FN2660-S-1 Chr1 12883923 12883923 0 0 Insertion 2 INTERGENIC HET FN2660-S-1 Chr1 19027873 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN2660-S-1 Chr1 19737218 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN2660-S-1 Chr1 28068264 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN2660-S-1 Chr1 29329544 T-C 0 0 Single Base Substitution 0 INTRON HET FN2660-S-1 Chr1 30257001 30349000 0 0 Deletion 91999 LOC_Os01g52650 POEI44 - Pollen Ole e I allergen and extensin family protein precursor, expressed FN2660-S-1 Chr1 30257001 30349000 0 0 Deletion 91999 LOC_Os01g52660 POEI51 - Pollen Ole e I allergen and extensin family protein precursor, expressed FN2660-S-1 Chr1 30257001 30349000 0 0 Deletion 91999 LOC_Os01g52670 expressed protein FN2660-S-1 Chr1 30257001 30349000 0 0 Deletion 91999 LOC_Os01g52680 OsMADS32 - MADS-box family gene with MIKCc type-box, expressed FN2660-S-1 Chr1 30257001 30349000 0 0 Deletion 91999 LOC_Os01g52690 retrotransposon protein, putative, unclassified, expressed FN2660-S-1 Chr1 30257001 30349000 0 0 Deletion 91999 LOC_Os01g52700 expressed protein FN2660-S-1 Chr1 30257001 30349000 0 0 Deletion 91999 LOC_Os01g52710 glycosyl transferase 8 domain containing protein, putative, expressed FN2660-S-1 Chr1 30257001 30349000 0 0 Deletion 91999 LOC_Os01g52720 Complex I intermediate-associated protein 30 domain containing protein, putative, expressed FN2660-S-1 Chr1 30257001 30349000 0 0 Deletion 91999 LOC_Os01g52730 DUF584 domain containing protein, putative, expressed FN2660-S-1 Chr1 30257001 30349000 0 0 Deletion 91999 LOC_Os01g52740 expressed protein FN2660-S-1 Chr1 30257001 30349000 0 0 Deletion 91999 LOC_Os01g52750 OsSub3 - Putative Subtilisin homologue, expressed FN2660-S-1 Chr1 30257001 30349000 0 0 Deletion 91999 LOC_Os01g57294 expressed protein FN2660-S-1 Chr1 32063713 T-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN2660-S-1 Chr1 507903 507904 0 0 Deletion 1 upstream_gene_variant HET FN2660-S-1 Chr10 3606127 3606134 0 0 Deletion 7 INTERGENIC HOMO FN2660-S-1 Chr10 3669339 Chr4 33407149 0 Translocation 0 FN2660-S-1 Chr10 8726525 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN2660-S-1 Chr10 9215489 9215496 0 0 Deletion 7 INTERGENIC HET FN2660-S-1 Chr11 13708389 Chr6 11097874 0 Translocation 0 LOC_Os11g24120 expressed protein FN2660-S-1 Chr11 15191495 15191496 0 0 Deletion 1 frameshift_variant HET LOC_Os11g26500 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2660-S-1 Chr11 15578811 15578811 0 0 Insertion 6 upstream_gene_variant HET FN2660-S-1 Chr11 15906367 15906367 0 0 Insertion 18 upstream_gene_variant HET FN2660-S-1 Chr11 16724958 16724958 0 0 Insertion 9 upstream_gene_variant HET FN2660-S-1 Chr11 19552343 19552344 0 0 Deletion 1 frameshift_variant HET LOC_Os11g33070 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2660-S-1 Chr11 21798356 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os11g36950 T-complex protein 1 subunit theta, putative, expressed FN2660-S-1 Chr11 24774111 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN2660-S-1 Chr11 25113040 25113040 0 0 Insertion 6 upstream_gene_variant HET FN2660-S-1 Chr11 27437891 Chr7 25323788 0 Translocation 0 FN2660-S-1 Chr12 10915341 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN2660-S-1 Chr12 13410062 Chr11 19402557 0 Translocation 0 FN2660-S-1 Chr12 14430760 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN2660-S-1 Chr12 14948404 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN2660-S-1 Chr12 15043437 C-G 0 0 Single Base Substitution 0 INTERGENIC HET FN2660-S-1 Chr12 248452 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN2660-S-1 Chr12 26860186 26860187 0 0 Deletion 1 SPLICE_SITE_REGION HET FN2660-S-1 Chr12 4414775 4414775 0 0 Insertion 40 intron_variant HET FN2660-S-1 Chr12 6019907 6019907 0 0 Insertion 1 downstream_gene_variant HET FN2660-S-1 Chr2 18885656 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN2660-S-1 Chr2 2071700 Chr1 1500226 0 Translocation 0 LOC_Os01g03640 multicopper oxidase domain containing protein, expressed FN2660-S-1 Chr2 2491818 2491823 0 0 Deletion 5 INTRON HET FN2660-S-1 Chr2 34850036 34850038 0 0 Deletion 2 INTERGENIC HET FN2660-S-1 Chr2 4666999 4666999 0 0 Insertion 4 INTRON HET FN2660-S-1 Chr2 7954238 Chr1 15637503 0 Translocation 0 FN2660-S-1 Chr3 13326217 C-A 0 0 Single Base Substitution 0 INTRON HOMO FN2660-S-1 Chr3 16849124 G-T 0 0 Single Base Substitution 0 INTRON HET FN2660-S-1 Chr3 23835002 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN2660-S-1 Chr3 28369561 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN2660-S-1 Chr3 30923708 Chr1 22551039 0 Translocation 