FN2756-S-1 Chr1 10338098 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN2756-S-1 Chr1 11453811 11453811 0 0 Insertion 98 downstream_gene_variant HET FN2756-S-1 Chr1 15888473 15888475 0 0 Deletion 2 INTRON HET FN2756-S-1 Chr1 20513128 20513132 0 0 Deletion 4 intergenic_region HET FN2756-S-1 Chr1 25988202 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN2756-S-1 Chr1 2705820 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN2756-S-1 Chr1 2705821 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN2756-S-1 Chr1 30674377 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN2756-S-1 Chr1 309583 309583 0 0 Insertion 2 UTR_3_PRIME HET FN2756-S-1 Chr1 31780580 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN2756-S-1 Chr1 31829407 A-T 0 0 Single Base Substitution 0 INTRON HET FN2756-S-1 Chr1 31829408 C-T 0 0 Single Base Substitution 0 INTRON HET FN2756-S-1 Chr1 32593026 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN2756-S-1 Chr1 40187573 T-A 0 0 Single Base Substitution 0 INTRON HET FN2756-S-1 Chr1 7232157 7232157 0 0 Insertion 28 downstream_gene_variant HET FN2756-S-1 Chr1 9814606 9814612 0 0 Deletion 6 INTERGENIC HET FN2756-S-1 Chr10 20920804 20920804 0 0 Insertion 14 upstream_gene_variant HET FN2756-S-1 Chr10 21374201 21374201 0 0 Insertion 2 INTERGENIC HET FN2756-S-1 Chr10 2543900 2543900 0 0 Insertion 33 disruptive_inframe_insertion HET LOC_Os10g05190 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2756-S-1 Chr10 2837559 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN2756-S-1 Chr10 6949626 A-G 0 0 Single Base Substitution 0 INTRON HET FN2756-S-1 Chr11 11837190 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN2756-S-1 Chr11 12613191 G-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN2756-S-1 Chr11 12703147 12703160 0 0 Deletion 13 INTRON HOMO FN2756-S-1 Chr11 12928032 12928033 0 0 Deletion 1 INTERGENIC HOMO FN2756-S-1 Chr11 19238521 19238521 0 0 Insertion 10 downstream_gene_variant HET FN2756-S-1 Chr11 23681828 23681833 0 0 Deletion 5 INTERGENIC HOMO FN2756-S-1 Chr11 2561379 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os11g05640 bZIP transcription factor domain containing protein, expressed FN2756-S-1 Chr11 6072187 T-C 0 0 Single Base Substitution 0 INTRON HET FN2756-S-1 Chr12 13234893 T-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN2756-S-1 Chr12 16820291 16820294 0 0 Deletion 3 downstream_gene_variant HET FN2756-S-1 Chr12 18589407 Chr1 25366245 0 Translocation 0 FN2756-S-1 Chr12 19324468 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN2756-S-1 Chr12 23863604 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g38840 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2756-S-1 Chr12 26458989 26458989 0 0 Insertion 3 INTRON HET FN2756-S-1 Chr12 7672677 Chr11 12902997 0 Translocation 0 FN2756-S-1 Chr12 7673491 Chr11 12902991 0 Translocation 0 FN2756-S-1 Chr2 12022759 T-C 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN2756-S-1 Chr2 31657048 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN2756-S-1 Chr2 33050915 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN2756-S-1 Chr2 33660546 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os02g54950 transposon protein, putative, unclassified, expressed FN2756-S-1 Chr2 34571220 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os02g56470 hypothetical protein FN2756-S-1 Chr2 4273579 G-A 0 0 Single Base Substitution 0 INTRON HET FN2756-S-1 Chr2 6145001 6242000 0 0 Deletion 96999 LOC_Os02g11859 expressed protein FN2756-S-1 Chr2 6145001 6242000 0 0 Deletion 96999 LOC_Os02g11870 expressed protein FN2756-S-1 Chr2 6145001 6242000 0 0 Deletion 96999 LOC_Os02g11880 expressed protein FN2756-S-1 Chr2 6145001 6242000 0 0 Deletion 96999 LOC_Os02g11890 syntaxin-related protein, putative, expressed FN2756-S-1 Chr2 6145001 6242000 0 0 Deletion 96999 LOC_Os02g11900 expressed protein FN2756-S-1 Chr2 6145001 6242000 0 0 Deletion 96999 LOC_Os02g11910 hypothetical protein FN2756-S-1 Chr2 6145001 6242000 0 0 Deletion 96999 LOC_Os02g11920 hypothetical protein FN2756-S-1 Chr2 6145001 6242000 0 0 Deletion 96999 LOC_Os02g11930 