FN2781-S Chr1 10836186 G-A 0 0 Single Base Substitution 0 HET FN2781-S Chr1 11991041 G-T 0 0 Single Base Substitution 0 HET FN2781-S Chr1 13097391 G-A 0 0 Single Base Substitution 0 HET FN2781-S Chr1 15150457 15150458 0 0 Deletion 1 HET FN2781-S Chr1 18313692 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g33250 retrotransposon protein, putative, Ty3-gypsy subclass FN2781-S Chr1 18355731 G-A 0 0 Single Base Substitution 0 HET FN2781-S Chr1 22206144 G-A 0 0 Single Base Substitution 0 Homo FN2781-S Chr1 22206145 C-A 0 0 Single Base Substitution 0 Homo FN2781-S Chr1 24297818 G-A 0 0 Single Base Substitution 0 HET FN2781-S Chr1 27213181 T-C 0 0 Single Base Substitution 0 HET FN2781-S Chr1 27213185 G-A 0 0 Single Base Substitution 0 HET FN2781-S Chr1 27687661 G-T 0 0 Single Base Substitution 0 Homo FN2781-S Chr1 35769529 A-T 0 0 Single Base Substitution 0 HET FN2781-S Chr1 35769530 A-T 0 0 Single Base Substitution 0 HET FN2781-S Chr1 3654108 T-C 0 0 Single Base Substitution 0 Homo FN2781-S Chr1 3741748 3741751 0 0 Deletion 3 Homo FN2781-S Chr10 10177001 10189000 0 0 Deletion 11999 LOC_Os10g20250 membrane associated DUF588 domain containing protein, putative, expressed FN2781-S Chr10 10177001 10189000 0 0 Deletion 11999 LOC_Os10g20260 CSLF7 - cellulose synthase-like family F; beta1,3;1,4 glucan synthase, expressed FN2781-S Chr10 10189304 Chr4 14595105 0 Translocation 0 FN2781-S Chr10 12171661 C-T 0 0 Single Base Substitution 0 HET FN2781-S Chr10 12452443 Chr7 27239357 0 Translocation 0 LOC_Os07g45620 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2781-S Chr10 12452443 Chr7 27239357 0 Translocation 0 LOC_Os10g24310 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2781-S Chr10 15876262 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os10g30530 lectin-like receptor kinase, putative, expressed FN2781-S Chr10 15876264 C-T 0 0 Single Base Substitution 0 HET FN2781-S Chr10 17095616 17095626 0 0 Deletion 10 frameshift_variant HET LOC_Os10g32640 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2781-S Chr10 18011496 18011515 0 0 Deletion 19 HET FN2781-S Chr10 21518305 G-C 0 0 Single Base Substitution 0 HET FN2781-S Chr10 296661 A-T 0 0 Single Base Substitution 0 HET FN2781-S Chr10 3441925 C-T 0 0 Single Base Substitution 0 HET FN2781-S Chr10 647647 G-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os10g02030 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2781-S Chr11 1471704 T-C 0 0 Single Base Substitution 0 HET FN2781-S Chr11 17403435 17403452 0 0 Deletion 17 frameshift_variant&splice_donor_variant&splice_region_variant&intron_variant Homo LOC_Os11g29945 BNR/Asp-box repeat family protein, putative, expressed FN2781-S Chr11 19307765 A-G 0 0 Single Base Substitution 0 Homo FN2781-S Chr11 19330822 C-T 0 0 Single Base Substitution 0 HET FN2781-S Chr11 19599648 19599652 0 0 Deletion 4 Homo FN2781-S Chr11 19603891 G-A 0 0 Single Base Substitution 0 HET FN2781-S Chr11 23896656 A-T 0 0 Single Base Substitution 0 HET FN2781-S Chr11 24631004 25164189 0 0 Inversion 