0 LOC_Os03g59240 carboxyl-terminal peptidase, putative, expressed FN2619-S Chr3 34547122 G-A 0 0 Single Base Substitution 0 HET FN2619-S Chr3 8235756 A-G 0 0 Single Base Substitution 0 HET FN2619-S Chr4 12779148 G-A 0 0 Single Base Substitution 0 HET FN2619-S Chr4 14584033 C-G 0 0 Single Base Substitution 0 HET FN2619-S Chr4 20533481 20533496 0 0 Deletion 15 Homo FN2619-S Chr4 21411484 21411485 0 0 Deletion 1 HET FN2619-S Chr4 2156697 T-C 0 0 Single Base Substitution 0 HET FN2619-S Chr4 23249001 23262000 0 0 Deletion 12999 FN2619-S Chr4 25788153 A-G 0 0 Single Base Substitution 0 HET FN2619-S Chr4 35296810 A-T 0 0 Single Base Substitution 0 HET FN2619-S Chr4 35296811 T-C 0 0 Single Base Substitution 0 HET FN2619-S Chr4 4466001 4482000 0 0 Deletion 15999 LOC_Os04g08370 Leucine Rich Repeat family protein, expressed FN2619-S Chr4 4480387 G-A 0 0 Single Base Substitution 0 Homo FN2619-S Chr4 4480644 C-G 0 0 Single Base Substitution 0 Homo FN2619-S Chr5 16728461 16728462 0 0 Deletion 1 HET FN2619-S Chr5 20498080 C-A 0 0 Single Base Substitution 0 HET FN2619-S Chr5 26552172 26552173 0 0 Deletion 1 HET FN2619-S Chr5 26596864 Chr1 5903009 0 Translocation 0 LOC_Os01g11054 phosphoenolpyruvate carboxylase, putative, expressed FN2619-S Chr5 26596864 Chr1 5903009 0 Translocation 0 LOC_Os05g45900 endonuclease/exonuclease/phosphatase family domain containing protein, expressed FN2619-S Chr5 26596866 Chr1 5903008 0 Translocation 0 LOC_Os01g11054 phosphoenolpyruvate carboxylase, putative, expressed FN2619-S Chr5 26596866 Chr1 5903008 0 Translocation 0 LOC_Os05g45900 endonuclease/exonuclease/phosphatase family domain containing protein, expressed FN2619-S Chr5 29586516 T-C 0 0 Single Base Substitution 0 HET FN2619-S Chr5 6546503 6546520 0 0 Deletion 17 HET FN2619-S Chr5 8241047 8241072 0 0 Deletion 25 HET FN2619-S Chr5 8331933 8331934 0 0 Deletion 1 HET FN2619-S Chr6 12368989 A-G 0 0 Single Base Substitution 0 HET FN2619-S Chr6 12370988 G-T 0 0 Single Base Substitution 0 HET FN2619-S Chr6 14006184 C-A 0 0 Single Base Substitution 0 Homo FN2619-S Chr6 14006185 C-A 0 0 Single Base Substitution 0 Homo FN2619-S Chr6 14401638 14401647 0 0 Deletion 9 HET FN2619-S Chr6 15187006 G-A 0 0 Single Base Substitution 0 HET FN2619-S Chr6 1552401 A-T 0 0 Single Base Substitution 0 HET FN2619-S Chr6 17787494 C-A 0 0 Single Base Substitution 0 HET FN2619-S Chr6 19573502 19573503 0 0 Deletion 1 HET FN2619-S Chr6 19636449 19636450 0 0 Insertion 1 HET FN2619-S Chr6 21458149 T-C 0 0 Single Base Substitution 0 Homo FN2619-S Chr6 3054922 T-C 0 0 Single Base Substitution 0 HET FN2619-S Chr6 6706900 6706902 0 0 Insertion 2 HET FN2619-S Chr6 8592373 G-C 0 0 Single Base Substitution 0 HET FN2619-S Chr6 9885137 C-T 0 0 Single Base Substitution 0 HET FN2619-S Chr7 10833775 C-G 0 0 Single Base Substitution 0 Homo FN2619-S Chr7 14214787 A-T 0 0 Single Base Substitution 0 HET FN2619-S Chr7 14958757 C-T 0 0 Single Base Substitution 0 HET FN2619-S Chr7 1565413 G-T 0 0 Single Base Substitution 0 HET FN2619-S Chr7 18638429 A-G 0 0 Single Base Substitution 0 HET FN2619-S Chr7 18665638 G-A 0 0 Single Base Substitution 0 Homo FN2619-S Chr7 19792194 G-A 0 0 Single Base Substitution 0 Homo FN2619-S Chr7 21461453 A-T 0 0 Single Base Substitution 0 HET FN2619-S Chr7 25828854 C-T 0 0 Single Base Substitution 0 HET FN2619-S Chr7 28687858 T-C 0 0 Single Base Substitution 0 HET FN2619-S Chr7 5009087 G-T 0 0 Single Base Substitution 