FN2673-S Chr1 20013569 A-G 0 0 Single Base Substitution 0 HET FN2673-S Chr1 21867715 G-A 0 0 Single Base Substitution 0 Homo FN2673-S Chr1 22375233 G-T 0 0 Single Base Substitution 0 HET FN2673-S Chr1 22924920 G-A 0 0 Single Base Substitution 0 Homo FN2673-S Chr1 23862903 23863398 0 0 Deletion 495 HET FN2673-S Chr1 33081710 A-G 0 0 Single Base Substitution 0 HET FN2673-S Chr1 37898567 38366886 0 0 Inversion 0 FN2673-S Chr1 37898582 38366905 0 0 Inversion 0 FN2673-S Chr1 38836741 T-A 0 0 Single Base Substitution 0 HET FN2673-S Chr1 4874203 4874204 0 0 Insertion 1 HET FN2673-S Chr1 9644959 C-G 0 0 Single Base Substitution 0 HET FN2673-S Chr10 15469240 Chr2 26917497 0 Translocation 0 FN2673-S Chr10 15469240 Chr2 26917497 0 Translocation 0 LOC_Os02g44460 retrotransposon protein, putative, unclassified, expressed FN2673-S Chr10 15874500 15874503 0 0 Deletion 3 disruptive_inframe_deletion HET LOC_Os10g30530 lectin-like receptor kinase, putative, expressed FN2673-S Chr10 16109107 16109112 0 0 Deletion 5 Homo FN2673-S Chr10 7345299 7345307 0 0 Deletion 8 Homo FN2673-S Chr10 8207628 Chr7 11938715 0 Translocation 0 LOC_Os07g20670 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2673-S Chr10 8207628 Chr7 11938715 0 Translocation 0 LOC_Os10g16460 retrotransposon protein, putative, unclassified, expressed FN2673-S Chr10 9510491 T-C 0 0 Single Base Substitution 0 Homo FN2673-S Chr11 12578428 12578435 0 0 Deletion 7 frameshift_variant Homo LOC_Os11g21910 retrotransposon protein, putative, Ty3-gypsy subclass FN2673-S Chr11 13402258 13600327 0 0 Inversion 0 LOC_Os11g23238 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2673-S Chr11 13402258 13600327 0 0 Inversion 0 LOC_Os11g24000 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2673-S Chr11 1392160 G-T 0 0 Single Base Substitution 0 HET FN2673-S Chr11 15112535 G-T 0 0 Single Base Substitution 0 HET FN2673-S Chr11 18939463 18939464 0 0 Deletion 1 Homo FN2673-S Chr11 19896546 19896567 0 0 Deletion 21 HET FN2673-S Chr11 22950737 G-A 0 0 Single Base Substitution 0 HET FN2673-S Chr11 25350641 A-G 0 0 Single Base Substitution 0 HET FN2673-S Chr11 28591618 28591619 0 0 Deletion 1 HET FN2673-S Chr11 28681757 G-A 0 0 Single Base Substitution 0 HET FN2673-S Chr11 2983758 2983764 0 0 Deletion 6 inframe_deletion Homo LOC_Os11g06234 expressed protein FN2673-S Chr11 3435412 Chr1 30237026 0 Translocation 0 FN2673-S Chr11 4563823 C-T 0 0 Single Base Substitution 0 HET FN2673-S Chr11 4730273 G-A 0 0 Single Base Substitution 0 HET FN2673-S Chr11 5027349 Chr1 3456694 0 Translocation 0 LOC_Os01g07330 expressed protein FN2673-S Chr11 5027349 Chr1 3456694 0 Translocation 0 LOC_Os11g09360 OsFBX398 - F-box domain containing protein, expressed FN2673-S Chr11 6551189 Chr3 21439963 0 Translocation 0 FN2673-S Chr11 6668152 Chr7 958499 0 Translocation 0 FN2673-S Chr11 6668152 Chr7 958499 0 Translocation 0 LOC_Os07g02650 retrotransposon protein, putative, unclassified, expressed FN2673-S Chr11 8352051 T-C 0 0 Single Base Substitution 0 HET FN2673-S Chr12 1019773 T-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g02840 ATCHX, putative, expressed FN2673-S Chr12 16959656 Chr2 611354 0 Translocation 0 FN2673-S Chr12 17227670 C-A 0 0 Single Base Substitution 0 HET FN2673-S Chr12 19090671 Chr10 1076403 0 Translocation 0 LOC_Os12g31710 universal stress protein domain containing protein, putative, expressed FN2673-S Chr12 20000154 Chr2 20513525 0 Translocation 0 FN2673-S Chr12 23803489 Chr3 22076017 0 Translocation 0 LOC_Os03g39680 retrotransposon protein, putative, LINE