FN2696-S Chr1 13907033 C-A 0 0 Single Base Substitution 0 HET FN2696-S Chr1 19177014 T-C 0 0 Single Base Substitution 0 HET FN2696-S Chr1 20113792 C-T 0 0 Single Base Substitution 0 Homo FN2696-S Chr1 24395283 G-T 0 0 Single Base Substitution 0 HET FN2696-S Chr1 25028924 A-T 0 0 Single Base Substitution 0 HET FN2696-S Chr1 32729826 C-A 0 0 Single Base Substitution 0 HET FN2696-S Chr1 38039606 38039620 0 0 Deletion 14 HET FN2696-S Chr1 42111458 G-T 0 0 Single Base Substitution 0 Homo FN2696-S Chr1 6977697 6977698 0 0 Deletion 1 HET FN2696-S Chr10 1097086 1097088 0 0 Deletion 2 HET FN2696-S Chr10 12101135 G-A 0 0 Single Base Substitution 0 HET FN2696-S Chr10 13147824 A-G 0 0 Single Base Substitution 0 HET FN2696-S Chr10 15261004 15261007 0 0 Deletion 3 HET FN2696-S Chr10 20202369 20202395 0 0 Deletion 26 HET FN2696-S Chr10 20842364 C-A 0 0 Single Base Substitution 0 HET FN2696-S Chr10 21433719 G-A 0 0 Single Base Substitution 0 HET FN2696-S Chr10 5184816 C-T 0 0 Single Base Substitution 0 HET FN2696-S Chr10 5712533 5712534 0 0 Deletion 1 HET FN2696-S Chr10 6532447 G-C 0 0 Single Base Substitution 0 HET FN2696-S Chr10 7352155 C-T 0 0 Single Base Substitution 0 HET FN2696-S Chr10 8253274 8253275 0 0 Deletion 1 HET FN2696-S Chr10 9901085 9901087 0 0 Deletion 2 HET FN2696-S Chr11 10767001 10796000 0 0 Deletion 28999 LOC_Os11g18940 WW domain containing protein, expressed FN2696-S Chr11 10767001 10796000 0 0 Deletion 28999 LOC_Os11g18947 zinc finger, C3HC4 type domain containing protein, expressed FN2696-S Chr11 10923621 C-G 0 0 Single Base Substitution 0 HET FN2696-S Chr11 11151639 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os11g19380 retrotransposon protein, putative, unclassified, expressed FN2696-S Chr11 14180753 14180758 0 0 Deletion 5 frameshift_variant HET LOC_Os11g24880 transposon protein, putative, CACTA, En/Spm sub-class FN2696-S Chr11 16486271 16486274 0 0 Deletion 3 HET FN2696-S Chr11 18635179 T-C 0 0 Single Base Substitution 0 HET FN2696-S Chr11 20614644 T-C 0 0 Single Base Substitution 0 HET FN2696-S Chr11 22839130 C-T 0 0 Single Base Substitution 0 Homo FN2696-S Chr11 23523805 T-A 0 0 Single Base Substitution 0 HET FN2696-S Chr11 9043345 T-A 0 0 Single Base Substitution 0 HET FN2696-S Chr12 1057562 T-C 0 0 Single Base Substitution 0 Homo FN2696-S Chr12 13438572 13438589 0 0 Deletion 17 Homo FN2696-S Chr12 14104488 G-A 0 0 Single Base Substitution 0 HET FN2696-S Chr12 1880528 C-A 0 0 Single Base Substitution 0 HET FN2696-S Chr12 19323116 C-A 0 0 Single Base Substitution 0 HET FN2696-S Chr12 23980895 C-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g38990 transposon protein, putative, unclassified, expressed FN2696-S Chr12 9915303 9954710 0 0 Inversion 0 LOC_Os12g17320 polyprenyl synthetase, putative, expressed FN2696-S Chr12 9915304 9954712 0 0 Inversion 0 LOC_Os12g17320 polyprenyl synthetase, putative, expressed FN2696-S Chr2 26441635 C-T 0 0 Single Base Substitution 0 Homo FN2696-S Chr2 31325573 C-T 0 0 Single Base Substitution 0 Homo FN2696-S Chr2 32487529 32487531 0 0 Insertion 2 HET FN2696-S Chr2 34375954 34375955 0 0 Deletion 1 HET FN2696-S Chr3 12881950 12881953 0 0 Insertion 3 Homo FN2696-S Chr3 19403080 C-T 0 0 Single Base Substitution 0 HET FN2696-S Chr3 19673080 G-A 0 0 Single Base Substitution 0 HET FN2696-S Chr3 32726847 C-T 0 0 Single Base Substitution 0 HET FN2696-S Chr3 35894073 C-A 0 0 Single Base Substitution 0 HET FN2696-S Chr4 16753460 16753461 0 0 Deletion 1 Homo FN2696-S Chr4 18517858 C-T 0 0 Single Base Substitution 0 HET FN2696-S Chr4 20980275 T-G 0 0 Single Base Substitution 0 HET FN2696-S Chr4 21174321 T-C 0 0 Single Base