0 LOC_Os11g41110 transposon protein, putative, Ac/Ds sub-class, expressed FN2781-S Chr11 24631045 25164229 0 0 Inversion 0 LOC_Os11g41110 transposon protein, putative, Ac/Ds sub-class, expressed FN2781-S Chr11 27682494 G-A 0 0 Single Base Substitution 0 HET FN2781-S Chr12 1617182 G-C 0 0 Single Base Substitution 0 HET FN2781-S Chr12 18686678 Chr5 13636098 0 Translocation 0 FN2781-S Chr12 22592485 G-A 0 0 Single Base Substitution 0 HET FN2781-S Chr12 6920294 6920315 0 0 Deletion 21 HET FN2781-S Chr2 10879663 10879669 0 0 Deletion 6 HET FN2781-S Chr2 11644451 C-A 0 0 Single Base Substitution 0 HET FN2781-S Chr2 11866050 11866062 0 0 Deletion 12 HET FN2781-S Chr2 13004294 G-C 0 0 Single Base Substitution 0 HET FN2781-S Chr2 17060839 C-A 0 0 Single Base Substitution 0 HET FN2781-S Chr2 1948097 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os02g04420 expressed protein FN2781-S Chr2 1948098 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os02g04420 expressed protein FN2781-S Chr2 1948102 G-A 0 0 Single Base Substitution 0 HET FN2781-S Chr2 20112780 20112781 0 0 Deletion 1 HET FN2781-S Chr2 2481741 T-G 0 0 Single Base Substitution 0 HET FN2781-S Chr2 30392248 30529266 0 0 Inversion 0 FN2781-S Chr2 30392248 30529266 0 0 Inversion 0 LOC_Os02g49970 ZIM motif family protein, expressed FN2781-S Chr2 30392252 30529265 0 0 Inversion 0 FN2781-S Chr2 30392252 30529265 0 0 Inversion 0 LOC_Os02g49970 ZIM motif family protein, expressed FN2781-S Chr2 31284625 C-T 0 0 Single Base Substitution 0 HET FN2781-S Chr2 31359046 C-T 0 0 Single Base Substitution 0 HET FN2781-S Chr2 32724924 32724926 0 0 Deletion 2 HET FN2781-S Chr2 6926001 6960000 0 0 Deletion 33999 LOC_Os02g13090 expressed protein FN2781-S Chr2 6926001 6960000 0 0 Deletion 33999 LOC_Os02g13100 protein phosphatase 2C, putative, expressed FN2781-S Chr3 15523904 C-T 0 0 Single Base Substitution 0 Homo FN2781-S Chr3 19951681 19951682 0 0 Deletion 1 frameshift_variant HET LOC_Os03g35970 retrotransposon protein, putative, unclassified, expressed FN2781-S Chr3 2651551 2651555 0 0 Deletion 4 Homo FN2781-S Chr3 2660065 2660073 0 0 Deletion 8 HET FN2781-S Chr3 30098407 30098408 0 0 Deletion 1 HET FN2781-S Chr3 3099465 A-T 0 0 Single Base Substitution 0 Homo FN2781-S Chr3 3099467 A-T 0 0 Single Base Substitution 0 Homo FN2781-S Chr3 3099469 C-G 0 0 Single Base Substitution 0 Homo FN2781-S Chr3 31241921 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g54960 retrotransposon protein, putative, unclassified, expressed FN2781-S Chr3 5090404 G-A 0 0 Single Base Substitution 0 Homo FN2781-S Chr3 7563654 G-A 0 0 Single Base Substitution 0 Homo FN2781-S Chr3 8198649 8198652 0 0 Deletion 3 inframe_deletion Homo LOC_Os03g15020 beta-galactosidase precursor, putative, expressed FN2781-S Chr4 15903436 T-G 0 0 Single Base Substitution 0 HET FN2781-S Chr4 16801537 16801538 0 0 Deletion 1 HET FN2781-S Chr4 18175694 18175695 0 0 Deletion 1 HET FN2781-S Chr4 18840180 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g31510 retrotransposon