FN2692-S-1 Chr1 13580486 13580486 0 0 Insertion 2 INTRON HET FN2692-S-1 Chr1 19910040 19910040 0 0 Insertion 1 upstream_gene_variant HET FN2692-S-1 Chr1 31231075 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN2692-S-1 Chr1 36906781 C-T 0 0 Single Base Substitution 0 INTRON HET FN2692-S-1 Chr1 41506225 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN2692-S-1 Chr1 727322 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN2692-S-1 Chr10 10900447 10900451 0 0 Deletion 4 upstream_gene_variant HET FN2692-S-1 Chr10 6984004 6984004 0 0 Insertion 1 upstream_gene_variant HET FN2692-S-1 Chr11 26050620 A-T 0 0 Single Base Substitution 0 INTRON HET FN2692-S-1 Chr11 2634920 2635250 0 0 Inversion 330 FN2692-S-1 Chr12 23279438 23279438 0 0 Insertion 14 upstream_gene_variant HET FN2692-S-1 Chr12 6536316 Chr6 10737074 0 Translocation 0 FN2692-S-1 Chr12 9280110 G-A 0 0 Single Base Substitution 0 INTRON HET FN2692-S-1 Chr2 28262906 C-T 0 0 Single Base Substitution 0 INTRON HET FN2692-S-1 Chr3 1041139 1041139 0 0 Insertion 16 upstream_gene_variant HET FN2692-S-1 Chr3 1685125 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN2692-S-1 Chr3 18511152 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN2692-S-1 Chr3 35772340 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN2692-S-1 Chr4 20266309 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN2692-S-1 Chr4 23931311 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN2692-S-1 Chr4 26006114 26006118 0 0 Deletion 4 downstream_gene_variant HET FN2692-S-1 Chr4 3210039 3210063 0 0 Deletion 24 upstream_gene_variant HET FN2692-S-1 Chr5 20477001 20964000 0 0 Deletion 486999 LOC_Os05g34540 rab GDP dissociation inhibitor alpha, putative, expressed FN2692-S-1 Chr5 20477001 20964000 0 0 Deletion 486999 LOC_Os05g34550 MLO domain containing protein, putative, expressed FN2692-S-1 Chr5 20477001 20964000 0 0 Deletion 486999 LOC_Os05g34560 expressed protein FN2692-S-1 Chr5 20477001 20964000 0 0 Deletion 486999 LOC_Os05g34570 pentatricopeptide, putative, expressed FN2692-S-1 Chr5 20477001 20964000 0 0 Deletion 486999 LOC_Os05g34580 hypothetical protein FN2692-S-1 Chr5 20477001 20964000 0 0 Deletion 486999 LOC_Os05g34590 conserved hypothetical protein FN2692-S-1 Chr5 20477001 20964000 0 0 Deletion 486999 LOC_Os05g34600 no apical meristem protein, putative, expressed FN2692-S-1 Chr5 20477001 20964000 0 0 Deletion 486999 LOC_Os05g34610 retrotransposon protein, putative, unclassified FN2692-S-1 Chr5 20477001 20964000 0 0 Deletion 486999 LOC_Os05g34620 retrotransposon protein, putative, unclassified, expressed FN2692-S-1 Chr5 20477001 20964000 0 0 Deletion 486999 LOC_Os05g34630 hydrolase, alpha/beta fold family domain containing protein, expressed FN2692-S-1 Chr5 20477001 20964000 0 0 Deletion 486999 LOC_Os05g34640 PHD finger protein, putative, expressed FN2692-S-1 Chr5 20477001 20964000 0 0 Deletion 486999 LOC_Os05g34650 DUF647 domain containing protein, putative, expressed FN2692-S-1 Chr5 20477001 20964000 0 0 Deletion 486999 LOC_Os05g34655 expressed protein FN2692-S-1 Chr5 20477001 20964000 0 0 Deletion 486999 LOC_Os05g34660 expressed protein FN2692-S-1 Chr5 20477001 20964000 0 0 Deletion 486999 LOC_Os05g34670 KH domain containing protein, putative, expressed FN2692-S-1 Chr5 20477001 20964000 0 0 Deletion 486999 LOC_Os05g34680 expressed protein FN2692-S-1 Chr5 20477001 20964000 0 0 Deletion 486999 LOC_Os05g34690 expressed protein FN2692-S-1 Chr5 20477001 20964000 0 0 Deletion 486999 LOC_Os05g34700 GDSL-like