0 HET FN2619-S Chr7 7304384 G-A 0 0 Single Base Substitution 0 HET FN2619-S Chr8 10391923 G-A 0 0 Single Base Substitution 0 HET FN2619-S Chr8 10466478 C-A 0 0 Single Base Substitution 0 HET FN2619-S Chr8 1376943 C-A 0 0 Single Base Substitution 0 HET FN2619-S Chr8 15130582 15130586 0 0 Deletion 4 HET FN2619-S Chr8 15995045 A-T 0 0 Single Base Substitution 0 HET FN2619-S Chr8 16352759 A-G 0 0 Single Base Substitution 0 HET FN2619-S Chr8 16356286 16356296 0 0 Deletion 10 HET FN2619-S Chr8 16403930 16403950 0 0 Deletion 20 HET FN2619-S Chr8 23672936 C-T 0 0 Single Base Substitution 0 HET FN2619-S Chr8 26195161 C-A 0 0 Single Base Substitution 0 Homo FN2619-S Chr8 2721495 2721504 0 0 Deletion 9 disruptive_inframe_deletion HET LOC_Os08g05230 retrotransposon protein, putative, unclassified FN2619-S Chr8 28220565 G-A 0 0 Single Base Substitution 0 HET FN2619-S Chr8 3161529 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os08g05870 oxysterol-binding protein-related protein 6, putative, expressed FN2619-S Chr8 4413572 G-A 0 0 Single Base Substitution 0 HET FN2619-S Chr8 6052090 6052092 0 0 Insertion 2 HET FN2619-S Chr8 7737707 7737713 0 0 Deletion 6 HET FN2619-S Chr8 8199677 8199697 0 0 Deletion 20 frameshift_variant HET LOC_Os08g13750 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2619-S Chr9 1313402 G-T 0 0 Single Base Substitution 0 HET FN2619-S Chr9 21263545 21263549 0 0 Deletion 4 HET FN2619-S Chr9 3627095 3627096 0 0 Insertion 1 HET FN2619-S Chr9 5667001 5752000 0 0 Deletion 84999 LOC_Os09g10370 hypothetical protein FN2619-S Chr9 5667001 5752000 0 0 Deletion 84999 LOC_Os09g10380 transposon protein, putative, unclassified, expressed FN2619-S Chr9 5667001 5752000 0 0 Deletion 84999 LOC_Os09g10390 retrotransposon protein, putative, unclassified, expressed FN2619-S Chr9 5667001 5752000 0 0 Deletion 84999 LOC_Os09g10400 transposon protein, putative, unclassified, expressed FN2619-S Chr9 5667001 5752000 0 0 Deletion 84999 LOC_Os09g10410 retrotransposon protein, putative, unclassified, expressed FN2619-S Chr9 5667001 5752000 0 0 Deletion 84999 LOC_Os09g10420 retrotransposon protein, putative, unclassified, expressed FN2619-S Chr9 5667001 5752000 0 0 Deletion 84999 LOC_Os09g10430 retrotransposon protein, putative, unclassified, expressed FN2619-S Chr9 5667001 5752000 0 0 Deletion 84999 LOC_Os09g10440 retrotransposon protein, putative, Ty3-gypsy subclass FN2619-S Chr9 5667001 5752000 0 0 Deletion 84999 LOC_Os09g10450 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2619-S Chr9 5667001 5752000 0 0 Deletion 84999 LOC_Os09g10460 transposon protein, putative, unclassified FN2619-S Chr9 5667001 5752000 0 0 Deletion 84999 LOC_Os09g10470 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2619-S Chr9 5667001 5752000 0 0 Deletion 84999 LOC_Os09g10480 retrotransposon protein, putative, Ty3-gypsy subclass FN2619-S Chr9 5667001 5752000 0 0 Deletion 84999 LOC_Os09g10500 retrotransposon protein, putative, Ty3-gypsy subclass FN2619-S Chr9 5667001 5752000 0 0 Deletion 84999 LOC_Os09g10510 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2619-S Chr9 5667001 5752000 0 0 Deletion 84999 LOC_Os09g10520 hypothetical protein FN2619-S Chr9 5667001 5752000 0 0 Deletion 84999 LOC_Os09g10530 retrotransposon protein, putative, unclassified, expressed FN2619-S Chr9 5667001 5752000 0 0 Deletion 84999 LOC_Os09g10540 retrotransposon protein, putative, Ty3-gypsy subclass, expressed