FN2674-S Chr1 10360688 A-G 0 0 Single Base Substitution 0 HET FN2674-S Chr1 10916085 C-G 0 0 Single Base Substitution 0 HET FN2674-S Chr1 14504111 T-C 0 0 Single Base Substitution 0 HET FN2674-S Chr1 1921904 G-A 0 0 Single Base Substitution 0 HET FN2674-S Chr1 26698001 26720000 0 0 Deletion 21999 LOC_Os01g46810 viral A-type inclusion protein repeat containing protein, expressed FN2674-S Chr1 26698001 26720000 0 0 Deletion 21999 LOC_Os01g46820 expressed protein FN2674-S Chr1 26698001 26720000 0 0 Deletion 21999 LOC_Os01g46830 expressed protein FN2674-S Chr1 26698001 26720000 0 0 Deletion 21999 LOC_Os01g46840 expressed protein FN2674-S Chr1 40848436 T-A 0 0 Single Base Substitution 0 HET FN2674-S Chr1 98467 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os01g01200 retrotransposon protein, putative, unclassified, expressed FN2674-S Chr10 12831647 A-T 0 0 Single Base Substitution 0 HET FN2674-S Chr10 22833945 A-G 0 0 Single Base Substitution 0 HET FN2674-S Chr10 2331590 G-T 0 0 Single Base Substitution 0 HET FN2674-S Chr10 7193805 G-A 0 0 Single Base Substitution 0 HET FN2674-S Chr10 9141060 9441158 0 0 Inversion 0 LOC_Os10g18026 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2674-S Chr10 9141060 9441158 0 0 Inversion 0 LOC_Os10g18610 retrotransposon protein, putative, unclassified, expressed FN2674-S Chr10 9141191 Chr6 2866735 0 Translocation 0 LOC_Os06g06190 uncharacterized protein ycf45, putative, expressed FN2674-S Chr10 9141191 Chr6 2866735 0 Translocation 0 LOC_Os10g18026 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2674-S Chr10 9144256 Chr6 2866719 0 Translocation 0 LOC_Os06g06190 uncharacterized protein ycf45, putative, expressed FN2674-S Chr10 9144256 Chr6 2866719 0 Translocation 0 LOC_Os10g18042 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2674-S Chr10 9318844 T-A 0 0 Single Base Substitution 0 HET FN2674-S Chr11 11179822 G-A 0 0 Single Base Substitution 0 Homo FN2674-S Chr11 13889463 A-T 0 0 Single Base Substitution 0 HET FN2674-S Chr11 14225137 14507472 0 0 Inversion 0 FN2674-S Chr11 14311907 14507467 0 0 Inversion 0 FN2674-S Chr11 3174478 A-G 0 0 Single Base Substitution 0 Homo FN2674-S Chr11 3692363 T-C 0 0 Single Base Substitution 0 HET FN2674-S Chr11 4548519 4548531 0 0 Insertion 12 HET FN2674-S Chr12 12337120 G-A 0 0 Single Base Substitution 0 HET FN2674-S Chr12 15660655 C-G 0 0 Single Base Substitution 0 HET FN2674-S Chr12 17785193 C-T 0 0 Single Base Substitution 0 HET FN2674-S Chr12 7716830 C-T 0 0 Single Base Substitution 0 HET FN2674-S Chr12 8970617 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g15700 retrotransposon protein, putative, unclassified, expressed FN2674-S Chr2 11352805 11352817 0 0 Deletion 12 HET FN2674-S Chr2 14898004 A-G 0 0 Single Base Substitution 0 HET FN2674-S Chr2 16637138 16637141 0 0 Deletion 3 HET FN2674-S Chr2 18075229 G-A 0 0 Single Base Substitution 0 Homo FN2674-S Chr2 21891549 21891554 0 0 Deletion 5 Homo FN2674-S Chr2 22370236 C-A 0 0 Single Base Substitution 0 HET FN2674-S Chr2 22861612 G-T 0 0 Single Base Substitution 0 Homo FN2674-S Chr2 25922001 25976000 0 0 Deletion 53999 LOC_Os02g43050 kinesin motor domain containing protein, expressed FN2674-S Chr2 25922001 25976000 0 0 Deletion 53999 LOC_Os02g43060 retrotransposon protein, putative, Ty1-copia subclass FN2674-S Chr2 25922001 25976000 0 0 Deletion 53999 LOC_Os02g43070 retrotransposon protein, putative, unclassified, expressed FN2674-S Chr2 25922001 25976000 0 0 Deletion 53999 LOC_Os02g43080 PPR repeat domain containing protein, putative, expressed FN2674-S Chr2 25922001 25976000 0 0 Deletion 53999 LOC_Os02g43090 myristoyl-acyl carrier protein thioesterase, chloroplast precursor, putative, expressed FN2674-S Chr2 25922001 25976000 0 0 Deletion 53999 LOC_Os02g43100 expressed protein FN2674-S