FN2690-S Chr1 12473082 G-C 0 0 Single Base Substitution 0 HET FN2690-S Chr1 14102261 14102262 0 0 Deletion 1 frameshift_variant Homo LOC_Os01g25010 flavonol synthase/flavanone 3-hydroxylase, putative, expressed FN2690-S Chr1 15339933 G-A 0 0 Single Base Substitution 0 Homo FN2690-S Chr1 15339934 A-G 0 0 Single Base Substitution 0 Homo FN2690-S Chr1 19135234 C-T 0 0 Single Base Substitution 0 HET FN2690-S Chr1 9073993 G-A 0 0 Single Base Substitution 0 HET FN2690-S Chr10 6272116 6272126 0 0 Deletion 10 HET FN2690-S Chr11 15013576 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os11g26220 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2690-S Chr11 15016129 A-G 0 0 Single Base Substitution 0 HET FN2690-S Chr11 16636570 T-C 0 0 Single Base Substitution 0 HET FN2690-S Chr11 18461806 G-A 0 0 Single Base Substitution 0 HET FN2690-S Chr11 19400890 C-A 0 0 Single Base Substitution 0 Homo FN2690-S Chr11 21895403 21895404 0 0 Deletion 1 frameshift_variant Homo LOC_Os11g37090 pumilio-family RNA binding repeat domain containing protein, expressed FN2690-S Chr11 22104942 22104947 0 0 Insertion 5 HET FN2690-S Chr11 25527122 25527124 0 0 Deletion 2 HET FN2690-S Chr11 26096576 A-G 0 0 Single Base Substitution 0 HET FN2690-S Chr12 11042992 G-A 0 0 Single Base Substitution 0 HET FN2690-S Chr12 16086580 A-C 0 0 Single Base Substitution 0 HET FN2690-S Chr12 20079118 T-C 0 0 Single Base Substitution 0 HET FN2690-S Chr12 20410301 A-G 0 0 Single Base Substitution 0 HET FN2690-S Chr12 20757637 T-C 0 0 Single Base Substitution 0 HET FN2690-S Chr12 23779796 A-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g38710 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2690-S Chr12 24691399 24691400 0 0 Insertion 1 frameshift_variant&stop_gained HET LOC_Os12g39950 expressed protein FN2690-S Chr12 4386843 Chr2 15425596 0 Translocation 0 FN2690-S Chr12 4386843 Chr2 15425596 0 Translocation 0 LOC_Os02g26270 retrotransposon protein, putative, unclassified, expressed FN2690-S Chr12 5360001 5379000 0 0 Deletion 18999 LOC_Os12g10140 O-methyltransferase, putative, expressed FN2690-S Chr12 5360001 5379000 0 0 Deletion 18999 LOC_Os12g10150 retrotransposon protein, putative, unclassified FN2690-S Chr12 5360001 5379000 0 0 Deletion 18999 LOC_Os12g10160 retrotransposon protein, putative, unclassified, expressed FN2690-S Chr12 5360001 5379000 0 0 Deletion 18999 LOC_Os12g10170 O-methyltransferase, putative, expressed FN2690-S Chr12 5360001 5379000 0 0 Deletion 18999 LOC_Os12g10180 NBS-LRR type disease resistance protein Rps1-k-2, putative, expressed FN2690-S Chr12 9054629 Chr2 33279525 0 Translocation 0 LOC_Os02g54280 retrotransposon protein, putative, unclassified, expressed FN2690-S Chr12 9054629 Chr2 33279525 0 Translocation 0 LOC_Os12g15900 retrotransposon protein, putative, unclassified, expressed FN2690-S Chr2 23452001 23475000 0 0 Deletion 22999 LOC_Os02g38800 26S proteasome non-ATPase regulatory subunit 6, putative, expressed FN2690-S Chr2 23452001 23475000 0 0 Deletion 22999 LOC_Os02g38804 protein phosphatase 2C containing