FN2628-S Chr1 10098199 10098202 0 0 Deletion 3 HET FN2628-S Chr1 12439001 12646000 0 0 Deletion 206999 LOC_Os01g22140 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2628-S Chr1 12439001 12646000 0 0 Deletion 206999 LOC_Os01g22150 transposon protein, putative, CACTA, En/Spm sub-class FN2628-S Chr1 12439001 12646000 0 0 Deletion 206999 LOC_Os01g22170 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2628-S Chr1 12439001 12646000 0 0 Deletion 206999 LOC_Os01g22180 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2628-S Chr1 12439001 12646000 0 0 Deletion 206999 LOC_Os01g22190 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2628-S Chr1 12439001 12646000 0 0 Deletion 206999 LOC_Os01g22200 transposon protein, putative, CACTA, En/Spm sub-class FN2628-S Chr1 12439001 12646000 0 0 Deletion 206999 LOC_Os01g22209 expressed protein FN2628-S Chr1 12439001 12646000 0 0 Deletion 206999 LOC_Os01g22220 expressed protein FN2628-S Chr1 12439001 12646000 0 0 Deletion 206999 LOC_Os01g22230 peroxidase precursor, putative, expressed FN2628-S Chr1 12439001 12646000 0 0 Deletion 206999 LOC_Os01g22249 peroxidase precursor, putative, expressed FN2628-S Chr1 12439001 12646000 0 0 Deletion 206999 LOC_Os01g22270 retrotransposon protein, putative, unclassified, expressed FN2628-S Chr1 12439001 12646000 0 0 Deletion 206999 LOC_Os01g22280 retrotransposon protein, putative, unclassified, expressed FN2628-S Chr1 12439001 12646000 0 0 Deletion 206999 LOC_Os01g22300 retrotransposon protein, putative, Ty3-gypsy subclass FN2628-S Chr1 12439001 12646000 0 0 Deletion 206999 LOC_Os01g22309 hypothetical protein FN2628-S Chr1 12439001 12646000 0 0 Deletion 206999 LOC_Os01g22320 transposon protein, putative, unclassified FN2628-S Chr1 12439001 12646000 0 0 Deletion 206999 LOC_Os01g22336 peroxidase precursor, putative, expressed FN2628-S Chr1 12439001 12646000 0 0 Deletion 206999 LOC_Os01g22352 peroxidase precursor, putative, expressed FN2628-S Chr1 12439001 12646000 0 0 Deletion 206999 LOC_Os01g22370 peroxidase precursor, putative, expressed FN2628-S Chr1 12439001 12646000 0 0 Deletion 206999 LOC_Os01g22380 expressed protein FN2628-S Chr1 12439001 12646000 0 0 Deletion 206999 LOC_Os01g22390 WD domain containing protein, putative, expressed FN2628-S Chr1 12439001 12646000 0 0 Deletion 206999 LOC_Os01g22410 transposon protein, putative, unclassified, expressed FN2628-S Chr1 12439001 12646000 0 0 Deletion 206999 LOC_Os01g22420 transposon protein, putative, unclassified, expressed FN2628-S Chr1 12439001 12646000 0 0 Deletion 206999 LOC_Os01g22430 OsFBDUF3 - F-box and DUF domain containing protein, expressed FN2628-S Chr1 12439001 12646000 0 0 Deletion 206999 LOC_Os01g22440 expressed protein FN2628-S Chr1 12439001 12646000 0 0 Deletion 206999 LOC_Os01g22450 expressed protein FN2628-S Chr1 12439001 12646000 0 0 Deletion 206999 LOC_Os01g22480 OsFBDUF4 - F-box and DUF domain containing protein, expressed FN2628-S Chr1 12439001 12646000 0 0 Deletion 206999 LOC_Os01g22490 40S ribosomal protein S27a, putative, expressed FN2628-S Chr1 13942293 A-C 0 0 Single Base Substitution 0 HET FN2628-S Chr1 28308352 28308354 0 0 Deletion 2 frameshift_variant Homo LOC_Os01g49240 limonoid UDP-glucosyltransferase, putative, expressed FN2628-S Chr1 28792562 G-A 0 0 Single Base Substitution 0 HET FN2628-S Chr1 35035999 35036000 0 0 Deletion 1 Homo FN2628-S Chr1 39337924 A-C 0 0 Single Base Substitution 0 STOP_GAINED Homo LOC_Os01g67690 retrotransposon protein, putative, Ty1-copia subclass, expressed FN2628-S Chr1 41526416 T-C 0 0 Single Base Substitution 0 HET FN2628-S Chr11 1631826 1631830 0 0 Deletion 4 HET FN2628-S Chr11 20804001 20817000 0 0 Deletion 12999 LOC_Os11g35500 receptor-like protein kinase 5 