FN2659-S Chr1 23217311 G-A 0 0 Single Base Substitution 0 Homo FN2659-S Chr1 796632 796634 0 0 Deletion 2 HET FN2659-S Chr10 13650187 Chr6 16152481 0 Translocation 0 FN2659-S Chr10 13650187 Chr6 16152481 0 Translocation 0 LOC_Os06g28390 retrotransposon protein, putative, unclassified, expressed FN2659-S Chr10 15609345 15754220 0 0 Inversion 0 LOC_Os10g30054 ENT domain containing protein, expressed FN2659-S Chr10 15609350 15754220 0 0 Inversion 0 LOC_Os10g30054 ENT domain containing protein, expressed FN2659-S Chr10 16831264 16831276 0 0 Deletion 12 disruptive_inframe_deletion Homo LOC_Os10g32030 retrotransposon protein, putative, unclassified, expressed FN2659-S Chr10 21306514 C-A 0 0 Single Base Substitution 0 HET FN2659-S Chr10 9235004 C-T 0 0 Single Base Substitution 0 HET FN2659-S Chr11 14852190 C-T 0 0 Single Base Substitution 0 HET FN2659-S Chr11 23109845 23109846 0 0 Deletion 1 HET FN2659-S Chr12 10862208 C-A 0 0 Single Base Substitution 0 HET FN2659-S Chr12 12166233 T-G 0 0 Single Base Substitution 0 HET FN2659-S Chr12 12166235 A-C 0 0 Single Base Substitution 0 HET FN2659-S Chr12 12520176 A-G 0 0 Single Base Substitution 0 HET FN2659-S Chr12 15495816 A-C 0 0 Single Base Substitution 0 HET FN2659-S Chr12 16182382 Chr4 32905475 0 Translocation 0 LOC_Os04g55320 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2659-S Chr12 16182382 Chr4 32905475 0 Translocation 0 LOC_Os12g27490 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2659-S Chr12 23121146 T-A 0 0 Single Base Substitution 0 HET FN2659-S Chr12 654640 C-A 0 0 Single Base Substitution 0 HET FN2659-S Chr12 7862766 C-T 0 0 Single Base Substitution 0 HET FN2659-S Chr12 8783949 A-G 0 0 Single Base Substitution 0 HET FN2659-S Chr12 9681578 C-T 0 0 Single Base Substitution 0 HET FN2659-S Chr2 12584953 T-G 0 0 Single Base Substitution 0 Homo FN2659-S Chr2 14119805 G-A 0 0 Single Base Substitution 0 HET FN2659-S Chr2 17267034 G-C 0 0 Single Base Substitution 0 HET FN2659-S Chr2 17464852 A-G 0 0 Single Base Substitution 0 Homo FN2659-S Chr2 20529303 G-A 0 0 Single Base Substitution 0 HET FN2659-S Chr2 23473348 C-T 0 0 Single Base Substitution 0 HET FN2659-S Chr2 27957220 27957224 0 0 Deletion 4 HET FN2659-S Chr2 30823133 C-A 0 0 Single Base Substitution 0 HET FN2659-S Chr2 30823134 G-A 0 0 Single Base Substitution 0 HET FN2659-S Chr3 10370593 C-A 0 0 Single Base Substitution 0 HET FN2659-S Chr3 11658533 A-T 0 0 Single Base Substitution 0 HET FN2659-S Chr3 12436286 C-T 0 0 Single Base Substitution 0 Homo FN2659-S Chr3 17376767 A-G 0 0 Single Base Substitution 0 HET FN2659-S Chr3 18064005 A-T 0 0 Single Base Substitution 0 HET FN2659-S Chr3 18064007 T-G 0 0 Single Base Substitution 0 HET FN2659-S Chr3 2408863 G-T 0 0 Single Base Substitution 0 HET FN2659-S Chr3 24941870 24941872 0 0 Deletion 2 Homo FN2659-S Chr3 24941984 G-A 0 0 Single Base Substitution 0 Homo FN2659-S Chr3 24941985 C-T 0 0 Single Base Substitution 0 Homo FN2659-S Chr3 24948172 24948176 0 0 Deletion 4 Homo FN2659-S Chr3 29025841 C-T 0 0 Single Base Substitution 0 Homo FN2659-S Chr3 31940659 C-T 0 0 Single Base Substitution 0 HET FN2659-S Chr3 33871859 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os03g59510 retrotransposon protein, putative, unclassified, expressed FN2659-S Chr3 34009001 34022000 0 0 Deletion 12999 LOC_Os03g59740 ADP-ribosylation factor, putative, expressed FN2659-S Chr3 34981365 34981366 0 0 Deletion 1 HET FN2659-S Chr4 13067954 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g23020 retrotransposon