FN2882-S Chr1 10777281 10777281 0 0 Insertion 107 upstream_gene_variant HET FN2882-S Chr1 12513187 G-A 0 0 Single Base Substitution 0 INTRON HOMO FN2882-S Chr1 13065733 A-C 0 0 Single Base Substitution 0 INTERGENIC HET FN2882-S Chr1 16405866 16405869 0 0 Deletion 3 INTERGENIC HOMO FN2882-S Chr1 18240313 18240336 0 0 Deletion 23 INTERGENIC HOMO FN2882-S Chr1 21428496 C-G 0 0 Single Base Substitution 0 INTRON HOMO FN2882-S Chr1 38177427 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN2882-S Chr1 9125405 9125406 0 0 Deletion 1 INTERGENIC HOMO FN2882-S Chr10 14997881 C-A 0 0 Single Base Substitution 0 INTRON HOMO FN2882-S Chr10 17277369 G-A 0 0 Single Base Substitution 0 INTRON HOMO FN2882-S Chr10 277168 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN2882-S Chr10 4848461 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN2882-S Chr10 6193388 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN2882-S Chr10 8618910 Chr2 27336528 0 Translocation 0 LOC_Os02g45070 PINHEAD, putative, expressed FN2882-S Chr10 8940054 Chr2 33380386 0 Translocation 0 LOC_Os02g54500 WD40-like, putative, expressed FN2882-S Chr10 8940054 Chr2 33380386 0 Translocation 0 LOC_Os10g17690 NB-ARC domain containing protein, expressed FN2882-S Chr10 8940902 Chr2 33380384 0 Translocation 0 LOC_Os02g54500 WD40-like, putative, expressed FN2882-S Chr11 17194294 Chr8 16610026 0 Translocation 0 FN2882-S Chr11 1907677 1907678 0 0 Deletion 1 intron_variant HET FN2882-S Chr11 24763953 A-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN2882-S Chr11 6602449 Chr8 2455477 0 Translocation 0 LOC_Os11g11890 protein kinase domain containing protein, expressed FN2882-S Chr12 12618997 12618998 0 0 Deletion 1 INTERGENIC HET FN2882-S Chr12 18897996 18898021 0 0 Deletion 25 INTERGENIC HET FN2882-S Chr12 21616413 21616420 0 0 Deletion 7 FRAME_SHIFT HET LOC_Os12g35550 expressed protein FN2882-S Chr12 26029242 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN2882-S Chr12 7868106 T-A 0 0 Single Base Substitution 0 INTRON HET FN2882-S Chr12 8825627 A-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g15460 pentatricopeptide, putative, expressed FN2882-S Chr2 18889713 18889714 0 0 Deletion 1 INTERGENIC HET FN2882-S Chr2 26839347 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN2882-S Chr2 27179001 27362000 0 0 Deletion 182999 LOC_Os02g44890 RNA-binding region RNP-1, putative, expressed FN2882-S Chr2 27179001 27362000 0 0 Deletion 182999 LOC_Os02g44900 expressed protein FN2882-S Chr2 27179001 27362000 0 0 Deletion 182999 LOC_Os02g44910 transmembrane protein, putative, expressed FN2882-S Chr2 27179001 27362000 0 0 Deletion 182999 LOC_Os02g44920 protein kinase domain containing protein, expressed FN2882-S Chr2 27179001 27362000 0 0 Deletion 182999 LOC_Os02g44930 HMG1/2, putative, expressed FN2882-S Chr2 27179001 27362000 0 0 Deletion 182999 LOC_Os02g44940 RALFL8 - Rapid ALkalinization Factor RALF family protein precursor, expressed FN2882-S Chr2 27179001 27362000 0 0 Deletion 182999 LOC_Os02g44950 transposon protein, putative, unclassified FN2882-S Chr2 27179001 27362000 0 0 Deletion 182999 LOC_Os02g44970 expressed protein FN2882-S Chr2 27179001 27362000 0 0 Deletion 182999 LOC_Os02g44975 expressed protein FN2882-S Chr2 27179001 27362000 0 0 Deletion 182999 LOC_Os02g44980 transmembrane amino acid transporter protein, putative, expressed FN2882-S Chr2 27179001 27362000 0 0 Deletion 182999 LOC_Os02g44990 OsFBDUF13 - F-box and DUF domain containing protein, expressed FN2882-S Chr2 27179001 27362000 0 0 Deletion 182999 LOC_Os02g45000 expressed protein FN2882-S Chr2 27179001 27362000 0 0 Deletion 182999 LOC_Os02g45010 ethylene-responsive protein related, putative, expressed FN2882-S Chr2 27179001 27362000 0 0 Deletion 182999 LOC_Os02g45020 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2882-S