precursor, putative, expressed FN2628-S Chr11 20804001 20817000 0 0 Deletion 12999 LOC_Os11g35510 retrotransposon protein, putative, unclassified FN2628-S Chr11 261001 428000 0 0 Deletion 166999 LOC_Os11g01439 chloroplast unusual positioning protein, putative, expressed FN2628-S Chr11 261001 428000 0 0 Deletion 166999 LOC_Os11g01450 phosphatidate cytidylyltransferase, putative, expressed FN2628-S Chr11 261001 428000 0 0 Deletion 166999 LOC_Os11g01460 expressed protein FN2628-S Chr11 261001 428000 0 0 Deletion 166999 LOC_Os11g01470 retrotransposon protein, putative, unclassified, expressed FN2628-S Chr11 261001 428000 0 0 Deletion 166999 LOC_Os11g01480 MYB family transcription factor, putative, expressed FN2628-S Chr11 261001 428000 0 0 Deletion 166999 LOC_Os11g01490 outer membrane protein, OMP85 family, putative, expressed FN2628-S Chr11 261001 428000 0 0 Deletion 166999 LOC_Os11g01510 ubiquitin-activating enzyme, putative, expressed FN2628-S Chr11 261001 428000 0 0 Deletion 166999 LOC_Os11g01520 expressed protein FN2628-S Chr11 261001 428000 0 0 Deletion 166999 LOC_Os11g01530 ferritin-1, chloroplast precursor, putative, expressed FN2628-S Chr11 261001 428000 0 0 Deletion 166999 LOC_Os11g01540 expressed protein FN2628-S Chr11 261001 428000 0 0 Deletion 166999 LOC_Os11g01550 DUF260 domain containing protein, putative, expressed FN2628-S Chr11 261001 428000 0 0 Deletion 166999 LOC_Os11g01570 PMR5, putative, expressed FN2628-S Chr11 261001 428000 0 0 Deletion 166999 LOC_Os11g01580 sodium/calcium exchanger protein, putative, expressed FN2628-S Chr11 261001 428000 0 0 Deletion 166999 LOC_Os11g01590 nodulin, putative, expressed FN2628-S Chr11 261001 428000 0 0 Deletion 166999 LOC_Os11g01594 expressed protein FN2628-S Chr11 261001 428000 0 0 Deletion 166999 LOC_Os11g01600 macrophage migration inhibitory factor, putative, expressed FN2628-S Chr11 261001 428000 0 0 Deletion 166999 LOC_Os11g01610 prenylated rab acceptor, putative, expressed FN2628-S Chr11 261001 428000 0 0 Deletion 166999 LOC_Os11g01620 inactive receptor kinase At2g26730 precursor, putative, expressed FN2628-S Chr11 261001 428000 0 0 Deletion 166999 LOC_Os11g01630 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2628-S Chr11 261001 428000 0 0 Deletion 166999 LOC_Os11g01660 expressed protein FN2628-S Chr11 261001 428000 0 0 Deletion 166999 LOC_Os11g01670 expressed protein FN2628-S Chr11 261001 428000 0 0 Deletion 166999 LOC_Os11g01690 expressed protein FN2628-S Chr11 261001 428000 0 0 Deletion 166999 LOC_Os11g01700 retrotransposon protein, putative, Ty1-copia subclass, expressed FN2628-S Chr11 261001 428000 0 0 Deletion 166999 LOC_Os11g01710 retrotransposon protein, putative, Ty1-copia subclass FN2628-S Chr11 261001 428000 0 0 Deletion 166999 LOC_Os11g01720 expressed protein FN2628-S Chr11 261001 428000 0 0 Deletion 166999 LOC_Os11g01730 laccase-23 precursor, putative, expressed FN2628-S Chr11 261001 428000 0 0 Deletion 166999 LOC_Os11g01740 serine/threonine-protein kinase, putative, expressed FN2628-S Chr11 261001 428000 0 0 Deletion 166999 LOC_Os11g01750 expressed protein FN2628-S Chr11 261001 428000 0 0 Deletion 166999 LOC_Os11g01760 expressed protein FN2628-S Chr11 261001 428000 0 0 Deletion 166999 LOC_Os11g01770 hypothetical protein FN2628-S Chr11 261001 428000 0 0 Deletion 166999 LOC_Os11g01780 F-box/LRR-repeat protein 3, putative, expressed FN2628-S Chr11 261001 428000 0 0 Deletion 166999 LOC_Os11g01790 protein phosphatase 2c, putative, expressed FN2628-S Chr11 261001 428000 0 0 Deletion 166999 LOC_Os11g01800 expressed protein FN2628-S Chr11 26972550 Chr1 35452941 0 Translocation 0 LOC_Os01g61270 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2628-S Chr11 26972550 Chr1 35452941 0 