Substitution 0 HET FN2696-S Chr4 2292357 C-T 0 0 Single Base Substitution 0 HET FN2696-S Chr4 23197288 23197290 0 0 Deletion 2 HET FN2696-S Chr4 24208331 A-G 0 0 Single Base Substitution 0 HET FN2696-S Chr4 29283180 C-T 0 0 Single Base Substitution 0 HET FN2696-S Chr4 33123656 T-C 0 0 Single Base Substitution 0 Homo FN2696-S Chr4 7184219 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g13030 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2696-S Chr4 9402747 T-A 0 0 Single Base Substitution 0 HET FN2696-S Chr5 13305800 G-A 0 0 Single Base Substitution 0 HET FN2696-S Chr5 14325195 14325231 0 0 Deletion 36 HET FN2696-S Chr5 18649326 C-T 0 0 Single Base Substitution 0 HET FN2696-S Chr5 2512260 2512277 0 0 Deletion 17 HET FN2696-S Chr5 27600410 C-A 0 0 Single Base Substitution 0 HET FN2696-S Chr6 17232918 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os06g29920 retrotransposon protein, putative, unclassified, expressed FN2696-S Chr6 30198051 T-A 0 0 Single Base Substitution 0 HET FN2696-S Chr6 30624971 T-C 0 0 Single Base Substitution 0 HET FN2696-S Chr6 5146983 G-A 0 0 Single Base Substitution 0 HET FN2696-S Chr6 6250718 C-T 0 0 Single Base Substitution 0 HET FN2696-S Chr6 6382052 A-T 0 0 Single Base Substitution 0 HET FN2696-S Chr6 7112001 7230000 0 0 Deletion 117999 LOC_Os06g12990 tRNA methyltransferase, putative, expressed FN2696-S Chr6 7112001 7230000 0 0 Deletion 117999 LOC_Os06g13000 ankyrin repeat domain-containing protein, chloroplast precursor, putative, expressed FN2696-S Chr6 7112001 7230000 0 0 Deletion 117999 LOC_Os06g13010 retrotransposon protein, putative, unclassified, expressed FN2696-S Chr6 7112001 7230000 0 0 Deletion 117999 LOC_Os06g13020 DNA polymerase lambda, putative, expressed FN2696-S Chr6 7112001 7230000 0 0 Deletion 117999 LOC_Os06g13030 OsLIM - LIM domain protein, putative actin-binding protein and transcription factor, expressed FN2696-S Chr6 7112001 7230000 0 0 Deletion 117999 LOC_Os06g13040 glycosyl hydrolases family 16, putative, expressed FN2696-S Chr6 7112001 7230000 0 0 Deletion 117999 LOC_Os06g13050 peroxidase family protein, expressed FN2696-S Chr6 7112001 7230000 0 0 Deletion 117999 LOC_Os06g13060 heat shock protein DnaJ, putative, expressed FN2696-S Chr6 7112001 7230000 0 0 Deletion 117999 LOC_Os06g13070 hhH-GPD superfamily base excision DNA repair protein, putative, expressed FN2696-S Chr6 7112001 7230000 0 0 Deletion 117999 LOC_Os06g13080 spotted leaf 11, putative, expressed FN2696-S Chr6 7112001 7230000 0 0 Deletion 117999 LOC_Os06g13090 armadillo/beta-catenin repeat family protein, putative, expressed FN2696-S Chr6 7112001 7230000 0 0 Deletion 117999 LOC_Os06g13100 CREG1 precursor, putative, expressed FN2696-S Chr6 7112001 7230000 0 0 Deletion 117999 LOC_Os06g13110 retrotransposon protein, putative, unclassified, expressed FN2696-S Chr6 7112001 7230000 0 0 Deletion 117999 LOC_Os06g13120 expressed protein FN2696-S Chr6 7112001 7230000 0 0 Deletion 117999 LOC_Os06g13130 expressed protein FN2696-S Chr6 7112001 7230000 0 0 Deletion 117999 LOC_Os06g13140 WD domain, G-beta repeat domain containing protein, expressed FN2696-S Chr6 7112001 7230000 0 0 Deletion 117999 LOC_Os06g13150 hypothetical protein FN2696-S Chr6 7112001 7230000 0 0 Deletion 117999 LOC_Os06g13160 viral-response family protein, expressed FN2696-S Chr6 7112001 7230000 0 0 Deletion 117999 LOC_Os06g13170 expressed protein FN2696-S Chr6 7112001 7230000 0 0 Deletion 117999 LOC_Os06g13180 metalloendoproteinase 1 precursor, putative, expressed FN2696-S Chr6 7315505 C-T 0 0 Single Base Substitution 0 HET FN2696-S Chr6 7423001 7471000 0 0 Deletion 47999 LOC_Os06g13480 