Chr2 27179001 27362000 0 0 Deletion 182999 LOC_Os02g45030 latency associated nuclear antigen, putative, expressed FN2882-S Chr2 27179001 27362000 0 0 Deletion 182999 LOC_Os02g45040 retrotransposon protein, putative, unclassified, expressed FN2882-S Chr2 27179001 27362000 0 0 Deletion 182999 LOC_Os02g45054 ZOS2-15 - C2H2 zinc finger protein, expressed FN2882-S Chr2 27179001 27362000 0 0 Deletion 182999 LOC_Os02g45070 PINHEAD, putative, expressed FN2882-S Chr2 27179001 27362000 0 0 Deletion 182999 LOC_Os02g45080 MYB family transcription factor, putative, expressed FN2882-S Chr2 27179001 27362000 0 0 Deletion 182999 LOC_Os02g45090 expressed protein FN2882-S Chr2 27179001 27362000 0 0 Deletion 182999 LOC_Os02g45100 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed FN2882-S Chr2 27179001 27362000 0 0 Deletion 182999 LOC_Os02g45110 MT-A70 domain containing protein, expressed FN2882-S Chr2 27179001 27362000 0 0 Deletion 182999 LOC_Os02g45500 expressed protein FN2882-S Chr2 32053141 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os02g52370 armadillo/beta-catenin repeat family protein, putative, expressed FN2882-S Chr2 33294935 G-A 0 0 Single Base Substitution 0 UTR_5_PRIME HOMO FN2882-S Chr2 81524 81525 0 0 Deletion 1 INTRON HOMO FN2882-S Chr2 8607828 8607831 0 0 Deletion 3 CODON_CHANGE_PLUS_CODON_DELETION HOMO LOC_Os02g15390 BED zinc finger family protein, expressed FN2882-S Chr3 13662865 13662873 0 0 Deletion 8 INTERGENIC HOMO FN2882-S Chr3 15430271 15430278 0 0 Deletion 7 downstream_gene_variant HET FN2882-S Chr3 27865085 27867267 0 0 Inversion 2182 FN2882-S Chr3 27865094 27876894 0 0 Inversion 11800 FN2882-S Chr3 29251478 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN2882-S Chr4 1416736 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN2882-S Chr4 1427557 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN2882-S Chr4 1866242 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN2882-S Chr4 1866244 T-G 0 0 Single Base Substitution 0 INTERGENIC HET FN2882-S Chr4 1866246 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN2882-S Chr4 23950107 Chr1 293091 0 Translocation 0 LOC_Os01g01580 expressed protein FN2882-S Chr4 31347973 31347975 0 0 Deletion 2 INTERGENIC HET FN2882-S Chr4 31562917 T-A 0 0 Single Base Substitution 0 UTR_5_PRIME HET FN2882-S Chr4 553645 553651 0 0 Deletion 6 INTERGENIC HET FN2882-S Chr4 855444 855445 0 0 Deletion 1 3_prime_UTR_variant HET FN2882-S Chr5 14348534 14348535 0 0 Deletion 1 downstream_gene_variant HET FN2882-S Chr5 15305393 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN2882-S Chr5 18411801 18411813 0 0 Deletion 12 INTERGENIC HET FN2882-S Chr5 23097425 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g39374 expressed protein FN2882-S Chr5 4597905 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN2882-S Chr5 8832919 8832919 0 0 Insertion 2 downstream_gene_variant HET FN2882-S Chr6 27753523 27993012 0 0 Inversion 239489 FN2882-S Chr6 27753524 27993012 0 0 Inversion 239488 FN2882-S Chr6 28304037 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN2882-S Chr6 28880838 28880839 0 0 Deletion 1 INTERGENIC HET FN2882-S Chr6 7797539 G-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN2882-S Chr7 16490789 C-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN2882-S Chr8 25903981 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN2882-S Chr9 13355074 G-T 0 0 Single Base Substitution 0 SPLICE_SITE_REGION HET FN2882-S Chr9 18492244 18492245 0 0 Deletion 1 FRAME_SHIFT HET LOC_Os09g30380 AP005392-AK108636 - NBS/LRR genes that are S-rich,divergent TIR, divergent NBS, expressed FN2882-S Chr9 21555091 C-A 0 0 Single Base Substitution 0 INTRON HOMO FN2882-S Chr9 8270488 8270495 0 0 Deletion 7 INTERGENIC HET FN2882-S Chr9 9457489 C-T 0 0 Single Base Substitution 0 INTERGENIC HET