protein, putative, unclassified, expressed FN2659-S Chr4 17940237 Chr2 13401460 0 Translocation 0 LOC_Os04g30040 jacalin-like lectin domain containing protein, expressed FN2659-S Chr4 21109563 C-T 0 0 Single Base Substitution 0 HET FN2659-S Chr4 29856679 C-T 0 0 Single Base Substitution 0 HET FN2659-S Chr4 32929666 32929667 0 0 Insertion 1 HET FN2659-S Chr4 5150782 5497977 0 0 Inversion 0 FN2659-S Chr4 5150798 Chr3 13830539 0 Translocation 0 FN2659-S Chr4 5150942 Chr3 13830547 0 Translocation 0 FN2659-S Chr4 5150958 5497987 0 0 Inversion 0 FN2659-S Chr4 7068837 A-C 0 0 Single Base Substitution 0 HET FN2659-S Chr4 7424000 T-C 0 0 Single Base Substitution 0 HET FN2659-S Chr4 8409851 8409852 0 0 Insertion 1 frameshift_variant HET LOC_Os04g14970 retrotransposon protein, putative, Ty1-copia subclass, expressed FN2659-S Chr4 9088817 9088819 0 0 Deletion 2 HET FN2659-S Chr4 919745 919757 0 0 Deletion 12 Homo FN2659-S Chr5 10007414 10007415 0 0 Insertion 1 HET FN2659-S Chr5 15913918 Chr3 1302376 0 Translocation 0 FN2659-S Chr5 16846883 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g28720 PPR repeat containing protein, expressed FN2659-S Chr5 24853505 T-G 0 0 Single Base Substitution 0 HET FN2659-S Chr5 4179874 T-C 0 0 Single Base Substitution 0 HET FN2659-S Chr5 4191452 T-G 0 0 Single Base Substitution 0 HET FN2659-S Chr5 5907370 G-A 0 0 Single Base Substitution 0 HET FN2659-S Chr6 14280966 T-A 0 0 Single Base Substitution 0 HET FN2659-S Chr6 14729607 G-T 0 0 Single Base Substitution 0 HET FN2659-S Chr6 21510611 G-A 0 0 Single Base Substitution 0 HET FN2659-S Chr6 21658664 T-A 0 0 Single Base Substitution 0 HET FN2659-S Chr6 25354194 25354196 0 0 Insertion 2 HET FN2659-S Chr6 26788694 A-G 0 0 Single Base Substitution 0 HET FN2659-S Chr6 29719276 29719280 0 0 Deletion 4 Homo FN2659-S Chr7 14708040 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os07g25650 expressed protein FN2659-S Chr7 22054665 22054667 0 0 Deletion 2 HET FN2659-S Chr7 26695193 Chr1 14588958 0 Translocation 0 FN2659-S Chr7 26695193 Chr1 14588958 0 Translocation 0 LOC_Os01g25740 powdery mildew resistance protein PM3F, putative, expressed FN2659-S Chr7 2847030 2847031 0 0 Deletion 1 HET FN2659-S Chr7 28506560 G-A 0 0 Single Base Substitution 0 HET FN2659-S Chr7 5789409 T-C 0 0 Single Base Substitution 0 HET FN2659-S Chr8 10721454 10721455 0 0 Deletion 1 HET FN2659-S Chr8 17662898 G-T 0 0 Single Base Substitution 0 HET FN2659-S Chr8 18105086 C-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os08g29530 double-stranded RNA binding motif containing protein, expressed FN2659-S Chr8 19143032 T-A 0 0 Single Base Substitution 0 HET FN2659-S Chr8 22463919 G-T 0 0 Single Base Substitution 0 Homo FN2659-S Chr9 10259094 C-T 0 0 Single Base Substitution 0 HET FN2659-S Chr9 13448251 Chr8 7145722 0 Translocation 0 LOC_Os08g12130 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2659-S Chr9 13448251 Chr8 7145722 0 Translocation 0 LOC_Os09g22230 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2659-S Chr9 15693204 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os09g26090 retrotransposon, putative, centromere-specific, expressed FN2659-S Chr9 21246712 Chr2 18115022 0 Translocation 0 FN2659-S Chr9 22634894 G-A 0 0 Single Base Substitution 0 HET FN2659-S Chr9 7984942 C-T 0 0 Single Base Substitution 0 HET FN2659-S Chr9 8376866 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os09g14140 retrotransposon protein, putative, unclassified, expressed FN2659-S Chr9 8682605 A-G 0 0 Single Base Substitution 0 HET