Chr2 25922001 25976000 0 0 Deletion 53999 LOC_Os02g43110 sodium/calcium exchanger 1 precursor, putative, expressed FN2674-S Chr2 25922001 25976000 0 0 Deletion 53999 LOC_Os02g43120 zinc finger, C3HC4 type domain containing protein, expressed FN2674-S Chr2 25922001 25976000 0 0 Deletion 53999 LOC_Os02g43130 kinesin motor domain containing protein, expressed FN2674-S Chr2 26392004 C-T 0 0 Single Base Substitution 0 Homo FN2674-S Chr3 13003044 G-A 0 0 Single Base Substitution 0 HET FN2674-S Chr3 19144003 G-A 0 0 Single Base Substitution 0 HET FN2674-S Chr3 2177833 G-T 0 0 Single Base Substitution 0 HET FN2674-S Chr3 22821134 C-T 0 0 Single Base Substitution 0 HET FN2674-S Chr3 2288728 C-T 0 0 Single Base Substitution 0 HET FN2674-S Chr3 33783003 A-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g59340 CESA2 - cellulose synthase, expressed FN2674-S Chr3 34648748 A-G 0 0 Single Base Substitution 0 HET FN2674-S Chr3 35268561 A-G 0 0 Single Base Substitution 0 HET FN2674-S Chr3 8167504 G-T 0 0 Single Base Substitution 0 Homo FN2674-S Chr3 9268602 A-T 0 0 Single Base Substitution 0 HET FN2674-S Chr4 13124997 13198939 0 0 Inversion 0 FN2674-S Chr4 13125134 13198945 0 0 Inversion 0 FN2674-S Chr4 1397294 1397300 0 0 Deletion 6 HET FN2674-S Chr4 15149201 A-G 0 0 Single Base Substitution 0 HET FN2674-S Chr4 23708286 23708287 0 0 Deletion 1 Homo FN2674-S Chr4 25480618 C-A 0 0 Single Base Substitution 0 Homo FN2674-S Chr4 34036281 C-A 0 0 Single Base Substitution 0 HET FN2674-S Chr5 12119439 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g20670 retrotransposon protein, putative, Ty1-copia subclass, expressed FN2674-S Chr5 21332272 C-T 0 0 Single Base Substitution 0 Homo FN2674-S Chr5 21522185 C-G 0 0 Single Base Substitution 0 Homo FN2674-S Chr5 569722 G-A 0 0 Single Base Substitution 0 HET FN2674-S Chr5 6127543 Chr3 25791659 0 Translocation 0 LOC_Os03g45690 retrotransposon protein, putative, unclassified FN2674-S Chr5 6127543 Chr3 25791659 0 Translocation 0 LOC_Os05g10970 retrotransposon protein, putative, unclassified FN2674-S Chr6 16775155 16775156 0 0 Deletion 1 frameshift_variant HET LOC_Os06g29350 myosin, putative, expressed FN2674-S Chr6 1814137 T-A 0 0 Single Base Substitution 0 HET FN2674-S Chr6 2234627 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os06g05060 ELF3 protein, putative, expressed FN2674-S Chr7 13576897 13576898 0 0 Insertion 1 frameshift_variant HET LOC_Os07g23980 retrotransposon protein, putative, unclassified, expressed FN2674-S Chr7 14337240 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os07g25100 transposon protein, putative, CACTA, En/Spm sub-class FN2674-S Chr7 15028869 C-T 0 0 Single Base Substitution 0 HET FN2674-S Chr7 18226425 G-A 0 0 Single Base Substitution 0 Homo FN2674-S Chr7 20360964 T-A 0 0 Single Base Substitution 0 HET FN2674-S Chr8 11257077 A-T 0 0 Single Base Substitution 0 HET FN2674-S Chr8 16268085 T-A 0 0 Single Base Substitution 0 HET FN2674-S Chr8 18244174 G-C 0 0 Single Base Substitution 0 HET FN2674-S Chr8 2832273 A-G 0 0 Single Base Substitution 0 Homo FN2674-S Chr8 6410769 G-T 0 0 Single Base Substitution 0 HET FN2674-S Chr8 7013605 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os08g11960 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2674-S Chr8 9290388 T-A 0 0 Single Base Substitution 0 HET FN2674-S Chr8 9973579 T-A 0 0 Single Base Substitution 0 HET FN2674-S Chr8 9973580 T-A 0 0 Single Base Substitution 0 HET FN2674-S Chr9 11087792 T-A 0 0 Single Base Substitution 0 HET FN2674-S Chr9 20078529 20078530 0 0 Insertion 1 HET FN2674-S Chr9 20374600 T-A 0 0 Single Base Substitution 0 HET FN2674-S Chr9 478435 G-T 0 0 Single Base Substitution 0 HET FN2674-S Chr9 5642736 C-T 0 0 Single Base Substitution 0 HET FN2674-S Chr9 7259923 7259924 0 0 Insertion 1 HET