FN2668-S Chr1 11182700 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g19720 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2668-S Chr1 12013719 A-G 0 0 Single Base Substitution 0 HET FN2668-S Chr1 12900153 C-A 0 0 Single Base Substitution 0 HET FN2668-S Chr1 13784679 C-T 0 0 Single Base Substitution 0 HET FN2668-S Chr1 15127295 G-A 0 0 Single Base Substitution 0 HET FN2668-S Chr1 15127296 C-A 0 0 Single Base Substitution 0 HET FN2668-S Chr1 22457931 C-T 0 0 Single Base Substitution 0 HET FN2668-S Chr1 27119913 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os01g47450 OsCttP1 - Putative C-terminal processing peptidase homologue, expressed FN2668-S Chr1 27467256 27467258 0 0 Deletion 2 HET FN2668-S Chr1 28106725 28106732 0 0 Deletion 7 HET FN2668-S Chr1 37383500 G-T 0 0 Single Base Substitution 0 HET FN2668-S Chr1 40366243 G-A 0 0 Single Base Substitution 0 HET FN2668-S Chr1 4533343 G-T 0 0 Single Base Substitution 0 HET FN2668-S Chr10 1131478 G-C 0 0 Single Base Substitution 0 HET FN2668-S Chr10 11677147 G-A 0 0 Single Base Substitution 0 HET FN2668-S Chr10 12325811 C-A 0 0 Single Base Substitution 0 HET FN2668-S Chr10 2501806 T-C 0 0 Single Base Substitution 0 HET FN2668-S Chr10 3643919 3643920 0 0 Deletion 1 HET FN2668-S Chr10 7463387 C-T 0 0 Single Base Substitution 0 HET FN2668-S Chr10 9573765 9573775 0 0 Deletion 10 HET FN2668-S Chr11 10971718 10971719 0 0 Deletion 1 Homo FN2668-S Chr11 11558331 11558333 0 0 Insertion 2 HET FN2668-S Chr11 17858815 G-A 0 0 Single Base Substitution 0 HET FN2668-S Chr12 10159353 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g17740 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2668-S Chr12 11417955 11417956 0 0 Insertion 1 HET FN2668-S Chr12 1483334 C-T 0 0 Single Base Substitution 0 HET FN2668-S Chr12 19301303 19301315 0 0 Deletion 12 HET FN2668-S Chr12 22082587 22082597 0 0 Deletion 10 HET FN2668-S Chr12 22101250 T-C 0 0 Single Base Substitution 0 HET FN2668-S Chr12 23031797 23031803 0 0 Deletion 6 inframe_deletion Homo LOC_Os12g37530 expressed protein FN2668-S Chr12 24484921 T-A 0 0 Single Base Substitution 0 HET FN2668-S Chr12 855933 855935 0 0 Deletion 2 HET FN2668-S Chr2 11224512 11224513 0 0 Deletion 1 frameshift_variant HET LOC_Os02g19230 conserved hypothetical protein FN2668-S Chr2 13843421 T-A 0 0 Single Base Substitution 0 HET FN2668-S Chr2 17544798 17544799 0 0 Deletion 1 HET FN2668-S Chr2 18742844 C-T 0 0 Single Base Substitution 0 Homo FN2668-S Chr2 19743605 G-A 0 0 Single Base Substitution 0 STOP_GAINED HET LOC_Os02g33210 retrotransposon protein, putative, unclassified, expressed FN2668-S Chr2 20405646 T-A 0 0 Single Base Substitution 0 HET FN2668-S Chr2 20405647 T-A 0 0 Single Base Substitution 0 HET FN2668-S Chr2 20406091 T-G 0 0 Single Base Substitution 0 HET FN2668-S Chr2 22625218 G-A 0 0 Single Base Substitution 0 HET FN2668-S Chr2 22685756 A-T 0 0 Single Base Substitution 0 HET FN2668-S Chr2 24514837 C-T 0 0 Single Base Substitution 0 HET FN2668-S Chr2 31132030 31132053 0 0 Deletion 23 HET FN2668-S Chr2 32100281 C-T 0 0 Single Base Substitution 0 HET FN2668-S Chr2 34710217 34710219 0 0 Deletion 2 Homo FN2668-S Chr2 6956259 6956267 0 0 Deletion 8 HET FN2668-S Chr2 7035001 7056000 0 0 Deletion 20999 LOC_Os02g13210 transposable element protein, putative, containing Pfam profile: PF03004, Transposase_24, expressed FN2668-S Chr2 7035001 7056000 0 0 Deletion 20999 LOC_Os02g13220 F-box family protein, putative, expressed FN2668-S Chr2 7035001 7056000 0 0 Deletion 20999 LOC_Os02g13230 transposon protein, putative, CACTA, En/Spm sub-class FN2668-S Chr2 7035001 7056000 0 0 Deletion 20999 LOC_Os02g13240 transposon protein, putative, CACTA, En/Spm sub-class FN2668-S Chr2 7113972 G-C 0 0 Single Base Substitution 0 HET FN2668-S Chr2 