lipase/acylhydrolase, putative, expressed FN2692-S-1 Chr5 20477001 20964000 0 0 Deletion 486999 LOC_Os05g34710 expressed protein FN2692-S-1 Chr5 20477001 20964000 0 0 Deletion 486999 LOC_Os05g34720 transcriptional regulator, putative, expressed FN2692-S-1 Chr5 20477001 20964000 0 0 Deletion 486999 LOC_Os05g34730 ethylene-responsive transcription factor ERF020, putative, expressed FN2692-S-1 Chr5 20477001 20964000 0 0 Deletion 486999 LOC_Os05g34740 expressed protein FN2692-S-1 Chr5 20477001 20964000 0 0 Deletion 486999 LOC_Os05g34750 retrotransposon protein, putative, Ty1-copia subclass, expressed FN2692-S-1 Chr5 20477001 20964000 0 0 Deletion 486999 LOC_Os05g34760 expressed protein FN2692-S-1 Chr5 20477001 20964000 0 0 Deletion 486999 LOC_Os05g34770 cytochrome c, putative, expressed FN2692-S-1 Chr5 20477001 20964000 0 0 Deletion 486999 LOC_Os05g34780 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2692-S-1 Chr5 20477001 20964000 0 0 Deletion 486999 LOC_Os05g34790 GYF domain containing protein, putative, expressed FN2692-S-1 Chr5 20477001 20964000 0 0 Deletion 486999 LOC_Os05g34800 expressed protein FN2692-S-1 Chr5 20477001 20964000 0 0 Deletion 486999 LOC_Os05g34810 DUF538 domain containing protein, putative, expressed FN2692-S-1 Chr5 20477001 20964000 0 0 Deletion 486999 LOC_Os05g34820 expressed protein FN2692-S-1 Chr5 20477001 20964000 0 0 Deletion 486999 LOC_Os05g34830 No apical meristem protein, putative, expressed FN2692-S-1 Chr5 20477001 20964000 0 0 Deletion 486999 LOC_Os05g34840 expressed protein FN2692-S-1 Chr5 20477001 20964000 0 0 Deletion 486999 LOC_Os05g34854 gibberellin 20 oxidase 2, putative, expressed FN2692-S-1 Chr5 20477001 20964000 0 0 Deletion 486999 LOC_Os05g34870 expressed protein FN2692-S-1 Chr5 20477001 20964000 0 0 Deletion 486999 LOC_Os05g34880 zinc finger, C3HC4 type family protein, expressed FN2692-S-1 Chr5 20477001 20964000 0 0 Deletion 486999 LOC_Os05g34890 expressed protein FN2692-S-1 Chr5 20477001 20964000 0 0 Deletion 486999 LOC_Os05g34900 wound-responsive family protein, putative, expressed FN2692-S-1 Chr5 20477001 20964000 0 0 Deletion 486999 LOC_Os05g34910 expressed protein FN2692-S-1 Chr5 20477001 20964000 0 0 Deletion 486999 LOC_Os05g34914 expressed protein FN2692-S-1 Chr5 20477001 20964000 0 0 Deletion 486999 LOC_Os05g34920 expressed protein FN2692-S-1 Chr5 20477001 20964000 0 0 Deletion 486999 LOC_Os05g34930 hypothetical protein FN2692-S-1 Chr5 20477001 20964000 0 0 Deletion 486999 LOC_Os05g34940 OsMADS4 - MADS-box family gene with MIKCc type-box, expressed FN2692-S-1 Chr5 20477001 20964000 0 0 Deletion 486999 LOC_Os05g34950 cysteine-rich receptor-like protein kinase 6 precursor, putative, expressed FN2692-S-1 Chr5 20477001 20964000 0 0 Deletion 486999 LOC_Os05g34970 expressed protein FN2692-S-1 Chr5 20477001 20964000 0 0 Deletion 486999 LOC_Os05g34980 amino acid transporter, putative, expressed FN2692-S-1 Chr5 20477001 20964000 0 0 Deletion 486999 LOC_Os05g34990 hypothetical protein FN2692-S-1 Chr5 20477001 20964000 0 0 Deletion 486999 LOC_Os05g35000 expressed protein FN2692-S-1 Chr5 20477001 20964000 0 0 Deletion 486999 LOC_Os05g35010 cytochrome P450, putative, expressed FN2692-S-1 Chr5 20477001 20964000 0 0 Deletion 486999 LOC_Os05g35030 hypothetical protein FN2692-S-1 Chr5 20477001 20964000 0 0 Deletion 486999 LOC_Os05g35040 expressed protein FN2692-S-1 Chr5 20477001 20964000 0 0 Deletion 486999 LOC_Os05g35050 ctr copper transporter family protein, putative, expressed FN2692-S-1 Chr5 20477001 20964000 0 0 Deletion 486999 LOC_Os05g35060 