expressed protein FN2696-S Chr6 7423001 7471000 0 0 Deletion 47999 LOC_Os06g13490 SAM dependent carboxyl methyltransferase domain containing protein, expressed FN2696-S Chr6 7423001 7471000 0 0 Deletion 47999 LOC_Os06g13500 retrotransposon protein, putative, Ty1-copia subclass, expressed FN2696-S Chr6 7423001 7471000 0 0 Deletion 47999 LOC_Os06g13510 SAM dependent carboxyl methyltransferase family protein, putative FN2696-S Chr6 7423001 7471000 0 0 Deletion 47999 LOC_Os06g13520 SAM dependent carboxyl methyltransferase domain containing protein, expressed FN2696-S Chr6 7423001 7471000 0 0 Deletion 47999 LOC_Os06g13530 benzoate carboxyl methyltransferase, putative, expressed FN2696-S Chr6 7423001 7471000 0 0 Deletion 47999 LOC_Os06g13540 retrotransposon protein, putative, unclassified, expressed FN2696-S Chr6 9402720 9403593 0 0 Inversion 0 LOC_Os06g16430 FHA domain containing protein, putative, expressed FN2696-S Chr6 9402854 9403593 0 0 Inversion 0 LOC_Os06g16430 FHA domain containing protein, putative, expressed FN2696-S Chr7 17141775 Chr6 16283195 0 Translocation 0 LOC_Os07g29240 expressed protein FN2696-S Chr7 17999662 G-A 0 0 Single Base Substitution 0 HET FN2696-S Chr7 23019879 G-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os07g38320 retrotransposon protein, putative, Ty3-gypsy subclass FN2696-S Chr7 27542539 A-G 0 0 Single Base Substitution 0 HET FN2696-S Chr7 7456001 7739000 0 0 Deletion 282999 LOC_Os07g13010 ulp1 protease family, C-terminal catalytic domain containing protein, expressed FN2696-S Chr7 7456001 7739000 0 0 Deletion 282999 LOC_Os07g13020 SWIM zinc finger family protein, putative FN2696-S Chr7 7456001 7739000 0 0 Deletion 282999 LOC_Os07g13030 expressed protein FN2696-S Chr7 7456001 7739000 0 0 Deletion 282999 LOC_Os07g13040 expressed protein FN2696-S Chr7 7456001 7739000 0 0 Deletion 282999 LOC_Os07g13050 hypothetical protein FN2696-S Chr7 7456001 7739000 0 0 Deletion 282999 LOC_Os07g13060 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2696-S Chr7 7456001 7739000 0 0 Deletion 282999 LOC_Os07g13070 transposon protein, putative, CACTA, En/Spm sub-class FN2696-S Chr7 7456001 7739000 0 0 Deletion 282999 LOC_Os07g13080 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2696-S Chr7 7456001 7739000 0 0 Deletion 282999 LOC_Os07g13090 expressed protein FN2696-S Chr7 7456001 7739000 0 0 Deletion 282999 LOC_Os07g13100 DNA binding protein, putative, expressed FN2696-S Chr7 7456001 7739000 0 0 Deletion 282999 LOC_Os07g13120 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2696-S Chr7 7456001 7739000 0 0 Deletion 282999 LOC_Os07g13130 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2696-S Chr7 7456001 7739000 0 0 Deletion 282999 LOC_Os07g13140 retrotransposon protein, putative, unclassified, expressed FN2696-S Chr7 7456001 7739000 0 0 Deletion 282999 LOC_Os07g13160 expressed protein FN2696-S Chr7 7456001 7739000 0 0 Deletion 282999 LOC_Os07g13170 AP2 domain containing protein, expressed FN2696-S Chr7 7456001 7739000 0 0 Deletion 282999 LOC_Os07g13180 expressed protein FN2696-S Chr7 7456001 7739000 0 0 Deletion 282999 LOC_Os07g13190 retrotransposon protein, putative, unclassified, expressed FN2696-S Chr7 7456001 7739000 0 0 Deletion 282999 LOC_Os07g13200 retrotransposon protein, putative, unclassified, expressed FN2696-S Chr7 7456001 7739000 0 0 Deletion 282999 LOC_Os07g13210 retrotransposon protein, putative, unclassified, expressed FN2696-S Chr7 7456001 7739000 0 0 Deletion 282999 LOC_Os07g13220 expressed protein FN2696-S Chr7 7456001 7739000 0 0 Deletion 282999 LOC_Os07g13230 eukaryotic initiation factor 5A hypusine, DNA-binding