FN2634-S Chr1 12688714 A-G 0 0 Single Base Substitution 0 HET FN2634-S Chr1 13912172 13912177 0 0 Deletion 5 frameshift_variant Homo LOC_Os01g24720 expressed protein FN2634-S Chr1 18030882 18030883 0 0 Deletion 1 HET FN2634-S Chr1 18681679 C-T 0 0 Single Base Substitution 0 HET FN2634-S Chr1 20856251 20856261 0 0 Deletion 10 frameshift_variant HET LOC_Os01g37350 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2634-S Chr1 23044949 A-T 0 0 Single Base Substitution 0 HET FN2634-S Chr1 27545022 27545024 0 0 Deletion 2 HET FN2634-S Chr1 31172976 31172980 0 0 Deletion 4 HET FN2634-S Chr1 31827362 31827364 0 0 Deletion 2 HET FN2634-S Chr1 33419961 33486725 0 0 Inversion 0 LOC_Os01g57780 retrotransposon protein, putative, unclassified, expressed FN2634-S Chr1 33419961 33486725 0 0 Inversion 0 LOC_Os01g57920 OsFBL3 - F-box domain and LRR containing protein, expressed FN2634-S Chr1 33419966 33486726 0 0 Inversion 0 LOC_Os01g57780 retrotransposon protein, putative, unclassified, expressed FN2634-S Chr1 33419966 33486726 0 0 Inversion 0 LOC_Os01g57920 OsFBL3 - F-box domain and LRR containing protein, expressed FN2634-S Chr1 40059498 40059500 0 0 Deletion 2 HET FN2634-S Chr1 6418307 G-A 0 0 Single Base Substitution 0 Homo FN2634-S Chr10 18497224 A-G 0 0 Single Base Substitution 0 HET FN2634-S Chr10 19828778 G-A 0 0 Single Base Substitution 0 HET FN2634-S Chr10 19964307 T-C 0 0 Single Base Substitution 0 HET FN2634-S Chr10 4274820 4274830 0 0 Deletion 10 Homo FN2634-S Chr10 4715001 4744000 0 0 Deletion 28999 LOC_Os10g08696 retrotransposon protein, putative, Ty3-gypsy subclass FN2634-S Chr10 4715001 4744000 0 0 Deletion 28999 LOC_Os10g08702 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2634-S Chr10 4715001 4744000 0 0 Deletion 28999 LOC_Os10g08710 chalcone synthase, putative, expressed FN2634-S Chr10 4715001 4744000 0 0 Deletion 28999 LOC_Os10g08720 hypothetical protein FN2634-S Chr10 4715001 4744000 0 0 Deletion 28999 LOC_Os10g08730 expressed protein FN2634-S Chr10 4715001 4744000 0 0 Deletion 28999 LOC_Os10g08740 retrotransposon protein, putative, Ty1-copia subclass, expressed FN2634-S Chr10 4715001 4744000 0 0 Deletion 28999 LOC_Os10g08750 expressed protein FN2634-S Chr10 4742412 Chr8 7313341 0 Translocation 0 FN2634-S Chr10 4742412 Chr8 7313341 0 Translocation 0 LOC_Os08g12390 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2634-S Chr10 4742503 Chr5 29003293 0 Translocation 0 FN2634-S Chr10 4744045 Chr8 7313332 0 Translocation 0 LOC_Os08g12390 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2634-S Chr10 4744045 Chr8 7313332 0 Translocation 0 LOC_Os10g08750 expressed protein FN2634-S Chr10 8282989 8282991 0 0 Insertion 2 HET FN2634-S Chr11 24880397 C-A 0 0 Single Base Substitution 0 HET FN2634-S Chr11 24881036 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os11g41480 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2634-S Chr11 5733925 Chr1 10234167 0 Translocation 0 FN2634-S Chr11 7897062 7897063 0 0 Insertion 1 HET FN2634-S Chr12 1239570 A-G 0 0 Single Base Substitution 0 HET FN2634-S Chr2 12051526 G-A 0 0 Single Base Substitution 0 Homo FN2634-S Chr2 15122800 G-A 0 0 Single Base Substitution 0 Homo FN2634-S Chr2 20141433 20141434 0 0 Deletion 1 Homo FN2634-S Chr2 20244958 G-T 0 0 Single Base Substitution 0 HET FN2634-S Chr2 22577222 T-C 0 0 Single Base Substitution 0 HET FN2634-S Chr2 22816256 G-A 0 0 Single Base Substitution 0 HET FN2634-S Chr2 27323546 27323551 0 0 Deletion 5 HET FN2634-S Chr2 29507836 C-T 0 0 Single Base Substitution 0 HET FN2634-S Chr2 34406961 C-T 0 0 Single Base Substitution 0 HET FN2634-S Chr2 3815001 3847000 0 0 Deletion 31999 LOC_Os02g07380 retrotransposon protein, putative, unclassified, expressed FN2634-S Chr2 3815001 3847000 0 0 Deletion 31999 LOC_Os02g07390 retrotransposon, putative, centromere-specific, expressed FN2634-S Chr2 3815001 3847000 0 0 Deletion 31999 LOC_Os02g07400 retrotransposon protein, putative, unclassified, expressed FN2634-S Chr2 3815001 3847000 0 0 Deletion 31999 LOC_Os02g07410 glycine cleavage system H protein, putative, expressed FN2634-S Chr2 3815001 3847000 0 0 Deletion 31999 LOC_Os02g07420 splicing factor, arginine/serine-rich 12, putative, expressed FN2634-S Chr2 3815001 3847000 0 0 Deletion 31999 LOC_Os02g07430 OsMADS29 - MADS-box family gene with MIKCc