DUF803 domain containing, putative, expressed FN2692-S-1 Chr5 20477001 20964000 0 0 Deletion 486999 LOC_Os05g35070 DUF630/DUF632 domains containing protein, putative, expressed FN2692-S-1 Chr5 20477001 20964000 0 0 Deletion 486999 LOC_Os05g35080 expressed protein FN2692-S-1 Chr5 20477001 20964000 0 0 Deletion 486999 LOC_Os05g35090 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2692-S-1 Chr5 20477001 20964000 0 0 Deletion 486999 LOC_Os05g35100 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2692-S-1 Chr5 20477001 20964000 0 0 Deletion 486999 LOC_Os05g35110 OsFBL22 - F-box domain and LRR containing protein, expressed FN2692-S-1 Chr5 20477001 20964000 0 0 Deletion 486999 LOC_Os05g35130 retrotransposon protein, putative, unclassified FN2692-S-1 Chr5 20477001 20964000 0 0 Deletion 486999 LOC_Os05g35140 nodulin MtN3 family protein, putative, expressed FN2692-S-1 Chr5 20477001 20964000 0 0 Deletion 486999 LOC_Os05g35150 expressed protein FN2692-S-1 Chr5 20477001 20964000 0 0 Deletion 486999 LOC_Os05g35160 clathrin assembly protein, putative, expressed FN2692-S-1 Chr5 20477001 20964000 0 0 Deletion 486999 LOC_Os05g35170 no apical meristem protein, putative, expressed FN2692-S-1 Chr5 20477001 20964000 0 0 Deletion 486999 LOC_Os05g35180 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2692-S-1 Chr5 20477001 20964000 0 0 Deletion 486999 LOC_Os05g35190 powdery mildew resistant protein 5, putative, expressed FN2692-S-1 Chr5 20477001 20964000 0 0 Deletion 486999 LOC_Os05g35200 glycosyl transferase, putative, expressed FN2692-S-1 Chr5 20477001 20964000 0 0 Deletion 486999 LOC_Os05g35210 hypothetical protein FN2692-S-1 Chr5 20477001 20964000 0 0 Deletion 486999 LOC_Os05g35220 hypothetical protein FN2692-S-1 Chr5 20477001 20964000 0 0 Deletion 486999 LOC_Os05g35230 expressed protein FN2692-S-1 Chr5 20477001 20964000 0 0 Deletion 486999 LOC_Os05g35240 expressed protein FN2692-S-1 Chr5 20477001 20964000 0 0 Deletion 486999 LOC_Os05g35250 expressed protein FN2692-S-1 Chr5 20477001 20964000 0 0 Deletion 486999 LOC_Os05g35260 PB1 domain containing protein, expressed FN2692-S-1 Chr5 20477001 20964000 0 0 Deletion 486999 LOC_Os05g35266 galactosyltransferase, putative, expressed FN2692-S-1 Chr5 20477001 20964000 0 0 Deletion 486999 LOC_Os05g35274 RNA recognition motif containing protein, putative, expressed FN2692-S-1 Chr5 20477001 20964000 0 0 Deletion 486999 LOC_Os05g35290 phenylalanine ammonia-lyase, putative, expressed FN2692-S-1 Chr5 20477001 20964000 0 0 Deletion 486999 LOC_Os05g35300 expressed protein FN2692-S-1 Chr5 21362103 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN2692-S-1 Chr5 21632001 21662000 0 0 Deletion 29999 LOC_Os05g37030 expressed protein FN2692-S-1 Chr5 21632001 21662000 0 0 Deletion 29999 LOC_Os05g37040 MYB family transcription factor, putative, expressed FN2692-S-1 Chr5 21632001 21662000 0 0 Deletion 29999 LOC_Os05g37050 MYB family transcription factor, putative, expressed FN2692-S-1 Chr5 21632001 21662000 0 0 Deletion 29999 LOC_Os05g37060 MYB family transcription factor, putative, expressed FN2692-S-1 Chr5 21632001 21662000 0 0 Deletion 29999 LOC_Os05g37070 retrotransposon protein, putative, Ty1-copia subclass, expressed FN2692-S-1 Chr5 9870528 Chr4 15936362 0 Translocation 0 FN2692-S-1 Chr6 11098499 11098499 0 0 Insertion 1 upstream_gene_variant HET FN2692-S-1 Chr6 18851513 18851515 0 0 Deletion 2 downstream_gene_variant HET FN2692-S-1 Chr7 16671841 16671841 0 0 Insertion 2 upstream_gene_variant HET FN2692-S-1 Chr7 19796979 19796980 0 0 