FN2779-S Chr1 14065432 14065437 0 0 Deletion 5 Homo FN2779-S Chr1 15242772 G-T 0 0 Single Base Substitution 0 HET FN2779-S Chr1 17845252 17845253 0 0 Deletion 1 Homo FN2779-S Chr1 20770082 G-T 0 0 Single Base Substitution 0 Homo FN2779-S Chr1 24092928 A-G 0 0 Single Base Substitution 0 HET FN2779-S Chr1 30190846 G-A 0 0 Single Base Substitution 0 STOP_GAINED Homo LOC_Os01g52550 ABC transporter, ATP-binding protein, putative, expressed FN2779-S Chr1 32724523 T-G 0 0 Single Base Substitution 0 HET FN2779-S Chr1 36034607 G-A 0 0 Single Base Substitution 0 HET FN2779-S Chr1 36175115 C-T 0 0 Single Base Substitution 0 HET FN2779-S Chr1 7344686 T-C 0 0 Single Base Substitution 0 Homo FN2779-S Chr10 12183496 G-A 0 0 Single Base Substitution 0 HET FN2779-S Chr10 1808541 G-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os10g03970 retrotransposon protein, putative, unclassified, expressed FN2779-S Chr10 2239005 Chr1 2819544 0 Translocation 0 FN2779-S Chr10 6465425 G-A 0 0 Single Base Substitution 0 HET FN2779-S Chr10 8514752 A-G 0 0 Single Base Substitution 0 HET FN2779-S Chr11 14336747 G-A 0 0 Single Base Substitution 0 HET FN2779-S Chr11 14431665 Chr4 13241674 0 Translocation 0 FN2779-S Chr11 1519707 1519708 0 0 Deletion 1 HET FN2779-S Chr11 25350606 T-C 0 0 Single Base Substitution 0 HET FN2779-S Chr11 5992708 C-A 0 0 Single Base Substitution 0 HET FN2779-S Chr11 7361926 G-A 0 0 Single Base Substitution 0 HET FN2779-S Chr11 9286914 9286920 0 0 Deletion 6 HET FN2779-S Chr12 25760223 25760235 0 0 Deletion 12 HET FN2779-S Chr12 304056 T-A 0 0 Single Base Substitution 0 HET FN2779-S Chr2 13988895 T-C 0 0 Single Base Substitution 0 HET FN2779-S Chr2 2158824 G-A 0 0 Single Base Substitution 0 HET FN2779-S Chr2 26996199 G-C 0 0 Single Base Substitution 0 HET FN2779-S Chr2 33279670 33279676 0 0 Deletion 6 disruptive_inframe_deletion Homo LOC_Os02g54280 retrotransposon protein, putative, unclassified, expressed FN2779-S Chr2 7582994 G-A 0 0 Single Base Substitution 0 HET FN2779-S Chr3 1020105 T-C 0 0 Single Base Substitution 0 HET FN2779-S Chr3 14775108 C-T 0 0 Single Base Substitution 0 HET FN2779-S Chr3 21906487 C-A 0 0 Single Base Substitution 0 HET FN2779-S Chr3 33250362 33250364 0 0 Insertion 2 HET FN2779-S Chr3 9444212 G-T 0 0 Single Base Substitution 0 HET FN2779-S Chr4 10578278 G-T 0 0 Single Base Substitution 0 HET FN2779-S Chr4 16271044 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g27520 retrotransposon protein, putative, unclassified, expressed FN2779-S Chr4 16799161 G-A 0 0 Single Base Substitution 0 HET FN2779-S Chr4 19483655 19483665 0 0 Deletion 10 Homo FN2779-S Chr4 212914 C-T 0 0 Single Base Substitution 0 HET FN2779-S Chr4 21774635 21774636 0 0 Deletion 1 HET FN2779-S Chr4 22548530 T-A 0 0 Single Base Substitution 0 Homo FN2779-S Chr4 26976581 26976583 0 0 Insertion 2 HET FN2779-S Chr4 3002231 G-C 0 0 Single Base Substitution 0 HET FN2779-S Chr4 4680747 T-G 0 0 Single Base Substitution 0 HET FN2779-S Chr4 5814939 A-T 0 0 Single Base Substitution 0 HET FN2779-S Chr4 5901268 G-A 0 0 Single Base Substitution 0 HET FN2779-S Chr4 6084861 C-T 0 0 Single Base Substitution 0 HET FN2779-S Chr4 8934072 G-A 0 0 Single Base Substitution 0 HET FN2779-S Chr5 10619473 C-T 0 0 Single Base Substitution 0 HET FN2779-S Chr5 19237962 19237963 0 0 Deletion 1 frameshift_variant HET