FN2662-S Chr1 17855884 C-T 0 0 Single Base Substitution 0 HET FN2662-S Chr1 23472682 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g41460 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2662-S Chr1 24931857 T-C 0 0 Single Base Substitution 0 HET FN2662-S Chr1 25532196 T-A 0 0 Single Base Substitution 0 HET FN2662-S Chr1 26069642 T-A 0 0 Single Base Substitution 0 HET FN2662-S Chr1 26069643 C-T 0 0 Single Base Substitution 0 HET FN2662-S Chr1 26069645 C-T 0 0 Single Base Substitution 0 HET FN2662-S Chr1 32323098 C-T 0 0 Single Base Substitution 0 Homo FN2662-S Chr1 35896812 35896813 0 0 Deletion 1 HET FN2662-S Chr1 37653578 G-A 0 0 Single Base Substitution 0 HET FN2662-S Chr1 37653579 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g64860 OsSub11 - Putative Subtilisin homologue, expressed FN2662-S Chr10 19293376 A-C 0 0 Single Base Substitution 0 HET FN2662-S Chr10 20026577 C-G 0 0 Single Base Substitution 0 HET FN2662-S Chr10 22643674 G-C 0 0 Single Base Substitution 0 HET FN2662-S Chr10 4970186 T-G 0 0 Single Base Substitution 0 HET FN2662-S Chr11 12749427 12749442 0 0 Deletion 15 HET FN2662-S Chr11 16590731 Chr6 27543274 0 Translocation 0 LOC_Os06g45530 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2662-S Chr11 16590731 Chr6 27543274 0 Translocation 0 LOC_Os11g28690 retrotransposon protein, putative, Ty3-gypsy subclass FN2662-S Chr11 2329282 C-T 0 0 Single Base Substitution 0 Homo FN2662-S Chr11 24003594 G-A 0 0 Single Base Substitution 0 HET FN2662-S Chr11 24335086 Chr1 34435521 0 Translocation 0 FN2662-S Chr11 24335086 Chr1 34435521 0 Translocation 0 LOC_Os01g59550 senescence-induced receptor-like serine/threonine-protein kinase precursor, putative, expressed FN2662-S Chr11 26124283 C-T 0 0 Single Base Substitution 0 HET FN2662-S Chr11 4144019 A-G 0 0 Single Base Substitution 0 Homo FN2662-S Chr11 4771355 4771360 0 0 Deletion 5 HET FN2662-S Chr12 16687548 16687551 0 0 Deletion 3 inframe_deletion Homo LOC_Os12g28250 disease resistance protein RPM1, putative, expressed FN2662-S Chr12 26509811 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os12g42660 AGC_AGC_other_GWLd.1 - ACG kinases include homologs to PKA, PKG and PKC, expressed FN2662-S Chr12 5023098 G-T 0 0 Single Base Substitution 0 HET FN2662-S Chr2 1407164 A-T 0 0 Single Base Substitution 0 HET FN2662-S Chr2 30830210 30830228 0 0 Deletion 18 HET FN2662-S Chr2 5638109 G-A 0 0 Single Base Substitution 0 HET FN2662-S Chr3 16106200 G-A 0 0 Single Base Substitution 0 HET FN2662-S Chr3 22147578 22147580 0 0 Insertion 2 HET FN2662-S Chr3 22873391 22873401 0 0 Deletion 10 HET FN2662-S Chr3 25224565 25224567 0 0 Insertion 2 HET FN2662-S Chr3 8024413 T-A 0 0 Single Base Substitution 0 HET FN2662-S Chr3 89130 89132 0 0 Deletion 2 HET FN2662-S Chr3 9579820 G-T 0 0 Single Base Substitution 0 HET FN2662-S Chr4 11372906 A-T 0 0 Single Base Substitution 0 HET FN2662-S Chr4 11853346 C-T 0 0 Single Base Substitution 0 STOP_GAINED HET LOC_Os04g21090 retrotransposon protein, putative, unclassified, expressed FN2662-S Chr4 12495712 C-T 0 0 Single Base Substitution 0 HET FN2662-S Chr4 19930828 G-A 0 0 Single Base Substitution 0 HET FN2662-S Chr4 20162424 C-T 0 0 Single Base Substitution 0 Homo FN2662-S Chr4 20795081 A-G 0 0 Single Base Substitution 0 Homo FN2662-S Chr4 7545585 C-T 0 0 Single Base Substitution 0 HET FN2662-S Chr5 1060047 G-T 0 0 Single Base Substitution 0 Homo FN2662-S Chr5 10868016 10879369 