0 FN2660-S-1 Chr3 33256877 G-A 0 0 Single Base Substitution 0 INTRON HET FN2660-S-1 Chr3 35090458 35090461 0 0 Deletion 3 INTERGENIC HOMO FN2660-S-1 Chr3 6532810 6532810 0 0 Insertion 2 upstream_gene_variant HET FN2660-S-1 Chr3 8231561 8231561 0 0 Insertion 1 upstream_gene_variant HET FN2660-S-1 Chr4 11372582 11372758 0 0 Inversion 176 FN2660-S-1 Chr4 12638042 T-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN2660-S-1 Chr4 1367334 C-A 0 0 Single Base Substitution 0 INTRON HET FN2660-S-1 Chr4 17443250 17443250 0 0 Insertion 57 downstream_gene_variant HET FN2660-S-1 Chr4 19428291 C-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN2660-S-1 Chr4 26431561 26431563 0 0 Deletion 2 UTR_3_PRIME HET FN2660-S-1 Chr4 7420905 C-T 0 0 Single Base Substitution 0 INTRON HOMO FN2660-S-1 Chr5 10007414 10007414 0 0 Insertion 1 upstream_gene_variant HET FN2660-S-1 Chr5 12293134 12293134 0 0 Insertion 1 upstream_gene_variant HET FN2660-S-1 Chr5 12952156 12952156 0 0 Insertion 1 upstream_gene_variant HET FN2660-S-1 Chr5 14062997 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g24300 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2660-S-1 Chr5 16823315 C-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN2660-S-1 Chr5 24963282 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN2660-S-1 Chr5 24963283 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN2660-S-1 Chr5 3648026 3648040 0 0 Deletion 14 FRAME_SHIFT+START_LOST HET LOC_Os05g06970 peroxidase precursor, putative, expressed FN2660-S-1 Chr5 4409638 4409639 0 0 Deletion 1 upstream_gene_variant HET FN2660-S-1 Chr5 4492760 4492770 0 0 Deletion 10 downstream_gene_variant HET FN2660-S-1 Chr5 562189 562193 0 0 Deletion 4 INTERGENIC HOMO FN2660-S-1 Chr5 9019343 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g15970 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2660-S-1 Chr6 15262705 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN2660-S-1 Chr6 3255931 3255931 0 0 Insertion 2 INTRON HET FN2660-S-1 Chr7 10136799 Chr2 30553950 0 Translocation 0 FN2660-S-1 Chr7 10140869 Chr2 30553874 0 Translocation 0 FN2660-S-1 Chr7 10608441 G-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os07g17930 retrotransposon protein, putative, unclassified, expressed FN2660-S-1 Chr7 18909743 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN2660-S-1 Chr7 20457901 20457901 0 0 Insertion 4 upstream_gene_variant HET FN2660-S-1 Chr7 24240082 24240082 0 0 Insertion 31 upstream_gene_variant HET FN2660-S-1 Chr7 4486523 T-C 0 0 Single Base Substitution 0 INTRON HET FN2660-S-1 Chr7 4486524 C-T 0 0 Single Base Substitution 0 INTRON HET FN2660-S-1 Chr7 8139444 T-C 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN2660-S-1 Chr8 12696462 T-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN2660-S-1 Chr8 14390042 14390042 0 0 Insertion 2 INTRON HET FN2660-S-1 Chr8 14518896 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN2660-S-1 Chr8 17910649 17910649 0 0 Insertion 6 downstream_gene_variant HET FN2660-S-1 Chr8 17922675 17922699 0 0 Deletion 24 upstream_gene_variant HET FN2660-S-1 Chr8 19492637 C-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN2660-S-1 Chr8 20626123 T-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os08g33160 ZIM motif family protein, expressed FN2660-S-1 Chr8 22564733 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN2660-S-1 Chr8 25750222 T-C 0 0 Single Base Substitution 0 INTRON HET FN2660-S-1 Chr8 26581080 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN2660-S-1 Chr8 28224105 28224105 0 0 Insertion 2 INTERGENIC HOMO FN2660-S-1 Chr8 4159028 4159028 0 0 Insertion 1 upstream_gene_variant HET FN2660-S-1 Chr8 6625992 6625992 0 0 Insertion 6 downstream_gene_variant HET FN2660-S-1 Chr8 6636000 6636000 0 0 Insertion 1 downstream_gene_variant HET FN2660-S-1 Chr8 6973635 6973635 0 0 Insertion 2 downstream_gene_variant HET FN2660-S-1 Chr9 11260000 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os09g18360 expressed protein FN2660-S-1 Chr9 11260005 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os09g18360 expressed protein FN2660-S-1 Chr9 14621063 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN2660-S-1 Chr9 19074656 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os09g31970 3-hydroxy-3-methylglutaryl-coenzyme A reductase, putative, expressed FN2660-S-1 Chr9 5755891 5755892 0 0 Deletion 1 upstream_gene_variant HET FN2660-S-1 Chr9 6591940 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN2660-S-1 Chr9 6591942 A-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN2660-S-1 Chr9 9485176 9485176 0 0 Insertion 30 upstream_gene_variant HET