LOC_Os05g32850 CBS domain containing protein, expressed FN2779-S Chr5 27146518 C-T 0 0 Single Base Substitution 0 HET FN2779-S Chr5 4437327 G-A 0 0 Single Base Substitution 0 HET FN2779-S Chr5 6658584 6658587 0 0 Deletion 3 HET FN2779-S Chr5 7062692 7062697 0 0 Deletion 5 frameshift_variant HET LOC_Os05g12300 expressed protein FN2779-S Chr5 9129215 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g16140 expressed protein FN2779-S Chr5 9841537 C-T 0 0 Single Base Substitution 0 HET FN2779-S Chr6 12513296 A-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os06g21670 retrotransposon protein, putative, unclassified, expressed FN2779-S Chr7 19633562 G-A 0 0 Single Base Substitution 0 HET FN2779-S Chr8 12887701 A-G 0 0 Single Base Substitution 0 Homo FN2779-S Chr8 15693060 G-A 0 0 Single Base Substitution 0 Homo FN2779-S Chr8 19464426 19464434 0 0 Deletion 8 HET FN2779-S Chr8 2520760 G-A 0 0 Single Base Substitution 0 HET FN2779-S Chr8 326978 T-C 0 0 Single Base Substitution 0 HET FN2779-S Chr9 13341957 13341961 0 0 Deletion 4 frameshift_variant HET LOC_Os09g22030 retrotransposon protein, putative, unclassified, expressed FN2779-S Chr9 13417503 C-T 0 0 Single Base Substitution 0 HET FN2779-S Chr9 14815504 14815505 0 0 Deletion 1 HET FN2779-S Chr9 1774753 2336070 0 0 Inversion 0 FN2779-S Chr9 1775294 2433460 0 0 Inversion 0 FN2779-S Chr9 2336001 2433000 0 0 Deletion 96999 LOC_Os09g04420 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2779-S Chr9 2336001 2433000 0 0 Deletion 96999 LOC_Os09g04430 expressed protein FN2779-S Chr9 2336001 2433000 0 0 Deletion 96999 LOC_Os09g04440 DNA-binding protein, putative, expressed FN2779-S Chr9 2336001 2433000 0 0 Deletion 96999 LOC_Os09g04450 expressed protein FN2779-S Chr9 2336001 2433000 0 0 Deletion 96999 LOC_Os09g04460 retrotransposon protein, putative, unclassified, expressed FN2779-S Chr9 2336001 2433000 0 0 Deletion 96999 LOC_Os09g04470 retrotransposon protein, putative, Ty3-gypsy subclass FN2779-S Chr9 2336001 2433000 0 0 Deletion 96999 LOC_Os09g04480 hypothetical protein FN2779-S Chr9 2336001 2433000 0 0 Deletion 96999 LOC_Os09g04490 inactive receptor kinase At1g27190 precursor, putative, expressed FN2779-S Chr9 2336001 2433000 0 0 Deletion 96999 LOC_Os09g04500 expressed protein FN2779-S Chr9 2336001 2433000 0 0 Deletion 96999 LOC_Os09g04504 expressed protein FN2779-S Chr9 2336001 2433000 0 0 Deletion 96999 LOC_Os09g04508 expressed protein FN2779-S Chr9 2336001 2433000 0 0 Deletion 96999 LOC_Os09g04520 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2779-S Chr9 2336001 2433000 0 0 Deletion 96999 LOC_Os09g04530 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2779-S Chr9 2336001 2433000 0 0 Deletion 96999 LOC_Os09g04540 retrotransposon protein, putative, unclassified, expressed FN2779-S Chr9 2336001 2433000 0 0 Deletion 96999 LOC_Os09g04550 retrotransposon protein, putative, unclassified, expressed FN2779-S Chr9 4670691 T-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os09g08850 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2779-S Chr9 5756671 T-A 0 0 Single Base Substitution 0 HET FN2779-S Chr9 6319420 6319422 0 0 Insertion 2 HET FN2779-S Chr9 6951552 A-T 0 0 Single Base Substitution 0 Homo FN2779-S Chr9 7426853 G-A 0 0 Single Base Substitution 0 HET FN2779-S Chr9 783229 G-A 0 0 Single Base Substitution 0 HET