FN2656-S Chr1 10177333 10177337 0 0 Deletion 4 frameshift_variant HET LOC_Os01g18180 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2656-S Chr1 1162213 1162224 0 0 Deletion 11 Homo FN2656-S Chr1 29646797 29646798 0 0 Deletion 1 Homo FN2656-S Chr1 4655561 G-A 0 0 Single Base Substitution 0 HET FN2656-S Chr10 16546967 C-T 0 0 Single Base Substitution 0 Homo FN2656-S Chr10 19459804 19459806 0 0 Deletion 2 HET FN2656-S Chr10 6803825 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os10g12220 retrotransposon protein, putative, Ty3-gypsy subclass FN2656-S Chr10 8832527 8832528 0 0 Deletion 1 frameshift_variant HET LOC_Os10g17510 transposon protein, putative, Ac/Ds sub-class, expressed FN2656-S Chr11 1319881 1319891 0 0 Deletion 10 Homo FN2656-S Chr11 15351998 C-T 0 0 Single Base Substitution 0 Homo FN2656-S Chr11 16749525 G-A 0 0 Single Base Substitution 0 Homo FN2656-S Chr11 19628155 C-A 0 0 Single Base Substitution 0 HET FN2656-S Chr11 24201711 24201728 0 0 Deletion 17 Homo FN2656-S Chr11 25284009 C-T 0 0 Single Base Substitution 0 HET FN2656-S Chr11 2546014 2546018 0 0 Deletion 4 Homo FN2656-S Chr11 26037426 C-T 0 0 Single Base Substitution 0 HET FN2656-S Chr11 27195885 T-A 0 0 Single Base Substitution 0 Homo FN2656-S Chr11 28176843 A-T 0 0 Single Base Substitution 0 HET FN2656-S Chr11 644937 644950 0 0 Deletion 13 Homo FN2656-S Chr11 9873874 C-T 0 0 Single Base Substitution 0 HET FN2656-S Chr12 13120896 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os12g23210 expressed protein FN2656-S Chr12 1816568 Chr5 24756772 0 Translocation 0 FN2656-S Chr12 1816574 Chr5 24756620 0 Translocation 0 FN2656-S Chr12 19206691 G-A 0 0 Single Base Substitution 0 HET FN2656-S Chr12 2387976 2387993 0 0 Deletion 17 HET FN2656-S Chr12 26436879 G-A 0 0 Single Base Substitution 0 HET FN2656-S Chr12 27161448 A-G 0 0 Single Base Substitution 0 HET FN2656-S Chr12 3912336 3912339 0 0 Deletion 3 HET FN2656-S Chr2 20127525 20127531 0 0 Deletion 6 splice_acceptor_variant&disruptive_inframe_deletion&splice_region_variant&intron_variant HET LOC_Os02g33730 ubiquinol-cytochrome C reductase hinge protein, putative, expressed FN2656-S Chr2 21843589 T-G 0 0 Single Base Substitution 0 HET FN2656-S Chr2 22470361 Chr1 33825445 0 Translocation 0 FN2656-S Chr2 22470361 Chr1 33825445 0 Translocation 0 LOC_Os01g58530 NB-ARC/LRR disease resistance protein, putative, expressed FN2656-S Chr2 22470367 Chr1 33824808 0 Translocation 0 FN2656-S Chr2 22470367 Chr1 33824808 0 Translocation 0 LOC_Os01g58530 NB-ARC/LRR disease resistance protein, putative, expressed FN2656-S Chr2 28389313 T-C 0 0 Single Base Substitution 0 HET FN2656-S Chr2 4396816 4396818 0 0 Insertion 2 HET FN2656-S Chr2 9553036 G-A 0 0 Single Base Substitution 0 HET FN2656-S Chr3 16939040 G-A 0 0 Single Base Substitution 0 Homo FN2656-S Chr3 16939041 A-T 0 0 Single Base Substitution 0 Homo FN2656-S Chr3 20754338 20754339 0 0 Deletion 1 HET FN2656-S Chr3 23133210 23133212 0 0 Insertion 2 HET FN2656-S Chr3 268159 Chr2 29684992 0 Translocation 0 FN2656-S Chr3 268164 Chr2 29684996 0 Translocation 0 FN2656-S Chr3 30099420 G-C 0 0 Single Base Substitution 0 Homo FN2656-S Chr3 31521370 31521374 0 0 Deletion 4 Homo FN2656-S Chr3 34514925 A-G 0 0 Single Base Substitution 0 HET FN2656-S Chr3 35178962 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os03g62090 CESA5 - cellulose synthase, expressed FN2656-S Chr3 35215054 35215056 0 0 Deletion 2 Homo FN2656-S Chr3 35625244 A-G 0 0 Single Base Substitution 0 HET FN2656-S Chr3 6166646 A-T 0 0 Single Base Substitution 0 Homo FN2656-S Chr4 30227532 30227534 0 0 Deletion 2 frameshift_variant Homo LOC_Os04g51060 expressed protein FN2656-S Chr4 32062697 32062698 0 0 Deletion 1 Homo FN2656-S Chr4 34215226 G-T 0 0 Single Base Substitution 0 Homo FN2656-S Chr5 11356865 11356878 0 0 Deletion 13 Homo