receptor-like protein kinase precursor, putative, expressed FN2756-S-1 Chr2 6145001 6242000 0 0 Deletion 96999 LOC_Os02g11940 sterol glucosyltransferase, putative, expressed FN2756-S-1 Chr2 6145001 6242000 0 0 Deletion 96999 LOC_Os02g11950 expressed protein FN2756-S-1 Chr2 6145001 6242000 0 0 Deletion 96999 LOC_Os02g11960 ABC transporter, ATP-binding protein, putative, expressed FN2756-S-1 Chr2 6145001 6242000 0 0 Deletion 96999 LOC_Os02g11970 expressed protein FN2756-S-1 Chr2 6145001 6242000 0 0 Deletion 96999 LOC_Os02g11980 receptor-like protein kinase precursor, putative, expressed FN2756-S-1 Chr2 6145001 6242000 0 0 Deletion 96999 LOC_Os02g11990 expressed protein FN2756-S-1 Chr2 6145001 6242000 0 0 Deletion 96999 LOC_Os02g12000 expressed protein FN2756-S-1 Chr2 6145001 6242000 0 0 Deletion 96999 LOC_Os02g12010 receptor-like protein kinase precursor, putative, expressed FN2756-S-1 Chr2 6145001 6242000 0 0 Deletion 96999 LOC_Os02g12020 expressed protein FN2756-S-1 Chr2 6145001 6242000 0 0 Deletion 96999 LOC_Os02g13830 osFTL13 FT-Like13 homologous to Flowering Locus T gene; contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed FN2756-S-1 Chr3 24042829 24042829 0 0 Insertion 29 frameshift_variant HET LOC_Os03g43090 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2756-S-1 Chr3 26574067 26574072 0 0 Deletion 5 INTERGENIC HOMO FN2756-S-1 Chr3 29575658 29575658 0 0 Insertion 1 INTERGENIC HET FN2756-S-1 Chr3 29795429 29795433 0 0 Deletion 4 FRAME_SHIFT HET LOC_Os03g51950 expressed protein FN2756-S-1 Chr3 31761794 C-T 0 0 Single Base Substitution 0 INTRON HET FN2756-S-1 Chr3 32589559 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN2756-S-1 Chr3 3420522 3420522 0 0 Insertion 1 INTRON HET FN2756-S-1 Chr4 1172272 1172272 0 0 Insertion 2 INTERGENIC HET FN2756-S-1 Chr4 12033478 12033486 0 0 Deletion 8 INTERGENIC HET FN2756-S-1 Chr4 1304862 C-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN2756-S-1 Chr4 14605535 C-T 0 0 Single Base Substitution 0 INTRON HET FN2756-S-1 Chr4 18351092 18351092 0 0 Insertion 2 upstream_gene_variant HET FN2756-S-1 Chr4 22634356 22634356 0 0 Insertion 6 upstream_gene_variant HET FN2756-S-1 Chr4 2597452 2597455 0 0 Deletion 3 INTERGENIC HET FN2756-S-1 Chr5 11241548 11241555 0 0 Deletion 7 INTERGENIC HET FN2756-S-1 Chr6 24395000 24395000 0 0 Insertion 4 upstream_gene_variant HET FN2756-S-1 Chr6 5417713 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN2756-S-1 Chr6 6042371 6042373 0 0 Deletion 2 INTRON HET FN2756-S-1 Chr6 7381576 7381586 0 0 Deletion 10 INTERGENIC HOMO FN2756-S-1 Chr6 7944395 7944397 0 0 Deletion 2 INTERGENIC HET FN2756-S-1 Chr7 1051848 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN2756-S-1 Chr7 12378404 12378407 0 0 Deletion 3 CODON_DELETION HOMO LOC_Os07g22160 retrotransposon protein, putative, unclassified, expressed FN2756-S-1 Chr7 12784123 12784150 0 0 Deletion 27 UTR_3_PRIME HOMO FN2756-S-1 Chr7 14334994 14335004 0 0 Deletion 10 INTERGENIC HOMO FN2756-S-1 Chr7 26518228 26518228 0 0 Insertion 12 upstream_gene_variant HET FN2756-S-1 Chr7 2810242 2810242 0 0 Insertion 9 stop_gained&inframe_insertion HET LOC_Os07g05850 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2756-S-1 Chr7 28925081 28925091 0 0 Deletion 10 downstream_gene_variant HET FN2756-S-1 Chr7 3142393 G-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN2756-S-1 Chr7 4811246 4811249 0 0 Deletion 3 INTERGENIC HOMO FN2756-S-1 Chr7 9506528 9506528 0 0 Insertion 2 upstream_gene_variant HET FN2756-S-1 Chr8 2121835 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN2756-S-1 Chr8 24911772 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN2756-S-1 Chr8 626114 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN2756-S-1 Chr8 9743026 9743026 0 0 Insertion 1 downstream_gene_variant HET FN2756-S-1 Chr9 14580019 14580028 0 0 Deletion 9 INTERGENIC HET FN2756-S-1 Chr9 15329755 15329761 0 0 Deletion 6 CODON_DELETION HET LOC_Os09g25550 pentatricopeptide, putative, expressed FN2756-S-1 Chr9 6695802 6695803 0 0 Deletion 1 FRAME_SHIFT HOMO LOC_Os09g11910 transposon protein, putative, CACTA, En/Spm sub-class, expressed