subclass FN2673-S Chr12 23803489 Chr3 22076017 0 Translocation 0 LOC_Os12g38740 retrotransposon protein, putative, unclassified, expressed FN2673-S Chr12 24279596 Chr2 26313990 0 Translocation 0 FN2673-S Chr12 24279596 Chr2 26313990 0 Translocation 0 LOC_Os02g43594 MSP domain containing protein, putative, expressed FN2673-S Chr12 2966113 Chr2 3277505 0 Translocation 0 LOC_Os12g06230 retrotransposon protein, putative, unclassified, expressed FN2673-S Chr12 6457494 Chr4 2769002 0 Translocation 0 FN2673-S Chr12 8150775 G-A 0 0 Single Base Substitution 0 HET FN2673-S Chr12 9083682 C-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os12g15930 retrotransposon, putative, centromere-specific, expressed FN2673-S Chr12 9762954 9762956 0 0 Deletion 2 Homo FN2673-S Chr12 9955132 Chr1 39125737 0 Translocation 0 FN2673-S Chr2 115824 A-T 0 0 Single Base Substitution 0 HET FN2673-S Chr2 1204777 G-A 0 0 Single Base Substitution 0 HET FN2673-S Chr2 15668934 15668973 0 0 Deletion 39 HET FN2673-S Chr2 16599749 Chr1 19738564 0 Translocation 0 FN2673-S Chr2 192402 G-T 0 0 Single Base Substitution 0 HET FN2673-S Chr2 21085746 G-A 0 0 Single Base Substitution 0 HET FN2673-S Chr2 2377045 Chr1 2332548 0 Translocation 0 FN2673-S Chr2 33207398 T-A 0 0 Single Base Substitution 0 Homo FN2673-S Chr2 34363712 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os02g56170 inositol-1-monophosphatase, putative, expressed FN2673-S Chr2 3504081 G-A 0 0 Single Base Substitution 0 HET FN2673-S Chr2 7579652 T-A 0 0 Single Base Substitution 0 HET FN2673-S Chr2 7980098 G-A 0 0 Single Base Substitution 0 Homo FN2673-S Chr3 11677125 C-T 0 0 Single Base Substitution 0 HET FN2673-S Chr3 12725963 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g22190 expressed protein FN2673-S Chr3 14022876 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g24620 retrotransposon protein, putative, unclassified, expressed FN2673-S Chr3 17122078 C-T 0 0 Single Base Substitution 0 HET FN2673-S Chr3 19046902 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g33300 retrotransposon, putative, centromere-specific, expressed FN2673-S Chr3 19085781 T-C 0 0 Single Base Substitution 0 HET FN2673-S Chr3 19544628 Chr1 9929654 0 Translocation 0 LOC_Os01g17260 transcription factor, putative, expressed FN2673-S Chr3 19544628 Chr1 9929654 0 Translocation 0 LOC_Os03g35326 retrotransposon protein, putative, unclassified, expressed FN2673-S Chr3 22486977 G-C 0 0 Single Base Substitution 0 HET FN2673-S Chr3 23303767 T-C 0 0 Single Base Substitution 0 HET FN2673-S Chr3 26064342 A-T 0 0 Single Base Substitution 0 HET FN2673-S Chr3 27700727 A-T 0 0 Single Base Substitution 0 HET FN2673-S Chr3 28176711 28176713 0 0 Deletion 2 HET FN2673-S Chr3 28718267 Chr1 18688725 0 Translocation 0 FN2673-S Chr3 28718267 Chr1 18688725 0 Translocation 0 LOC_Os01g33960 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2673-S Chr3 28831727 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g50500 PPR repeat domain containing protein, putative, expressed FN2673-S Chr3 29269178 T-A 0 0 Single Base Substitution 0 HET FN2673-S Chr3 29269204 C-T 0 0 Single Base Substitution 0 HET FN2673-S Chr3 32641582 32641584 0 0 Insertion 2 HET FN2673-S Chr3 33274291 A-G 0 0 Single Base Substitution 0 HET FN2673-S Chr3 6211312 T-C 0 0 Single Base Substitution 0 Homo FN2673-S Chr4 12370201 Chr2 25329650 0 Translocation 0 FN2673-S Chr4 12370201 Chr2 25329650 0 Translocation 0 LOC_Os02g42134 ARF GTPase-activating domain-containing protein, putative, expressed FN2673-S Chr4 13082613 G-A 0 