0 0 Inversion 0 LOC_Os05g18750 ribosomal protein L25, putative, expressed FN2662-S Chr5 10868016 10879369 0 0 Inversion 0 LOC_Os05g18760 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2662-S Chr5 10868028 10879387 0 0 Inversion 0 LOC_Os05g18750 ribosomal protein L25, putative, expressed FN2662-S Chr5 10868028 10879387 0 0 Inversion 0 LOC_Os05g18760 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2662-S Chr5 12032585 C-T 0 0 Single Base Substitution 0 HET FN2662-S Chr5 15741001 16010000 0 0 Deletion 268999 LOC_Os05g27080 retrotransposon protein, putative, unclassified, expressed FN2662-S Chr5 15741001 16010000 0 0 Deletion 268999 LOC_Os05g27090 basic helix-loop-helix domain containing protein, expressed FN2662-S Chr5 15741001 16010000 0 0 Deletion 268999 LOC_Os05g27100 expressed protein FN2662-S Chr5 15741001 16010000 0 0 Deletion 268999 LOC_Os05g27110 expressed protein FN2662-S Chr5 15741001 16010000 0 0 Deletion 268999 LOC_Os05g27120 DUF640 domain containing protein, putative, expressed FN2662-S Chr5 15741001 16010000 0 0 Deletion 268999 LOC_Os05g27130 transposon protein, putative, CACTA, En/Spm sub-class FN2662-S Chr5 15741001 16010000 0 0 Deletion 268999 LOC_Os05g27140 transposon protein, putative, CACTA, En/Spm sub-class FN2662-S Chr5 15741001 16010000 0 0 Deletion 268999 LOC_Os05g27160 hypothetical protein FN2662-S Chr5 15741001 16010000 0 0 Deletion 268999 LOC_Os05g27170 retrotransposon, putative, centromere-specific, expressed FN2662-S Chr5 15741001 16010000 0 0 Deletion 268999 LOC_Os05g27180 ligA, putative, expressed FN2662-S Chr5 15741001 16010000 0 0 Deletion 268999 LOC_Os05g27190 retrotransposon protein, putative, unclassified FN2662-S Chr5 15741001 16010000 0 0 Deletion 268999 LOC_Os05g27200 retrotransposon protein, putative, unclassified, expressed FN2662-S Chr5 15741001 16010000 0 0 Deletion 268999 LOC_Os05g27210 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2662-S Chr5 15741001 16010000 0 0 Deletion 268999 LOC_Os05g27220 expressed protein FN2662-S Chr5 15741001 16010000 0 0 Deletion 268999 LOC_Os05g27230 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2662-S Chr5 15741001 16010000 0 0 Deletion 268999 LOC_Os05g27240 expressed protein FN2662-S Chr5 15741001 16010000 0 0 Deletion 268999 LOC_Os05g27250 retrotransposon protein, putative, unclassified, expressed FN2662-S Chr5 15741001 16010000 0 0 Deletion 268999 LOC_Os05g27260 retrotransposon protein, putative, unclassified FN2662-S Chr5 15741001 16010000 0 0 Deletion 268999 LOC_Os05g27270 retrotransposon protein, putative, unclassified, expressed FN2662-S Chr5 15741001 16010000 0 0 Deletion 268999 LOC_Os05g27280 retrotransposon protein, putative, unclassified, expressed FN2662-S Chr5 15741001 16010000 0 0 Deletion 268999 LOC_Os05g27290 retrotransposon, putative, centromere-specific FN2662-S Chr5 15741001 16010000 0 0 Deletion 268999 LOC_Os05g27304 peptide transporter PTR2, putative, expressed FN2662-S Chr5 15741001 16010000 0 0 Deletion 268999 LOC_Os05g27320 VHS and GAT domain containing protein, expressed FN2662-S Chr5 15741001 16010000 0 0 Deletion 268999 LOC_Os05g27340 expressed protein FN2662-S Chr5 15741001 16010000 0 0 Deletion 268999 LOC_Os05g27350 expressed protein FN2662-S Chr5 15741001 16010000 0 0 Deletion 268999 LOC_Os05g27360 expressed protein FN2662-S Chr5 15741001 16010000 0 0 Deletion 268999 LOC_Os05g27370 expressed protein FN2662-S Chr5 15741001 16010000 0 0 Deletion 268999 