type-box, expressed FN2634-S Chr2 3815001 3847000 0 0 Deletion 31999 LOC_Os02g07440 DEFL78 - Defensin and Defensin-like DEFL family, expressed FN2634-S Chr2 3815001 3847000 0 0 Deletion 31999 LOC_Os02g07450 core histone H2A/H2B/H3/H4, putative, expressed FN2634-S Chr2 9644233 9644239 0 0 Deletion 6 HET FN2634-S Chr3 13952786 13952787 0 0 Deletion 1 HET FN2634-S Chr3 15472926 C-A 0 0 Single Base Substitution 0 HET FN2634-S Chr3 16228839 16228842 0 0 Deletion 3 HET FN2634-S Chr3 18617726 T-C 0 0 Single Base Substitution 0 HET FN2634-S Chr3 20393500 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g36760 expressed protein FN2634-S Chr3 31572133 A-C 0 0 Single Base Substitution 0 Homo FN2634-S Chr3 32790080 32790081 0 0 Insertion 1 Homo FN2634-S Chr3 532718 A-T 0 0 Single Base Substitution 0 HET FN2634-S Chr3 5378927 5378938 0 0 Deletion 11 frameshift_variant Homo LOC_Os03g10540 OsFBX78 - F-box domain containing protein, expressed FN2634-S Chr3 6024384 6024385 0 0 Deletion 1 Homo FN2634-S Chr3 9233155 G-A 0 0 Single Base Substitution 0 Homo FN2634-S Chr4 22258064 A-T 0 0 Single Base Substitution 0 Homo FN2634-S Chr4 22850157 A-T 0 0 Single Base Substitution 0 Homo FN2634-S Chr4 24050903 24050904 0 0 Deletion 1 frameshift_variant Homo LOC_Os04g40470 cytochrome P450, putative, expressed FN2634-S Chr4 26628989 26628995 0 0 Deletion 6 Homo FN2634-S Chr4 27043576 C-A 0 0 Single Base Substitution 0 HET FN2634-S Chr4 27270079 A-T 0 0 Single Base Substitution 0 Homo FN2634-S Chr5 13260095 T-A 0 0 Single Base Substitution 0 HET FN2634-S Chr5 22624518 22624520 0 0 Deletion 2 Homo FN2634-S Chr5 22688069 C-T 0 0 Single Base Substitution 0 HET FN2634-S Chr5 27925977 C-T 0 0 Single Base Substitution 0 Homo FN2634-S Chr5 27961482 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g48790 expressed protein FN2634-S Chr5 6647092 6647100 0 0 Deletion 8 HET FN2634-S Chr6 11730669 A-T 0 0 Single Base Substitution 0 HET FN2634-S Chr6 15949502 15949505 0 0 Deletion 3 HET FN2634-S Chr6 19641001 19715000 0 0 Deletion 73999 LOC_Os06g33750 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2634-S Chr6 19641001 19715000 0 0 Deletion 73999 LOC_Os06g33770 retrotransposon, putative, centromere-specific FN2634-S Chr6 19641001 19715000 0 0 Deletion 73999 LOC_Os06g33780 expressed protein FN2634-S Chr6 19641001 19715000 0 0 Deletion 73999 LOC_Os06g33790 hypothetical protein FN2634-S Chr6 19641001 19715000 0 0 Deletion 73999 LOC_Os06g33800 hypothetical protein FN2634-S Chr6 19641001 19715000 0 0 Deletion 73999 LOC_Os06g33810 zinc finger protein, putative, expressed FN2634-S Chr6 19641001 19715000 0 0 Deletion 73999 LOC_Os06g33820 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2634-S Chr6 19641001 19715000 0 0 Deletion 73999 LOC_Os06g33830 transposon protein, putative, CACTA, En/Spm sub-class FN2634-S Chr6 19641001 19715000 0 0 Deletion 73999 LOC_Os06g33840 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2634-S Chr6 19641001 19715000 0 0 Deletion 73999 LOC_Os06g33850 retrotransposon protein, putative, unclassified FN2634-S Chr6 19641001 19715000 0 0 Deletion 73999 LOC_Os06g33860 retrotransposon protein, putative, unclassified, expressed FN2634-S Chr6 19641001 19715000 0 0 Deletion 73999 LOC_Os06g33870 transposon protein, putative, CACTA, En/Spm sub-class FN2634-S Chr6 19641001 19715000 0 0 Deletion 73999 LOC_Os06g33880 expressed protein FN2634-S Chr6 19641001 19715000 0 0 Deletion 73999 LOC_Os06g33890 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2634-S Chr6 26976870 26976871 0 0 Deletion 1 Homo FN2634-S Chr7 17674656 17674661 0 0 Deletion 5 HET FN2634-S Chr7 26258241 G-A 0 0 Single Base Substitution 0 Homo FN2634-S Chr8 14937119 14937120 0 0 Deletion 1 HET FN2634-S Chr8 25798900 25798901 0 0 Deletion 1 Homo FN2634-S Chr8 3225183 T-C 0 0 Single Base Substitution 0 HET FN2634-S Chr8 3568657 3568659 0 0 Deletion 2 Homo FN2634-S Chr8 8208359 G-A 0 0 Single Base Substitution 0 HET FN2634-S Chr9 16248012 G-T 0 0 Single Base Substitution 0 HET FN2634-S Chr9 2025241 G-T 0 0 Single Base Substitution 0 Homo FN2634-S Chr9 22833921 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os09g39820 retrotransposon protein, putative, unclassified, expressed FN2634-S Chr9 4203786 4203790 0 0 Deletion 4 Homo FN2634-S Chr9 752329 T-C 0 0 Single Base Substitution 0 Homo