0 Single Base Substitution 0 HET FN2673-S Chr4 21589457 G-A 0 0 Single Base Substitution 0 HET FN2673-S Chr4 23677604 C-A 0 0 Single Base Substitution 0 STOP_GAINED HET LOC_Os04g39730 retrotransposon protein, putative, unclassified, expressed FN2673-S Chr4 23695555 G-A 0 0 Single Base Substitution 0 HET FN2673-S Chr4 25756767 Chr1 2816738 0 Translocation 0 FN2673-S Chr4 2594877 2594881 0 0 Deletion 4 frameshift_variant Homo LOC_Os04g05200 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2673-S Chr4 26239678 A-T 0 0 Single Base Substitution 0 Homo FN2673-S Chr4 27248012 Chr2 24373941 0 Translocation 0 FN2673-S Chr4 27248012 Chr2 24373941 0 Translocation 0 LOC_Os02g40260 uncharacterized protein At4g06744 precursor, putative, expressed FN2673-S Chr4 28545761 A-T 0 0 Single Base Substitution 0 HET FN2673-S Chr4 32281557 Chr3 21730919 0 Translocation 0 FN2673-S Chr4 32281557 Chr3 21730919 0 Translocation 0 LOC_Os03g39110 expressed protein FN2673-S Chr4 33216957 G-A 0 0 Single Base Substitution 0 HET FN2673-S Chr4 3694899 3694903 0 0 Insertion 4 frameshift_variant HET LOC_Os04g07060 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2673-S Chr4 5677293 5677297 0 0 Insertion 4 HET FN2673-S Chr4 6624937 C-T 0 0 Single Base Substitution 0 HET FN2673-S Chr5 10236220 11186751 0 0 Inversion 0 FN2673-S Chr5 10236244 11186758 0 0 Inversion 0 FN2673-S Chr5 11506852 G-T 0 0 Single Base Substitution 0 HET FN2673-S Chr5 11565505 11565507 0 0 Deletion 2 Homo FN2673-S Chr5 17284382 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g29870 basic salivary proline-rich protein 3 precursor, putative, expressed FN2673-S Chr5 18221682 T-C 0 0 Single Base Substitution 0 Homo FN2673-S Chr5 19061077 A-G 0 0 Single Base Substitution 0 HET FN2673-S Chr5 19130123 C-T 0 0 Single Base Substitution 0 HET FN2673-S Chr5 20202865 A-G 0 0 Single Base Substitution 0 HET FN2673-S Chr5 22654220 C-T 0 0 Single Base Substitution 0 HET FN2673-S Chr5 3434030 T-C 0 0 Single Base Substitution 0 HET FN2673-S Chr5 4549729 G-A 0 0 Single Base Substitution 0 HET FN2673-S Chr5 5790095 G-T 0 0 Single Base Substitution 0 HET FN2673-S Chr5 7956566 A-G 0 0 Single Base Substitution 0 HET FN2673-S Chr6 10831119 G-A 0 0 Single Base Substitution 0 HET FN2673-S Chr6 13924830 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os06g23820 retrotransposon protein, putative, unclassified, expressed FN2673-S Chr6 15437370 15437371 0 0 Insertion 1 HET FN2673-S Chr6 23042478 Chr3 3707349 0 Translocation 0 FN2673-S Chr6 23042478 Chr3 3707349 0 Translocation 0 LOC_Os03g07270 glycine-rich cell wall protein, putative, expressed FN2673-S Chr6 25969971 25969983 0 0 Deletion 12 Homo FN2673-S Chr6 30235925 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os06g49940 retrotransposon protein, putative, unclassified, expressed FN2673-S Chr6 4273614 Chr3 27840704 0 Translocation 0 FN2673-S Chr6 8810277 8810278 0 0 Insertion 1 HET FN2673-S Chr6 9219394 Chr3 14907255 0 Translocation 0 FN2673-S Chr7 10911001 10937000 0 0 Deletion 25999 LOC_Os07g18450 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2673-S Chr7 10911001 10937000 0 0 Deletion 25999 LOC_Os07g18460 expressed protein FN2673-S Chr7 10911001 10937000 0 0 Deletion 25999 LOC_Os07g18480 hypothetical protein FN2673-S Chr7 10938553 T-A 0 0 Single Base Substitution 0 Homo FN2673-S Chr7 11938655 Chr1 16975542 0 Translocation 0 LOC_Os07g20670 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2673-S Chr7 11938723 Chr2 13600035 0 Translocation 0 LOC_Os07g20670 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2673-S