protein, putative, unclassified, expressed FN2781-S Chr4 20277944 C-A 0 0 Single Base Substitution 0 HET FN2781-S Chr4 2412520 G-A 0 0 Single Base Substitution 0 HET FN2781-S Chr4 24468499 C-T 0 0 Single Base Substitution 0 HET FN2781-S Chr4 30391443 G-T 0 0 Single Base Substitution 0 HET FN2781-S Chr4 31690447 T-A 0 0 Single Base Substitution 0 HET FN2781-S Chr4 3865011 C-A 0 0 Single Base Substitution 0 HET FN2781-S Chr4 448497 448515 0 0 Deletion 18 HET FN2781-S Chr4 8019300 C-A 0 0 Single Base Substitution 0 HET FN2781-S Chr5 13565242 A-C 0 0 Single Base Substitution 0 Homo FN2781-S Chr5 20080460 20080474 0 0 Deletion 14 Homo FN2781-S Chr5 20105523 20105529 0 0 Deletion 6 Homo FN2781-S Chr5 5032669 5032675 0 0 Deletion 6 HET FN2781-S Chr5 567094 T-A 0 0 Single Base Substitution 0 HET FN2781-S Chr5 567095 G-A 0 0 Single Base Substitution 0 HET FN2781-S Chr6 10568393 G-A 0 0 Single Base Substitution 0 HET FN2781-S Chr6 19518495 G-A 0 0 Single Base Substitution 0 Homo FN2781-S Chr6 20203526 G-A 0 0 Single Base Substitution 0 HET FN2781-S Chr6 26767404 T-A 0 0 Single Base Substitution 0 Homo FN2781-S Chr7 12108402 C-A 0 0 Single Base Substitution 0 HET FN2781-S Chr7 12516782 G-A 0 0 Single Base Substitution 0 HET FN2781-S Chr7 17710919 G-T 0 0 Single Base Substitution 0 HET FN2781-S Chr7 27769966 Chr1 29676763 0 Translocation 0 FN2781-S Chr7 6077022 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os07g11030 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2781-S Chr7 9497139 C-A 0 0 Single Base Substitution 0 HET FN2781-S Chr8 1018493 1018511 0 0 Deletion 18 HET FN2781-S Chr8 1344407 Chr4 30345387 0 Translocation 0 FN2781-S Chr8 1344416 1446167 0 0 Inversion 0 FN2781-S Chr8 1361488 Chr2 2418050 0 Translocation 0 FN2781-S Chr8 14086287 Chr5 5212205 0 Translocation 0 LOC_Os05g09330 transposon protein, putative, CACTA, En/Spm sub-class FN2781-S Chr8 14086287 Chr5 5212205 0 Translocation 0 LOC_Os08g23330 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2781-S Chr8 2618543 2618547 0 0 Deletion 4 HET FN2781-S Chr8 3686664 3686680 0 0 Deletion 16 frameshift_variant Homo LOC_Os08g06510 zinc finger, C3HC4 type domain containing protein, expressed FN2781-S Chr8 3744851 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os08g06640 stress-induced protein, putative, expressed FN2781-S Chr8 5533356 C-T 0 0 Single Base Substitution 0 HET FN2781-S Chr9 10094933 C-T 0 0 Single Base Substitution 0 HET FN2781-S Chr9 10245726 A-T 0 0 Single Base Substitution 0 HET FN2781-S Chr9 14956831 C-T 0 0 Single Base Substitution 0 HET FN2781-S Chr9 15441555 G-A 0 0 Single Base Substitution 0 HET FN2781-S Chr9 15728607 T-C 0 0 Single Base Substitution 0 HET FN2781-S Chr9 17924429 A-C 0 0 Single Base Substitution 0 HET FN2781-S Chr9 22689733 C-T 0 0 Single Base Substitution 0 HET FN2781-S Chr9 4882231 G-A 0 0 Single Base Substitution 0 HET FN2781-S Chr9 4916918 Chr2 11824568 0 Translocation 0 FN2781-S Chr9 5281311 5281313 0 0 Deletion 2 HET FN2781-S Chr9 8796915 A-G 0 0 Single Base Substitution 0 HET