OB fold family protein, expressed FN2696-S Chr7 7456001 7739000 0 0 Deletion 282999 LOC_Os07g13234 expressed protein FN2696-S Chr7 7456001 7739000 0 0 Deletion 282999 LOC_Os07g13240 hypothetical protein FN2696-S Chr7 7456001 7739000 0 0 Deletion 282999 LOC_Os07g13260 dof zinc finger domain containing protein, putative, expressed FN2696-S Chr7 7456001 7739000 0 0 Deletion 282999 LOC_Os07g13270 SNF7 domain containing protein, putative, expressed FN2696-S Chr7 7456001 7739000 0 0 Deletion 282999 LOC_Os07g13280 RNA recognition motif containing protein, putative, expressed FN2696-S Chr7 7456001 7739000 0 0 Deletion 282999 LOC_Os07g13310 RALFL10 - Rapid ALkalinization Factor RALF family protein precursor, putative, expressed FN2696-S Chr7 7456001 7739000 0 0 Deletion 282999 LOC_Os07g13319 hypothetical protein FN2696-S Chr7 7456001 7739000 0 0 Deletion 282999 LOC_Os07g13330 expressed protein FN2696-S Chr7 7456001 7739000 0 0 Deletion 282999 LOC_Os07g13340 retrotransposon protein, putative, unclassified, expressed FN2696-S Chr7 7456001 7739000 0 0 Deletion 282999 LOC_Os07g13350 retrotransposon protein, putative, unclassified, expressed FN2696-S Chr7 7456001 7739000 0 0 Deletion 282999 LOC_Os07g13360 expressed protein FN2696-S Chr7 7456001 7739000 0 0 Deletion 282999 LOC_Os07g13370 expressed protein FN2696-S Chr7 7456001 7739000 0 0 Deletion 282999 LOC_Os07g13380 RALFL11 - Rapid ALkalinization Factor RALF family protein precursor, putative FN2696-S Chr7 7456001 7739000 0 0 Deletion 282999 LOC_Os07g13390 transposon protein, putative, unclassified, expressed FN2696-S Chr7 7456001 7739000 0 0 Deletion 282999 LOC_Os07g13400 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2696-S Chr7 7456001 7739000 0 0 Deletion 282999 LOC_Os07g13420 retrotransposon protein, putative, Ty3-gypsy subclass FN2696-S Chr7 7456001 7739000 0 0 Deletion 282999 LOC_Os07g13430 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2696-S Chr7 7456001 7739000 0 0 Deletion 282999 LOC_Os07g13440 RALFL12 - Rapid ALkalinization Factor RALF family protein precursor, putative, expressed FN2696-S Chr7 7456001 7739000 0 0 Deletion 282999 LOC_Os07g13450 RALFL13 - Rapid ALkalinization Factor RALF family protein precursor, expressed FN2696-S Chr7 7456001 7739000 0 0 Deletion 282999 LOC_Os07g13460 expressed protein FN2696-S Chr7 7456001 7739000 0 0 Deletion 282999 LOC_Os07g13480 expressed protein FN2696-S Chr7 7456001 7739000 0 0 Deletion 282999 LOC_Os07g13490 expressed protein FN2696-S Chr7 7456001 7739000 0 0 Deletion 282999 LOC_Os07g13500 expressed protein FN2696-S Chr7 7456001 7739000 0 0 Deletion 282999 LOC_Os07g13510 retrotransposon, putative, centromere-specific, expressed FN2696-S Chr8 12053810 A-G 0 0 Single Base Substitution 0 Homo FN2696-S Chr8 202429 T-C 0 0 Single Base Substitution 0 HET FN2696-S Chr8 23800145 T-A 0 0 Single Base Substitution 0 HET FN2696-S Chr8 392592 Chr6 9402844 0 Translocation 0 FN2696-S Chr8 392592 Chr6 9402844 0 Translocation 0 LOC_Os06g16430 FHA domain containing protein, putative, expressed FN2696-S Chr8 392593 Chr6 9402735 0 Translocation 0 FN2696-S Chr8 392593 Chr6 9402735 0 Translocation 0 LOC_Os06g16430 FHA domain containing protein, putative, expressed FN2696-S Chr8 7130239 7130240 0 0 Insertion 1 HET FN2696-S Chr8 8418751 G-T 0 0 Single Base Substitution 0 HET FN2696-S Chr9 11044317 T-A 0 0 Single Base Substitution 0 HET FN2696-S Chr9 14289727 G-T 0 0 Single Base Substitution 0 HET FN2696-S Chr9 2332625 2332626 0 0 Deletion 1 HET FN2696-S Chr9 397612 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os09g01560 retrotransposon protein, putative, Ty3-gypsy subclass, expressed