FN2680-S Chr1 15867294 C-T 0 0 Single Base Substitution 0 Homo FN2680-S Chr1 15935279 G-A 0 0 Single Base Substitution 0 HET FN2680-S Chr1 17097946 T-C 0 0 Single Base Substitution 0 Homo FN2680-S Chr1 20323243 A-G 0 0 Single Base Substitution 0 Homo FN2680-S Chr1 25071308 25071312 0 0 Deletion 4 HET FN2680-S Chr1 27817928 28055348 0 0 Inversion 0 FN2680-S Chr1 27817928 28055348 0 0 Inversion 0 LOC_Os01g48900 dynamin-related protein 1A, putative, expressed FN2680-S Chr1 27817942 28055372 0 0 Inversion 0 FN2680-S Chr1 27817942 28055372 0 0 Inversion 0 LOC_Os01g48900 dynamin-related protein 1A, putative, expressed FN2680-S Chr1 28222985 C-A 0 0 Single Base Substitution 0 HET FN2680-S Chr1 28575831 T-C 0 0 Single Base Substitution 0 HET FN2680-S Chr1 29824040 G-A 0 0 Single Base Substitution 0 Homo FN2680-S Chr1 30711493 C-T 0 0 Single Base Substitution 0 Homo FN2680-S Chr1 31737521 G-T 0 0 Single Base Substitution 0 HET FN2680-S Chr1 3537215 3537219 0 0 Deletion 4 Homo FN2680-S Chr1 36704942 C-T 0 0 Single Base Substitution 0 HET FN2680-S Chr1 37336980 T-C 0 0 Single Base Substitution 0 HET FN2680-S Chr1 427401 1050825 0 0 Inversion 0 LOC_Os01g01800 expressed protein FN2680-S Chr1 427401 1050825 0 0 Inversion 0 LOC_Os01g02890 phosphatidylserine synthase, putative, expressed FN2680-S Chr1 427422 1050822 0 0 Inversion 0 LOC_Os01g01800 expressed protein FN2680-S Chr1 427422 1050822 0 0 Inversion 0 LOC_Os01g02890 phosphatidylserine synthase, putative, expressed FN2680-S Chr10 13106822 A-T 0 0 Single Base Substitution 0 HET FN2680-S Chr10 3644733 3644735 0 0 Insertion 2 HET FN2680-S Chr11 1520378 C-T 0 0 Single Base Substitution 0 HET FN2680-S Chr11 17965225 18937354 0 0 Inversion 0 FN2680-S Chr11 17965225 18937354 0 0 Inversion 0 LOC_Os11g32110 auxin response factor, putative, expressed FN2680-S Chr11 17965230 18937352 0 0 Inversion 0 FN2680-S Chr11 17965230 18937352 0 0 Inversion 0 LOC_Os11g32110 auxin response factor, putative, expressed FN2680-S Chr11 24128686 C-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os11g40450 retrotransposon protein, putative, Ty1-copia subclass, expressed FN2680-S Chr11 27442001 27470000 0 0 Deletion 27999 LOC_Os11g45370 expressed protein FN2680-S Chr11 27442001 27470000 0 0 Deletion 27999 LOC_Os11g45380 zinc finger family protein, putative, expressed FN2680-S Chr11 27442001 27470000 0 0 Deletion 27999 LOC_Os11g45390 von Willebrand factor type A domain containing protein, putative, expressed FN2680-S Chr11 29010103 Chr3 31102232 0 Translocation 0 FN2680-S Chr11 8430313 G-A 0 0 Single Base Substitution 0 Homo FN2680-S Chr12 15261759 15261766 0 0 Deletion 7 HET FN2680-S Chr12 18048351 A-G 0 0 Single Base Substitution 0 HET FN2680-S Chr12 18711969 T-G 0 0 Single Base Substitution 0 HET FN2680-S Chr12 20089491 20089501 0 0 Deletion 10 HET FN2680-S Chr12 25696197 C-A 0 0 Single Base Substitution 0 HET FN2680-S Chr12 5290757 G-A 0 0 Single Base Substitution 0 HET FN2680-S Chr12 6645160 A-T 0 0 Single Base Substitution 0 HET FN2680-S Chr2 10286519 10286520 0 0 Deletion 1 HET FN2680-S Chr2 10457985 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os02g18020 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2680-S Chr2 12955740 G-A 0 0 Single Base Substitution 0 HET FN2680-S Chr2 35630086 35630118 0 0 Deletion 32 frameshift_variant&splice_donor_variant&splice_region_variant&intron_variant