FN2630-S Chr1 10755001 10780000 0 0 Deletion 24999 LOC_Os01g19030 retrotransposon protein, putative, unclassified, expressed FN2630-S Chr1 10755001 10780000 0 0 Deletion 24999 LOC_Os01g19050 transposon protein, putative, unclassified, expressed FN2630-S Chr1 10755001 10780000 0 0 Deletion 24999 LOC_Os01g19060 transposon protein, putative, CACTA, En/Spm sub-class FN2630-S Chr1 10875831 10875836 0 0 Deletion 5 frameshift_variant HET LOC_Os01g19230 expressed protein FN2630-S Chr1 12514677 G-C 0 0 Single Base Substitution 0 HET FN2630-S Chr1 22105790 A-T 0 0 Single Base Substitution 0 HET FN2630-S Chr1 26203968 C-A 0 0 Single Base Substitution 0 HET FN2630-S Chr1 30107838 A-G 0 0 Single Base Substitution 0 HET FN2630-S Chr1 34853614 34853616 0 0 Deletion 2 Homo FN2630-S Chr1 40220298 A-G 0 0 Single Base Substitution 0 HET FN2630-S Chr1 4022291 A-G 0 0 Single Base Substitution 0 HET FN2630-S Chr1 40431009 40431011 0 0 Deletion 2 HET FN2630-S Chr1 623728 C-T 0 0 Single Base Substitution 0 HET FN2630-S Chr1 647936 C-T 0 0 Single Base Substitution 0 HET FN2630-S Chr10 11988911 A-G 0 0 Single Base Substitution 0 HET FN2630-S Chr10 12390851 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os10g24190 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2630-S Chr10 14311684 G-T 0 0 Single Base Substitution 0 HET FN2630-S Chr10 4825522 G-A 0 0 Single Base Substitution 0 Homo FN2630-S Chr10 9798698 G-A 0 0 Single Base Substitution 0 HET FN2630-S Chr11 10763969 C-T 0 0 Single Base Substitution 0 Homo FN2630-S Chr11 16398310 16398318 0 0 Deletion 8 Homo FN2630-S Chr11 16669842 Chr7 28487475 0 Translocation 0 FN2630-S Chr11 17163887 G-T 0 0 Single Base Substitution 0 HET FN2630-S Chr11 18635819 G-A 0 0 Single Base Substitution 0 HET FN2630-S Chr11 18681519 Chr6 7481285 0 Translocation 0 FN2630-S Chr11 18681519 Chr6 7481285 0 Translocation 0 LOC_Os06g13560 SAM dependent carboxyl methyltransferase, putative, expressed FN2630-S Chr11 25401683 C-A 0 0 Single Base Substitution 0 HET FN2630-S Chr11 25734078 G-A 0 0 Single Base Substitution 0 HET FN2630-S Chr11 3802699 A-G 0 0 Single Base Substitution 0 HET FN2630-S Chr11 9824747 C-T 0 0 Single Base Substitution 0 Homo FN2630-S Chr12 13977069 G-A 0 0 Single Base Substitution 0 HET FN2630-S Chr12 14516546 T-A 0 0 Single Base Substitution 0 HET FN2630-S Chr12 18428022 C-T 0 0 Single Base Substitution 0 HET FN2630-S Chr12 26722973 A-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g43020 retrotransposon protein, putative, unclassified, expressed FN2630-S Chr12 4252596 G-T 0 0 Single Base Substitution 0 HET FN2630-S Chr12 4655599 4655605 0 0 Deletion 6 HET FN2630-S Chr12 4876396 C-A 0 0 Single Base Substitution 0 HET FN2630-S Chr12 7268966 A-T 0 0 Single Base Substitution 0 HET FN2630-S Chr12 7268967 A-T 0 0 Single Base Substitution 0 HET FN2630-S Chr12 9227743 C-T 0 0 Single Base Substitution 0 HET FN2630-S Chr2 32383759 G-A 0 0 Single Base Substitution 0 HET FN2630-S Chr2 3320710 A-G 0 0 Single Base Substitution 0 HET FN2630-S Chr2 3531828 C-T 0 0 Single Base Substitution 0 Homo FN2630-S Chr2 4555648 C-T 0 0 Single Base Substitution 0 HET FN2630-S Chr2 4555649 T-C 0 0 Single Base Substitution 0 HET FN2630-S Chr2 609354 T-A 0 0 Single Base Substitution 0 HET FN2630-S Chr3 21353122 C-T 0 0 Single Base Substitution 0 HET FN2630-S Chr3 23057588 C-T 0 0 Single Base Substitution 0 HET FN2630-S Chr3 30030650 30030652 0 0 Insertion 2 HET FN2630-S Chr3 3352594 C-T 0 0 Single