7113975 G-A 0 0 Single Base Substitution 0 HET FN2668-S Chr2 7113979 G-A 0 0 Single Base Substitution 0 HET FN2668-S Chr3 17490342 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g30700 retrotransposon protein, putative, unclassified, expressed FN2668-S Chr3 18233471 C-T 0 0 Single Base Substitution 0 HET FN2668-S Chr3 22334453 22334484 0 0 Deletion 31 HET FN2668-S Chr3 22607473 22607488 0 0 Insertion 15 HET FN2668-S Chr3 26316326 26316337 0 0 Deletion 11 Homo FN2668-S Chr3 30380760 30380761 0 0 Deletion 1 HET FN2668-S Chr3 35758835 35759053 0 0 Inversion 0 FN2668-S Chr3 36054416 G-A 0 0 Single Base Substitution 0 Homo FN2668-S Chr3 8263099 T-C 0 0 Single Base Substitution 0 HET FN2668-S Chr3 9802219 9802221 0 0 Deletion 2 HET FN2668-S Chr4 19348645 C-T 0 0 Single Base Substitution 0 HET FN2668-S Chr4 2929577 Chr3 20535942 0 Translocation 0 FN2668-S Chr4 35233363 G-A 0 0 Single Base Substitution 0 HET FN2668-S Chr5 20762635 20762649 0 0 Deletion 14 frameshift_variant HET LOC_Os05g34950 cysteine-rich receptor-like protein kinase 6 precursor, putative, expressed FN2668-S Chr5 21245043 21245044 0 0 Deletion 1 HET FN2668-S Chr5 26181041 C-T 0 0 Single Base Substitution 0 HET FN2668-S Chr6 14670930 14670937 0 0 Deletion 7 HET FN2668-S Chr6 17726903 C-G 0 0 Single Base Substitution 0 HET FN2668-S Chr6 20549335 20549336 0 0 Deletion 1 frameshift_variant HET LOC_Os06g35220 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2668-S Chr6 26955323 26955324 0 0 Deletion 1 HET FN2668-S Chr6 9264118 T-G 0 0 Single Base Substitution 0 HET FN2668-S Chr7 21742001 21797000 0 0 Deletion 54999 LOC_Os07g36360 OsFBO19 - F-box and other domain containing protein, expressed FN2668-S Chr7 21742001 21797000 0 0 Deletion 54999 LOC_Os07g36370 OsFBX247 - F-box domain containing protein, expressed FN2668-S Chr7 21742001 21797000 0 0 Deletion 54999 LOC_Os07g36390 PPR repeat containing protein, expressed FN2668-S Chr7 21742001 21797000 0 0 Deletion 54999 LOC_Os07g36400 expressed protein FN2668-S Chr7 21742001 21797000 0 0 Deletion 54999 LOC_Os07g36410 expressed protein FN2668-S Chr7 21742001 21797000 0 0 Deletion 54999 LOC_Os07g36420 proteasome inhibitor-related, putative, expressed FN2668-S Chr7 237306 T-C 0 0 Single Base Substitution 0 HET FN2668-S Chr7 27050739 A-G 0 0 Single Base Substitution 0 HET FN2668-S Chr7 27111278 G-T 0 0 Single Base Substitution 0 STOP_GAINED HET LOC_Os07g45450 expressed protein FN2668-S Chr8 14865817 Chr1 13740753 0 Translocation 0 FN2668-S Chr8 14865817 Chr1 13740753 0 Translocation 0 LOC_Os01g24370 retrotransposon protein, putative, unclassified FN2668-S Chr8 15481145 T-C 0 0 Single Base Substitution 0 HET FN2668-S Chr8 21369106 G-A 0 0 Single Base Substitution 0 HET FN2668-S Chr8 26322774 C-T 0 0 Single Base Substitution 0 Homo FN2668-S Chr8 6156580 Chr3 19048457 0 Translocation 0 LOC_Os03g33300 retrotransposon, putative, centromere-specific, expressed FN2668-S Chr8 6156580 Chr3 19048457 0 Translocation 0 LOC_Os08g10470 histone-lysine N-methyltransferase ASHR2, putative, expressed FN2668-S Chr8 6157001 Chr3 19048457 0 Translocation 0 LOC_Os03g33300 retrotransposon, putative, centromere-specific, expressed FN2668-S Chr8 6157001 Chr3 19048457 0 Translocation 0 LOC_Os08g10470 histone-lysine N-methyltransferase ASHR2, putative, expressed FN2668-S Chr9 12971796 G-A 0 0 Single Base Substitution 0 Homo FN2668-S Chr9 19220275 G-T 0 0 Single Base Substitution 0 HET FN2668-S Chr9 2657136 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os09g04950 retrotransposon protein, putative, unclassified, expressed FN2668-S Chr9 3360730 3360731 0 0 Deletion 1 Homo FN2668-S Chr9 7130343 A-G 0 0 Single Base Substitution 0 HET FN2668-S Chr9 8398262 Chr2 25035292 0 Translocation 0 FN2668-S Chr9 974019 974022 0 0 Deletion 3 HET