HET LOC_Os02g58210 jmjC domain containing protein, expressed FN2680-S Chr2 504524 504533 0 0 Deletion 9 HET FN2680-S Chr2 6457470 6457476 0 0 Deletion 6 inframe_deletion HET LOC_Os02g12390 retrotransposon protein, putative, Ty1-copia subclass, expressed FN2680-S Chr3 18952986 18952987 0 0 Deletion 1 HET FN2680-S Chr3 21450590 C-T 0 0 Single Base Substitution 0 HET FN2680-S Chr3 27157516 27157520 0 0 Deletion 4 frameshift_variant Homo LOC_Os03g47820 PINHEAD, putative, expressed FN2680-S Chr3 31244406 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os03g54960 retrotransposon protein, putative, unclassified, expressed FN2680-S Chr3 31244407 C-T 0 0 Single Base Substitution 0 Homo FN2680-S Chr3 34612340 34612341 0 0 Deletion 1 HET FN2680-S Chr4 1233505 A-G 0 0 Single Base Substitution 0 HET FN2680-S Chr4 14592733 14592738 0 0 Insertion 5 HET FN2680-S Chr4 19257021 19257025 0 0 Deletion 4 HET FN2680-S Chr4 28357726 A-G 0 0 Single Base Substitution 0 HET FN2680-S Chr4 32616105 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g54840 DNA-directed RNA polymerase subunit, putative, expressed FN2680-S Chr4 425406 T-A 0 0 Single Base Substitution 0 Homo FN2680-S Chr4 4395225 A-G 0 0 Single Base Substitution 0 HET FN2680-S Chr4 5237902 C-T 0 0 Single Base Substitution 0 HET FN2680-S Chr5 10376563 C-T 0 0 Single Base Substitution 0 HET FN2680-S Chr5 11795382 A-G 0 0 Single Base Substitution 0 HET FN2680-S Chr5 15593647 Chr1 33894387 0 Translocation 0 FN2680-S Chr5 15593647 Chr1 33894387 0 Translocation 0 LOC_Os01g58630 pentatricopeptide repeat, putative, expressed FN2680-S Chr5 15593663 Chr1 33898498 0 Translocation 0 FN2680-S Chr5 15593663 Chr1 33898498 0 Translocation 0 LOC_Os01g58640 nucleotide pyrophosphatase/phosphodiesterase, putative, expressed FN2680-S Chr5 2004108 C-T 0 0 Single Base Substitution 0 Homo FN2680-S Chr5 26062621 T-A 0 0 Single Base Substitution 0 Homo FN2680-S Chr6 12108890 12108896 0 0 Deletion 6 Homo FN2680-S Chr6 21027463 21027477 0 0 Deletion 14 Homo FN2680-S Chr6 22532426 22532427 0 0 Deletion 1 HET FN2680-S Chr6 7323616 G-A 0 0 Single Base Substitution 0 HET FN2680-S Chr7 11730540 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os07g20330 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2680-S Chr7 13015652 Chr6 15326305 0 Translocation 0 LOC_Os06g26190 retrotransposon, putative, centromere-specific FN2680-S Chr7 13015652 Chr6 15326305 0 Translocation 0 LOC_Os07g23070 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2680-S Chr7 13023903 Chr6 15326299 0 Translocation 0 FN2680-S Chr7 13023903 Chr6 15326299 0 Translocation 0 LOC_Os06g26190 retrotransposon, putative, centromere-specific FN2680-S Chr7 13876223 C-G 0 0 Single Base Substitution 0 HET FN2680-S Chr7 16411758 G-A 0 0 Single Base Substitution 0 HET FN2680-S Chr7 22173514 C-G 0 0 Single Base Substitution 0 HET FN2680-S Chr7 5683878 5683879 0 0 Deletion 1 HET FN2680-S Chr7 9963624 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os07g16930 expressed protein FN2680-S Chr8 16350656 G-A 0 0 Single Base Substitution 0 HET FN2680-S Chr8 23908046 A-G 0 0 Single Base Substitution 0 HET FN2680-S Chr8 24321868 A-C 0 0 Single Base Substitution 0 HET FN2680-S Chr8 7186713 C-T 0 0 Single Base Substitution 0 HET FN2680-S Chr9 6944672 T-C 0 0 Single Base Substitution 0 HET FN2680-S Chr9 9725133 C-A 0 0 Single Base Substitution 0 HET