Base Substitution 0 HET FN2630-S Chr3 33865469 C-T 0 0 Single Base Substitution 0 HET FN2630-S Chr3 4031270 G-A 0 0 Single Base Substitution 0 HET FN2630-S Chr3 4137504 T-C 0 0 Single Base Substitution 0 HET FN2630-S Chr4 14748003 14748005 0 0 Insertion 2 HET FN2630-S Chr4 15399843 G-A 0 0 Single Base Substitution 0 HET FN2630-S Chr4 19627165 G-T 0 0 Single Base Substitution 0 HET FN2630-S Chr4 2382276 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g04940 retrotransposon protein, putative, unclassified, expressed FN2630-S Chr4 24425535 C-T 0 0 Single Base Substitution 0 HET FN2630-S Chr4 31659484 C-T 0 0 Single Base Substitution 0 HET FN2630-S Chr4 5796294 G-T 0 0 Single Base Substitution 0 HET FN2630-S Chr5 14023639 T-A 0 0 Single Base Substitution 0 Homo FN2630-S Chr5 15549114 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os05g26810 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2630-S Chr5 16056143 G-A 0 0 Single Base Substitution 0 Homo FN2630-S Chr5 22907612 G-C 0 0 Single Base Substitution 0 HET FN2630-S Chr5 23789206 23789208 0 0 Deletion 2 frameshift_variant Homo LOC_Os05g40510 expressed protein FN2630-S Chr5 26912145 A-T 0 0 Single Base Substitution 0 HET FN2630-S Chr5 2746310 C-T 0 0 Single Base Substitution 0 HET FN2630-S Chr5 5757973 G-A 0 0 Single Base Substitution 0 HET FN2630-S Chr5 6666754 T-C 0 0 Single Base Substitution 0 Homo FN2630-S Chr6 11674405 G-A 0 0 Single Base Substitution 0 HET FN2630-S Chr6 14042607 A-T 0 0 Single Base Substitution 0 HET FN2630-S Chr6 15776194 C-A 0 0 Single Base Substitution 0 SPLICE_SITE_ACCEPTOR HET LOC_Os06g27840 retrotransposon protein, putative, LINE subclass, expressed FN2630-S Chr6 20183198 T-C 0 0 Single Base Substitution 0 HET FN2630-S Chr6 29545933 T-A 0 0 Single Base Substitution 0 HET FN2630-S Chr6 29570307 G-A 0 0 Single Base Substitution 0 HET FN2630-S Chr6 6987249 7095975 0 0 Inversion 0 FN2630-S Chr6 6987249 7095975 0 0 Inversion 0 LOC_Os06g12960 expressed protein FN2630-S Chr6 6987254 7095995 0 0 Inversion 0 FN2630-S Chr6 6987254 7095995 0 0 Inversion 0 LOC_Os06g12960 expressed protein FN2630-S Chr6 7481226 Chr1 35363150 0 Translocation 0 LOC_Os01g61100 transposon protein, putative, unclassified, expressed FN2630-S Chr6 7481226 Chr1 35363150 0 Translocation 0 LOC_Os06g13560 SAM dependent carboxyl methyltransferase, putative, expressed FN2630-S Chr7 10664355 A-C 0 0 Single Base Substitution 0 HET FN2630-S Chr7 10938008 Chr2 12124881 0 Translocation 0 FN2630-S Chr7 18804413 G-A 0 0 Single Base Substitution 0 HET FN2630-S Chr7 226001 226002 0 0 Deletion 1 HET FN2630-S Chr7 25482312 A-T 0 0 Single Base Substitution 0 HET FN2630-S Chr7 26906545 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os07g45074 FAT domain-containing protein, putative, expressed FN2630-S Chr7 3142522 G-T 0 0 Single Base Substitution 0 HET FN2630-S Chr7 9417471 G-A 0 0 Single Base Substitution 0 HET FN2630-S Chr8 18553728 A-T 0 0 Single Base Substitution 0 HET FN2630-S Chr8 27117784 C-T 0 0 Single Base Substitution 0 HET FN2630-S Chr8 2717474 C-T 0 0 Single Base Substitution 0 HET FN2630-S Chr8 9496623 G-A 0 0 Single Base Substitution 0 HET FN2630-S Chr9 10161684 A-G 0 0 Single Base Substitution 0 HET FN2630-S Chr9 15329565 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os09g25550 pentatricopeptide, putative, expressed FN2630-S Chr9 16313343 G-A 0 0 Single Base Substitution 0 HET FN2630-S Chr9 20166261 A-G 0 0 Single Base Substitution 0 HET