FN2792-S Chr1 1822144 A-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g04140 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2792-S Chr1 2036054 C-T 0 0 Single Base Substitution 0 HET FN2792-S Chr1 29606179 G-A 0 0 Single Base Substitution 0 HET FN2792-S Chr1 34993044 T-C 0 0 Single Base Substitution 0 HET FN2792-S Chr1 39958105 A-G 0 0 Single Base Substitution 0 HET FN2792-S Chr10 16314018 A-G 0 0 Single Base Substitution 0 Homo FN2792-S Chr10 5419574 G-A 0 0 Single Base Substitution 0 Homo FN2792-S Chr10 7995739 A-C 0 0 Single Base Substitution 0 Homo FN2792-S Chr11 10451920 T-C 0 0 Single Base Substitution 0 HET FN2792-S Chr11 13307981 G-A 0 0 Single Base Substitution 0 HET FN2792-S Chr11 17572506 A-G 0 0 Single Base Substitution 0 HET FN2792-S Chr11 27410360 A-G 0 0 Single Base Substitution 0 HET FN2792-S Chr11 2973399 G-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os11g06220 expressed protein FN2792-S Chr11 5623009 A-G 0 0 Single Base Substitution 0 HET FN2792-S Chr11 9774269 T-C 0 0 Single Base Substitution 0 HET FN2792-S Chr12 19389575 T-A 0 0 Single Base Substitution 0 Homo FN2792-S Chr12 21103264 21103282 0 0 Deletion 18 HET FN2792-S Chr12 21292922 21292926 0 0 Deletion 4 Homo FN2792-S Chr12 22052525 C-G 0 0 Single Base Substitution 0 HET FN2792-S Chr12 8096573 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g14240 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2792-S Chr12 8698672 G-A 0 0 Single Base Substitution 0 HET FN2792-S Chr2 10098818 10098829 0 0 Deletion 11 Homo FN2792-S Chr2 12718861 G-A 0 0 Single Base Substitution 0 HET FN2792-S Chr2 15310379 G-C 0 0 Single Base Substitution 0 HET FN2792-S Chr2 15310389 G-A 0 0 Single Base Substitution 0 HET FN2792-S Chr2 15906306 G-T 0 0 Single Base Substitution 0 HET FN2792-S Chr2 15906307 A-T 0 0 Single Base Substitution 0 HET FN2792-S Chr2 26946745 A-C 0 0 Single Base Substitution 0 HET FN2792-S Chr2 700928 C-A 0 0 Single Base Substitution 0 Homo FN2792-S Chr3 23781548 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g42710 WD-40 repeat family protein, putative, expressed FN2792-S Chr3 45004 45009 0 0 Deletion 5 frameshift_variant Homo LOC_Os03g01060 retrotransposon protein, putative, unclassified, expressed FN2792-S Chr4 12797121 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g22600 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2792-S Chr4 35081797 35081801 0 0 Deletion 4 HET FN2792-S Chr5 10992251 C-T 0 0 Single Base Substitution 0 Homo FN2792-S Chr5 17908519 C-A 0 0 Single Base Substitution 0 HET FN2792-S Chr6 1053898 1053915 0 0 Deletion 17 Homo FN2792-S Chr6 16940315 16940317 0 0 Deletion 2 HET FN2792-S Chr6 28214001 28225000 0 0 Deletion 10999 FN2792-S Chr7 11402161 11402162 0 0 Deletion 1 Homo FN2792-S Chr7 14058242 14058251 0 0 Deletion 9 disruptive_inframe_deletion HET LOC_Os07g24710 retrotransposon protein, putative, unclassified, expressed FN2792-S Chr7 26531689 C-T 0 0 Single Base Substitution 0 HET FN2792-S Chr7 27638279 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os07g46340 methyltransferase, putative, expressed FN2792-S Chr7 4275102 4275132 0 0 Deletion 30 HET FN2792-S Chr7 9915047 10808525 0 0 Inversion 0 LOC_Os07g16860 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2792-S Chr8 11178088 11179083 0 0 Deletion 995 splice_donor_variant&inframe_deletion&splice_region_variant&intron_variant HET LOC_Os08g18730 retrotransposon protein, putative, unclassified, expressed FN2792-S Chr8 26648567 26648569 0 0 Insertion 2 HET FN2792-S Chr8 3154714 T-A 0 0 Single Base Substitution 0 Homo FN2792-S Chr8 4174723 4174724 0 0 Deletion 1 Homo FN2792-S Chr8 9217588 9217599 0 0 Deletion 11 frameshift_variant Homo LOC_Os08g15220 retrotransposon protein, putative, unclassified, expressed FN2792-S Chr9 11321370 C-A 0 0 Single Base Substitution 0 HET FN2792-S Chr9 20896625 20896628 0 0 Deletion 3 splice_acceptor_variant&splice_region_variant&intron_variant HET LOC_Os09g36230 PPR repeat containing protein, expressed FN2792-S Chr9 641127 G-C 0 0 Single Base Substitution 0 HET