Deletion 1 frameshift_variant HET LOC_Os07g33150 retrotransposon protein, putative, unclassified, expressed FN2692-S-1 Chr7 9873810 9873825 0 0 Deletion 15 disruptive_inframe_deletion HET LOC_Os07g16810 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2692-S-1 Chr8 16267836 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN2692-S-1 Chr8 1899404 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN2692-S-1 Chr8 20436645 20436647 0 0 Deletion 2 intergenic_region HET FN2692-S-1 Chr8 449672 772212 0 0 Inversion 322540 LOC_Os08g01740 VHS and GAT domain containing protein, expressed FN2692-S-1 Chr8 449674 772211 0 0 Inversion 322537 LOC_Os08g01740 VHS and GAT domain containing protein, expressed FN2692-S-1 Chr8 4877491 G-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os08g08460 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2692-S-1 Chr9 135001 162000 0 0 Deletion 26999 LOC_Os09g01134 expressed protein FN2692-S-1 Chr9 135001 162000 0 0 Deletion 26999 LOC_Os09g01140 expressed protein FN2692-S-1 Chr9 135001 162000 0 0 Deletion 26999 LOC_Os09g01150 retrotransposon protein, putative, Ty3-gypsy subclass FN2692-S-1 Chr9 135001 162000 0 0 Deletion 26999 LOC_Os09g01940 expressed protein FN2692-S-1 Chr9 13943001 13981000 0 0 Deletion 37999 LOC_Os09g23480 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2692-S-1 Chr9 13943001 13981000 0 0 Deletion 37999 LOC_Os09g23490 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2692-S-1 Chr9 13943001 13981000 0 0 Deletion 37999 LOC_Os09g23500 hypothetical protein FN2692-S-1 Chr9 13943001 13981000 0 0 Deletion 37999 LOC_Os09g23510 hypothetical protein FN2692-S-1 Chr9 13943001 13981000 0 0 Deletion 37999 LOC_Os09g27490 expressed protein FN2692-S-1 Chr9 38001 125000 0 0 Deletion 86999 LOC_Os09g01006 retrotransposon protein, putative, unclassified, expressed FN2692-S-1 Chr9 38001 125000 0 0 Deletion 86999 LOC_Os09g01010 retrotransposon protein, putative, unclassified FN2692-S-1 Chr9 38001 125000 0 0 Deletion 86999 LOC_Os09g01020 retrotransposon protein, putative, unclassified, expressed FN2692-S-1 Chr9 38001 125000 0 0 Deletion 86999 LOC_Os09g01030 retrotransposon protein, putative, unclassified, expressed FN2692-S-1 Chr9 38001 125000 0 0 Deletion 86999 LOC_Os09g01040 retrotransposon protein, putative, unclassified, expressed FN2692-S-1 Chr9 38001 125000 0 0 Deletion 86999 LOC_Os09g01050 retrotransposon protein, putative, Ty3-gypsy subclass FN2692-S-1 Chr9 38001 125000 0 0 Deletion 86999 LOC_Os09g01060 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2692-S-1 Chr9 38001 125000 0 0 Deletion 86999 LOC_Os09g01070 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2692-S-1 Chr9 38001 125000 0 0 Deletion 86999 LOC_Os09g01080 retrotransposon protein, putative, unclassified, expressed FN2692-S-1 Chr9 38001 125000 0 0 Deletion 86999 LOC_Os09g01090 retrotransposon protein, putative, unclassified, expressed FN2692-S-1 Chr9 38001 125000 0 0 Deletion 86999 LOC_Os09g01100 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2692-S-1 Chr9 38001 125000 0 0 Deletion 86999 LOC_Os09g01110 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2692-S-1 Chr9 38001 125000 0 0 Deletion 86999 LOC_Os09g01130 retrotransposon protein, putative, unclassified, expressed FN2692-S-1 Chr9 4455849 C-G 0 0 Single Base Substitution 0 INTRON HET FN2692-S-1 Chr9 625001 645000 0 0 Deletion 19999 LOC_Os09g01950 expressed protein FN2692-S-1 Chr9 625001 645000 0 0 Deletion 19999 LOC_Os09g09980 glucan endo-1,3-beta-glucosidase precursor, putative, expressed