FN2688-S Chr1 11005323 T-C 0 0 Single Base Substitution 0 HET FN2688-S Chr1 15346254 15346330 0 0 Insertion 76 HET FN2688-S Chr1 29549655 G-A 0 0 Single Base Substitution 0 HET FN2688-S Chr1 6111639 C-T 0 0 Single Base Substitution 0 HET FN2688-S Chr1 6665535 G-T 0 0 Single Base Substitution 0 HET FN2688-S Chr1 6665536 A-T 0 0 Single Base Substitution 0 HET FN2688-S Chr1 7987572 T-A 0 0 Single Base Substitution 0 HET FN2688-S Chr10 10198047 10198048 0 0 Deletion 1 frameshift_variant HET LOC_Os10g20280 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2688-S Chr10 21079372 21079374 0 0 Deletion 2 HET FN2688-S Chr10 6759355 C-T 0 0 Single Base Substitution 0 HET FN2688-S Chr10 8667874 8667875 0 0 Insertion 1 HET FN2688-S Chr11 10443931 G-T 0 0 Single Base Substitution 0 HET FN2688-S Chr11 18688138 C-T 0 0 Single Base Substitution 0 Homo FN2688-S Chr11 21514794 A-G 0 0 Single Base Substitution 0 HET FN2688-S Chr11 23740972 Chr7 24849957 0 Translocation 0 FN2688-S Chr11 23740972 Chr7 24849957 0 Translocation 0 LOC_Os07g41470 expressed protein FN2688-S Chr11 27010692 27010693 0 0 Insertion 1 HET FN2688-S Chr11 27879279 Chr6 9219406 0 Translocation 0 FN2688-S Chr11 6995380 Chr6 21780167 0 Translocation 0 FN2688-S Chr12 12002215 12002370 0 0 Deletion 155 HET FN2688-S Chr12 13020779 T-C 0 0 Single Base Substitution 0 HET FN2688-S Chr12 15610995 C-T 0 0 Single Base Substitution 0 HET FN2688-S Chr12 18054767 C-T 0 0 Single Base Substitution 0 HET FN2688-S Chr12 19444018 Chr1 23042539 0 Translocation 0 LOC_Os12g32210 autophagy-related protein 10, putative, expressed FN2688-S Chr12 3486022 A-C 0 0 Single Base Substitution 0 SPLICE_SITE_ACCEPTOR HET LOC_Os12g07110 acyl-CoA synthetase protein, putative, expressed FN2688-S Chr12 696920 696921 0 0 Insertion 1 HET FN2688-S Chr12 7320400 7320923 0 0 Inversion 0 LOC_Os12g13150 expressed protein FN2688-S Chr12 8491701 C-A 0 0 Single Base Substitution 0 HET FN2688-S Chr2 11717785 G-A 0 0 Single Base Substitution 0 Homo FN2688-S Chr2 13341930 13341931 0 0 Deletion 1 HET FN2688-S Chr2 26256423 G-A 0 0 Single Base Substitution 0 HET FN2688-S Chr2 26568590 Chr1 4970615 0 Translocation 0 FN2688-S Chr2 26761782 A-G 0 0 Single Base Substitution 0 HET FN2688-S Chr2 34444415 34444417 0 0 Deletion 2 HET FN2688-S Chr2 360680 360681 0 0 Insertion 1 HET FN2688-S Chr3 12352564 T-A 0 0 Single Base Substitution 0 Homo FN2688-S Chr3 19585369 19585370 0 0 Insertion 1 HET FN2688-S Chr3 25720539 G-A 0 0 Single Base Substitution 0 HET FN2688-S Chr3 29617843 G-A 0 0 Single Base Substitution 0 HET FN2688-S Chr3 30923312 30923383 0 0 Deletion 71 HET FN2688-S Chr3 31311347 C-A 0 0 Single Base Substitution 0 HET FN2688-S Chr4 12066534 C-T 0 0 Single Base Substitution 0 HET FN2688-S Chr4 12529501 12529503 0 0 Insertion 2 HET FN2688-S Chr4 14114256 C-T 0 0 Single Base Substitution 0 Homo FN2688-S Chr4 14642842 C-T 0 0 Single Base Substitution 0 HET FN2688-S Chr4 17067924 T-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g28820 retrotransposon protein, putative, unclassified, expressed FN2688-S Chr4 17067935 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g28820 retrotransposon protein, putative, unclassified, expressed