protein, expressed FN2690-S Chr2 23452001 23475000 0 0 Deletion 22999 LOC_Os02g38810 26S proteasome non-ATPase regulatory subunit 6, putative, expressed FN2690-S Chr2 23452001 23475000 0 0 Deletion 22999 LOC_Os02g38820 expressed protein FN2690-S Chr2 23452001 23475000 0 0 Deletion 22999 LOC_Os02g38830 retrotransposon protein, putative, unclassified FN2690-S Chr2 31208867 C-T 0 0 Single Base Substitution 0 Homo FN2690-S Chr2 3320695 C-A 0 0 Single Base Substitution 0 Homo FN2690-S Chr2 35175899 35175900 0 0 Deletion 1 Homo FN2690-S Chr3 10222335 10222338 0 0 Deletion 3 HET FN2690-S Chr3 1724456 C-T 0 0 Single Base Substitution 0 HET FN2690-S Chr3 2553157 C-A 0 0 Single Base Substitution 0 Homo FN2690-S Chr3 34244973 C-T 0 0 Single Base Substitution 0 Homo FN2690-S Chr4 11366089 G-T 0 0 Single Base Substitution 0 HET FN2690-S Chr4 13004766 A-G 0 0 Single Base Substitution 0 HET FN2690-S Chr4 26540214 G-A 0 0 Single Base Substitution 0 HET FN2690-S Chr4 34146918 T-A 0 0 Single Base Substitution 0 HET FN2690-S Chr4 7562937 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g13550 retrotransposon protein, putative, Ty1-copia subclass, expressed FN2690-S Chr5 13717095 Chr1 39001038 0 Translocation 0 LOC_Os01g67210 PPR repeat domain containing protein, putative, expressed FN2690-S Chr5 13717095 Chr1 39001038 0 Translocation 0 LOC_Os05g23860 rab GDP dissociation inhibitor alpha, putative, expressed FN2690-S Chr5 14290285 14290286 0 0 Deletion 1 HET FN2690-S Chr5 14921436 C-T 0 0 Single Base Substitution 0 HET FN2690-S Chr5 17111026 Chr3 23167836 0 Translocation 0 LOC_Os03g41700 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2690-S Chr5 17111026 Chr3 23167836 0 Translocation 0 LOC_Os05g29120 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2690-S Chr5 20398899 C-G 0 0 Single Base Substitution 0 Homo FN2690-S Chr5 20439552 A-C 0 0 Single Base Substitution 0 Homo FN2690-S Chr5 3963570 T-C 0 0 Single Base Substitution 0 Homo FN2690-S Chr5 487070 A-G 0 0 Single Base Substitution 0 HET FN2690-S Chr5 9714345 G-A 0 0 Single Base Substitution 0 HET FN2690-S Chr6 10177690 Chr2 13594359 0 Translocation 0 FN2690-S Chr6 12693574 Chr1 2810071 0 Translocation 0 LOC_Os06g21950 inorganic phosphate transporter, putative, expressed FN2690-S Chr7 10656368 Chr3 19428569 0 Translocation 0 FN2690-S Chr7 1589900 1589902 0 0 Deletion 2 HET FN2690-S Chr7 16575844 T-C 0 0 Single Base Substitution 0 HET FN2690-S Chr7 17647048 Chr6 22526256 0 Translocation 0 FN2690-S Chr7 28705904 C-T 0 0 Single Base Substitution 0 HET FN2690-S Chr8 16382093 T-A 0 0 Single Base Substitution 0 Homo FN2690-S Chr8 4438843 G-A 0 0 Single Base Substitution 0 HET FN2690-S Chr8 7146704 G-A 0 0 Single Base Substitution 0 HET FN2690-S Chr8 7455821 Chr2 16612646 0 Translocation 0 FN2690-S Chr8 9374561 T-C 0 0 Single Base Substitution 0 HET FN2690-S Chr9 15238044 T-A 0 0 Single Base Substitution 0 HET FN2690-S Chr9 18110548 18110550 0 0 Deletion 2 Homo FN2690-S Chr9 4260660 C-A 0 0 Single Base Substitution 0 Homo FN2690-S Chr9 5382456 5382457 0 0 Deletion 1 Homo