LOC_Os05g27380 hypothetical protein FN2662-S Chr5 15741001 16010000 0 0 Deletion 268999 LOC_Os05g27390 retrotransposon protein, putative, unclassified FN2662-S Chr5 15741001 16010000 0 0 Deletion 268999 LOC_Os05g27400 retrotransposon protein, putative, unclassified, expressed FN2662-S Chr5 15741001 16010000 0 0 Deletion 268999 LOC_Os05g27410 retrotransposon protein, putative, unclassified, expressed FN2662-S Chr5 15741001 16010000 0 0 Deletion 268999 LOC_Os05g27420 retrotransposon protein, putative, unclassified FN2662-S Chr5 15741001 16010000 0 0 Deletion 268999 LOC_Os05g27430 retrotransposon protein, putative, unclassified, expressed FN2662-S Chr5 15741001 16010000 0 0 Deletion 268999 LOC_Os05g27440 retrotransposon, putative, centromere-specific, expressed FN2662-S Chr5 15741001 16010000 0 0 Deletion 268999 LOC_Os05g27450 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2662-S Chr5 15741001 16010000 0 0 Deletion 268999 LOC_Os05g27460 transposon protein, putative, CACTA, En/Spm sub-class FN2662-S Chr5 15741001 16010000 0 0 Deletion 268999 LOC_Os05g27470 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2662-S Chr5 15741001 16010000 0 0 Deletion 268999 LOC_Os05g27480 retrotransposon protein, putative, Ty3-gypsy subclass FN2662-S Chr5 15741001 16010000 0 0 Deletion 268999 LOC_Os05g27490 retrotransposon protein, putative, unclassified, expressed FN2662-S Chr5 15741001 16010000 0 0 Deletion 268999 LOC_Os05g27500 carboxyl-terminal proteinase, putative, expressed FN2662-S Chr5 15741001 16010000 0 0 Deletion 268999 LOC_Os05g27510 expressed protein FN2662-S Chr5 15741001 16010000 0 0 Deletion 268999 LOC_Os05g27520 expressed protein FN2662-S Chr5 20094675 C-T 0 0 Single Base Substitution 0 HET FN2662-S Chr5 24796036 G-A 0 0 Single Base Substitution 0 Homo FN2662-S Chr5 7611148 G-A 0 0 Single Base Substitution 0 HET FN2662-S Chr5 9577412 T-C 0 0 Single Base Substitution 0 HET FN2662-S Chr6 11800947 11800952 0 0 Deletion 5 HET FN2662-S Chr6 23681481 T-C 0 0 Single Base Substitution 0 HET FN2662-S Chr6 25686973 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os06g42710 transposon protein, putative, Mutator sub-class, expressed FN2662-S Chr6 4105499 A-G 0 0 Single Base Substitution 0 HET FN2662-S Chr6 7497278 7497286 0 0 Deletion 8 HET FN2662-S Chr7 1310014 C-A 0 0 Single Base Substitution 0 HET FN2662-S Chr7 13119246 G-A 0 0 Single Base Substitution 0 HET FN2662-S Chr7 19833098 C-G 0 0 Single Base Substitution 0 HET FN2662-S Chr7 21073468 21073472 0 0 Deletion 4 frameshift_variant Homo LOC_Os07g35190 expressed protein FN2662-S Chr7 2559206 G-A 0 0 Single Base Substitution 0 HET FN2662-S Chr7 26264662 C-T 0 0 Single Base Substitution 0 HET FN2662-S Chr7 6512190 6650281 0 0 Inversion 0 LOC_Os07g11780 transposon protein, putative, CACTA, En/Spm sub-class FN2662-S Chr7 8388856 8388858 0 0 Deletion 2 Homo FN2662-S Chr8 15105897 C-T 0 0 Single Base Substitution 0 HET FN2662-S Chr8 20991676 20991678 0 0 Deletion 2 Homo FN2662-S Chr8 7278867 T-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os08g12350 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2662-S Chr8 7751101 C-A 0 0 Single Base Substitution 0 HET FN2662-S Chr9 4076991 G-A 0 0 Single Base Substitution 0 HET FN2662-S Chr9 5709653 G-C 0 0 Single Base Substitution 0 HET FN2662-S Chr9 8573025 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os09g14500 retrotransposon protein, putative, unclassified, expressed