FN2656-S Chr5 12959923 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g22840 expressed protein FN2656-S Chr5 16987001 16999000 0 0 Deletion 11999 LOC_Os05g28970 expressed protein FN2656-S Chr5 16987001 16999000 0 0 Deletion 11999 LOC_Os05g28980 drought induced 19 protein, putative, expressed FN2656-S Chr5 16987001 16999000 0 0 Deletion 11999 LOC_Os05g28990 expressed protein FN2656-S Chr5 16987001 16999000 0 0 Deletion 11999 LOC_Os05g29000 expressed protein FN2656-S Chr5 17685142 C-G 0 0 Single Base Substitution 0 Homo FN2656-S Chr5 20410264 20410276 0 0 Deletion 12 Homo FN2656-S Chr5 23314067 23314073 0 0 Deletion 6 Homo FN2656-S Chr5 25419405 G-A 0 0 Single Base Substitution 0 HET FN2656-S Chr6 10487633 G-A 0 0 Single Base Substitution 0 HET FN2656-S Chr6 11184329 C-T 0 0 Single Base Substitution 0 HET FN2656-S Chr6 12412543 12412544 0 0 Deletion 1 HET FN2656-S Chr6 13200104 13200105 0 0 Deletion 1 HET FN2656-S Chr6 17500502 A-T 0 0 Single Base Substitution 0 HET FN2656-S Chr6 23190926 C-A 0 0 Single Base Substitution 0 HET FN2656-S Chr6 26487539 C-T 0 0 Single Base Substitution 0 HET FN2656-S Chr6 26487542 A-T 0 0 Single Base Substitution 0 HET FN2656-S Chr6 26707474 A-T 0 0 Single Base Substitution 0 HET FN2656-S Chr7 10118511 G-A 0 0 Single Base Substitution 0 HET FN2656-S Chr7 12618896 C-T 0 0 Single Base Substitution 0 HET FN2656-S Chr7 15390130 C-T 0 0 Single Base Substitution 0 HET FN2656-S Chr7 15414217 T-C 0 0 Single Base Substitution 0 HET FN2656-S Chr7 28158777 A-G 0 0 Single Base Substitution 0 HET FN2656-S Chr7 28838992 28839002 0 0 Deletion 10 HET FN2656-S Chr7 4145216 4145230 0 0 Deletion 14 HET FN2656-S Chr8 14513929 Chr1 29953971 0 Translocation 0 LOC_Os08g23990 retrotransposon protein, putative, unclassified, expressed FN2656-S Chr8 14513930 Chr1 29953040 0 Translocation 0 LOC_Os08g23990 retrotransposon protein, putative, unclassified, expressed FN2656-S Chr8 192323 Chr7 4497657 0 Translocation 0 LOC_Os08g01300 zinc finger DHHC domain-containing protein, putative, expressed FN2656-S Chr8 2160701 C-T 0 0 Single Base Substitution 0 SPLICE_SITE_DONOR HET LOC_Os08g04420 tyrosine protein kinase domain containing protein, putative, expressed FN2656-S Chr8 435452 Chr7 4497647 0 Translocation 0 LOC_Os08g01710 GLTP domain containing protein, putative, expressed FN2656-S Chr8 7521889 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os08g12690 retrotransposon protein, putative, Ty3-gypsy subclass FN2656-S Chr9 11307386 Chr6 22141205 0 Translocation 0 FN2656-S Chr9 1328513 C-T 0 0 Single Base Substitution 0 HET FN2656-S Chr9 1541936 1541951 0 0 Deletion 15 HET FN2656-S Chr9 15644506 T-A 0 0 Single Base Substitution 0 HET FN2656-S Chr9 17446565 G-C 0 0 Single Base Substitution 0 HET FN2656-S Chr9 20613353 A-C 0 0 Single Base Substitution 0 HET FN2656-S Chr9 2295382 A-T 0 0 Single Base Substitution 0 HET FN2656-S Chr9 2295385 T-C 0 0 Single Base Substitution 0 HET FN2656-S Chr9 2957495 2957498 0 0 Deletion 3 HET FN2656-S Chr9 3527050 3557421 0 0 Inversion 0 FN2656-S Chr9 3527050 3557421 0 0 Inversion 0 LOC_Os09g07250 retrotransposon protein, putative, unclassified, expressed FN2656-S Chr9 3527224 3558152 0 0 Inversion 0 FN2656-S Chr9 3527224 3558152 0 0 Inversion 0 LOC_Os09g07250 retrotransposon protein, putative, unclassified, expressed FN2656-S Chr9 3557421 Chr8 22088590 0 Translocation 0 LOC_Os08g35050 ARID/BRIGHT DNA-binding domain containing protein, expressed FN2656-S Chr9 3557421 Chr8 22088590 0 Translocation 0 LOC_Os09g07250 retrotransposon protein, putative, unclassified, expressed FN2656-S Chr9 3558145 Chr8 22088605 0 Translocation 0 LOC_Os08g35050 ARID/BRIGHT DNA-binding domain containing protein, expressed FN2656-S Chr9 3558145 Chr8 22088605 0 Translocation 0 LOC_Os09g07250 retrotransposon protein, putative, unclassified, expressed