FN2688-S Chr4 20800338 C-G 0 0 Single Base Substitution 0 Homo FN2688-S Chr4 25655565 G-A 0 0 Single Base Substitution 0 HET FN2688-S Chr4 35261571 35261572 0 0 Insertion 1 HET FN2688-S Chr4 35474907 C-A 0 0 Single Base Substitution 0 HET FN2688-S Chr5 10264771 A-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g17840 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2688-S Chr5 10844153 Chr3 25789669 0 Translocation 0 LOC_Os05g18720 retrotransposon protein, putative, unclassified, expressed FN2688-S Chr5 15495404 G-A 0 0 Single Base Substitution 0 Homo FN2688-S Chr5 19884166 G-A 0 0 Single Base Substitution 0 Homo FN2688-S Chr5 25539246 Chr1 40624417 0 Translocation 0 FN2688-S Chr5 27130193 G-A 0 0 Single Base Substitution 0 HET FN2688-S Chr5 27408697 Chr4 28035498 0 Translocation 0 FN2688-S Chr6 15405516 Chr4 31987837 0 Translocation 0 FN2688-S Chr6 15405516 Chr4 31987837 0 Translocation 0 LOC_Os04g53670 expressed protein FN2688-S Chr6 17523889 17523893 0 0 Insertion 4 frameshift_variant&stop_gained HET LOC_Os06g30340 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2688-S Chr6 2603089 C-T 0 0 Single Base Substitution 0 HET FN2688-S Chr6 2887218 A-T 0 0 Single Base Substitution 0 HET FN2688-S Chr7 11735001 11768000 0 0 Deletion 32999 LOC_Os07g20340 heavy metal-associated domain containing protein, expressed FN2688-S Chr7 11735001 11768000 0 0 Deletion 32999 LOC_Os07g20360 retrotransposon protein, putative, unclassified, expressed FN2688-S Chr7 11735001 11768000 0 0 Deletion 32999 LOC_Os07g20370 retrotransposon, putative, centromere-specific, expressed FN2688-S Chr7 27453888 Chr3 2479692 0 Translocation 0 FN2688-S Chr7 27453888 Chr3 2479692 0 Translocation 0 LOC_Os03g05090 transposon protein, putative, unclassified, expressed FN2688-S Chr7 27597848 27597851 0 0 Insertion 3 HET FN2688-S Chr7 27878977 Chr5 15607853 0 Translocation 0 FN2688-S Chr7 3115275 Chr5 24535893 0 Translocation 0 FN2688-S Chr7 5145298 5145301 0 0 Deletion 3 Homo FN2688-S Chr8 11836200 11836201 0 0 Deletion 1 HET FN2688-S Chr8 12013848 Chr3 23147206 0 Translocation 0 LOC_Os03g41624 retrotransposon, putative, centromere-specific, expressed FN2688-S Chr8 12013848 Chr3 23147206 0 Translocation 0 LOC_Os08g20050 retrotransposon, putative, centromere-specific, expressed FN2688-S Chr8 14590418 Chr3 9391820 0 Translocation 0 FN2688-S Chr8 15326567 T-A 0 0 Single Base Substitution 0 HET FN2688-S Chr8 27239057 A-T 0 0 Single Base Substitution 0 HET FN2688-S Chr8 5977028 Chr3 2803169 0 Translocation 0 FN2688-S Chr8 5977028 Chr3 2803169 0 Translocation 0 LOC_Os03g05600 hypothetical protein FN2688-S Chr8 6527176 Chr4 1143568 0 Translocation 0 FN2688-S Chr8 6761547 Chr7 6428309 0 Translocation 0 FN2688-S Chr8 6761547 Chr7 6428309 0 Translocation 0 LOC_Os07g11640 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2688-S Chr8 7852198 7852199 0 0 Insertion 1 HET FN2688-S Chr9 17249912 C-T 0 0 Single Base Substitution 0 HET FN2688-S Chr9 17283211 C-T 0 0 Single Base Substitution 0 HET FN2688-S Chr9 214333 214334 0 0 Insertion 1 frameshift_variant HET LOC_Os09g01250 retrotransposon protein, putative, Ty3-gypsy subclass, expressed