Chr7 12300123 C-T 0 0 Single Base Substitution 0 HET FN2673-S Chr7 12629799 12629828 0 0 Deletion 29 HET FN2673-S Chr7 13573678 Chr5 12627012 0 Translocation 0 LOC_Os05g22314 retrotransposon protein, putative, unclassified, expressed FN2673-S Chr7 13573678 Chr5 12627012 0 Translocation 0 LOC_Os07g23980 retrotransposon protein, putative, unclassified, expressed FN2673-S Chr7 14292636 G-T 0 0 Single Base Substitution 0 HET FN2673-S Chr7 1458235 C-T 0 0 Single Base Substitution 0 Homo FN2673-S Chr7 17052497 Chr1 2773981 0 Translocation 0 FN2673-S Chr7 17052497 Chr1 2773981 0 Translocation 0 LOC_Os01g05800 inner membrane protein, putative, expressed FN2673-S Chr7 21033253 Chr5 26268341 0 Translocation 0 FN2673-S Chr7 22081676 Chr4 16289132 0 Translocation 0 FN2673-S Chr7 28085274 Chr1 15882272 0 Translocation 0 FN2673-S Chr7 316921 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os07g01500 retrotransposon protein, putative, unclassified, expressed FN2673-S Chr7 7882486 7882487 0 0 Insertion 1 HET FN2673-S Chr8 11520560 Chr2 35304210 0 Translocation 0 LOC_Os02g57650 No apical meristem protein, putative, expressed FN2673-S Chr8 11520560 Chr2 35304210 0 Translocation 0 LOC_Os08g19260 expressed protein FN2673-S Chr8 11749591 C-T 0 0 Single Base Substitution 0 Homo FN2673-S Chr8 15765976 Chr3 15248051 0 Translocation 0 FN2673-S Chr8 15765976 Chr3 15248051 0 Translocation 0 LOC_Os03g26704 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2673-S Chr8 18701274 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os08g30400 retrotransposon protein, putative, unclassified, expressed FN2673-S Chr8 20397858 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os08g32890 disease resistance protein RPM1, putative, expressed FN2673-S Chr8 22651596 Chr7 3871170 0 Translocation 0 LOC_Os08g35910 expressed protein FN2673-S Chr8 22803825 Chr7 1478338 0 Translocation 0 FN2673-S Chr8 25376111 A-G 0 0 Single Base Substitution 0 Homo FN2673-S Chr8 25407453 25407454 0 0 Deletion 1 Homo FN2673-S Chr8 4049873 G-A 0 0 Single Base Substitution 0 HET FN2673-S Chr8 4172940 Chr6 7544380 0 Translocation 0 LOC_Os08g07430 expressed protein FN2673-S Chr8 4211352 T-A 0 0 Single Base Substitution 0 HET FN2673-S Chr8 5515735 5515747 0 0 Deletion 12 Homo FN2673-S Chr9 1069589 C-G 0 0 Single Base Substitution 0 HET FN2673-S Chr9 10934374 Chr1 8783442 0 Translocation 0 FN2673-S Chr9 11242411 G-A 0 0 Single Base Substitution 0 HET FN2673-S Chr9 19846048 Chr1 3204859 0 Translocation 0 LOC_Os09g33610 retrotransposon protein, putative, unclassified, expressed FN2673-S Chr9 20294565 Chr1 33161280 0 Translocation 0 FN2673-S Chr9 20806347 21034355 0 0 Inversion 0 FN2673-S Chr9 20806347 21034355 0 0 Inversion 0 LOC_Os09g36450 triosephosphate isomerase, chloroplast precursor, putative, expressed FN2673-S Chr9 20806354 21034366 0 0 Inversion 0 FN2673-S Chr9 20806354 21034366 0 0 Inversion 0 LOC_Os09g36450 triosephosphate isomerase, chloroplast precursor, putative, expressed FN2673-S Chr9 21034729 T-C 0 0 Single Base Substitution 0 HET FN2673-S Chr9 2121420 A-G 0 0 Single Base Substitution 0 HET FN2673-S Chr9 21770867 21770868 0 0 Deletion 1 HET FN2673-S Chr9 22784991 G-T 0 0 Single Base Substitution 0 HET FN2673-S Chr9 6282553 Chr4 5870526 0 Translocation 0 FN2673-S Chr9 8378227 T-C 0 0 Single Base Substitution 0 HET FN2673-S Chr9 9104328 Chr4 17791425 0 Translocation 0 FN2673-S Chr9 9104328 Chr4 17791425 0 Translocation 0 LOC_Os04g29840 expressed protein FN2673-S Chr9 9116870 Chr8 16818357 0 Translocation 0