Translocation 0 LOC_Os11g44600 calmodulin binding protein, putative, expressed FN2628-S Chr12 23864662 T-A 0 0 Single Base Substitution 0 HET FN2628-S Chr12 6749843 Chr9 20542177 0 Translocation 0 FN2628-S Chr12 6749843 Chr9 20542177 0 Translocation 0 LOC_Os09g35720 generative cell specific-1, putative, expressed FN2628-S Chr12 6756199 Chr3 4676764 0 Translocation 0 LOC_Os12g12290 exostosin family domain containing protein, expressed FN2628-S Chr12 8249689 8249691 0 0 Deletion 2 HET FN2628-S Chr2 11692986 G-C 0 0 Single Base Substitution 0 HET FN2628-S Chr2 17223595 T-A 0 0 Single Base Substitution 0 HET FN2628-S Chr2 25965227 C-T 0 0 Single Base Substitution 0 HET FN2628-S Chr2 3948092 C-T 0 0 Single Base Substitution 0 HET FN2628-S Chr2 4831052 T-A 0 0 Single Base Substitution 0 Homo FN2628-S Chr3 13606383 13606384 0 0 Deletion 1 Homo FN2628-S Chr3 20002821 C-T 0 0 Single Base Substitution 0 HET FN2628-S Chr3 21697604 21697612 0 0 Deletion 8 HET FN2628-S Chr3 22723610 A-C 0 0 Single Base Substitution 0 HET FN2628-S Chr3 24696199 C-T 0 0 Single Base Substitution 0 HET FN2628-S Chr3 29195044 C-G 0 0 Single Base Substitution 0 HET FN2628-S Chr3 34949871 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g61660 retrotransposon protein, putative, unclassified, expressed FN2628-S Chr3 6225314 T-G 0 0 Single Base Substitution 0 Homo FN2628-S Chr4 15324068 T-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g26290 retrotransposon protein, putative, unclassified, expressed FN2628-S Chr4 6485519 G-T 0 0 Single Base Substitution 0 HET FN2628-S Chr4 9280385 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g16950 retrotransposon protein, putative, unclassified, expressed FN2628-S Chr5 13454900 A-G 0 0 Single Base Substitution 0 Homo FN2628-S Chr5 9230924 C-A 0 0 Single Base Substitution 0 HET FN2628-S Chr6 15198562 G-A 0 0 Single Base Substitution 0 HET FN2628-S Chr6 17222179 A-T 0 0 Single Base Substitution 0 HET FN2628-S Chr6 17240615 C-T 0 0 Single Base Substitution 0 HET FN2628-S Chr6 19500464 A-G 0 0 Single Base Substitution 0 HET FN2628-S Chr6 3959048 3959050 0 0 Deletion 2 HET FN2628-S Chr6 8010782 G-C 0 0 Single Base Substitution 0 HET FN2628-S Chr6 8968468 8968472 0 0 Deletion 4 HET FN2628-S Chr7 1210697 A-G 0 0 Single Base Substitution 0 HET FN2628-S Chr7 14816250 14816288 0 0 Insertion 38 HET FN2628-S Chr7 20044143 20044165 0 0 Deletion 22 Homo FN2628-S Chr7 23826436 23826453 0 0 Deletion 17 HET FN2628-S Chr7 29095606 29095610 0 0 Deletion 4 Homo FN2628-S Chr7 5684305 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os07g10530 carboxyl-terminal peptidase, putative, expressed FN2628-S Chr7 7658135 A-G 0 0 Single Base Substitution 0 Homo FN2628-S Chr7 8716231 A-G 0 0 Single Base Substitution 0 Homo FN2628-S Chr8 16241014 16241016 0 0 Insertion 2 HET FN2628-S Chr8 21369574 G-A 0 0 Single Base Substitution 0 HET FN2628-S Chr8 28014143 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os08g44560 expressed protein FN2628-S Chr9 14382993 T-A 0 0 Single Base Substitution 0 HET FN2628-S Chr9 19501745 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os09g32680 cyclin, putative, expressed FN2628-S Chr9 20541719 Chr3 4676765 0 Translocation 0 FN2628-S Chr9 614001 661000 0 0 Deletion 46999 LOC_Os09g01930 expressed protein FN2628-S Chr9 614001 661000 0 0 Deletion 46999 LOC_Os09g01940 expressed protein FN2628-S Chr9 614001 661000 0 0 Deletion 46999 LOC_Os09g01950 expressed protein FN2628-S Chr9 614001 661000 0 0 Deletion 46999 LOC_Os09g01960 MYB family transcription factor, putative, expressed FN2628-S Chr9 618996 Chr1 8782007 0 Translocation 0 FN2628-S Chr9 659676 Chr1 8781750 0 Translocation 0 FN2628-S Chr9 8390031 C-T 0 0 Single Base Substitution 0 HET