FN2885-S Chr1 11453811 11453811 0 0 Insertion 98 downstream_gene_variant HET FN2885-S Chr1 13018313 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN2885-S Chr1 13404952 13404955 0 0 Deletion 3 INTERGENIC HET FN2885-S Chr1 15591771 15591773 0 0 Deletion 2 INTERGENIC HOMO FN2885-S Chr1 16580755 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g29590 retrotransposon protein, putative, unclassified, expressed FN2885-S Chr1 21813055 21813055 0 0 Insertion 85 upstream_gene_variant HET FN2885-S Chr1 27661708 27661716 0 0 Deletion 8 INTRON HET FN2885-S Chr1 34440210 34440222 0 0 Deletion 12 CODON_CHANGE_PLUS_CODON_DELETION HET LOC_Os01g59560 protein kinase domain containing protein, expressed FN2885-S Chr1 35835010 35835017 0 0 Deletion 7 FRAME_SHIFT HET LOC_Os01g61910 KIP1, putative, expressed FN2885-S Chr1 36954603 36954604 0 0 Deletion 1 INTRON HET FN2885-S Chr1 42025462 42025487 0 0 Deletion 25 INTERGENIC HET FN2885-S Chr1 6988151 A-C 0 0 Single Base Substitution 0 INTRON HET FN2885-S Chr10 14414328 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN2885-S Chr10 4527844 4527844 0 0 Insertion 103 downstream_gene_variant HET FN2885-S Chr10 4622001 4743000 0 0 Deletion 120999 LOC_Os10g08540 cytochrome P450, putative, expressed FN2885-S Chr10 4622001 4743000 0 0 Deletion 120999 LOC_Os10g08550 enolase, putative, expressed FN2885-S Chr10 4622001 4743000 0 0 Deletion 120999 LOC_Os10g08560 retrotransposon protein, putative, Ty3-gypsy subclass FN2885-S Chr10 4622001 4743000 0 0 Deletion 120999 LOC_Os10g08570 RNA recognition motif family protein, expressed FN2885-S Chr10 4622001 4743000 0 0 Deletion 120999 LOC_Os10g08580 FAD binding domain of DNA photolyase domain containing protein, expressed FN2885-S Chr10 4622001 4743000 0 0 Deletion 120999 LOC_Os10g08590 expressed protein FN2885-S Chr10 4622001 4743000 0 0 Deletion 120999 LOC_Os10g08599 expressed protein FN2885-S Chr10 4622001 4743000 0 0 Deletion 120999 LOC_Os10g08610 expressed protein FN2885-S Chr10 4622001 4743000 0 0 Deletion 120999 LOC_Os10g08620 chalcone and stilbene synthases, putative, expressed FN2885-S Chr10 4622001 4743000 0 0 Deletion 120999 LOC_Os10g08630 expressed protein FN2885-S Chr10 4622001 4743000 0 0 Deletion 120999 LOC_Os10g08640 expressed protein FN2885-S Chr10 4622001 4743000 0 0 Deletion 120999 LOC_Os10g08650 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2885-S Chr10 4622001 4743000 0 0 Deletion 120999 LOC_Os10g08660 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2885-S Chr10 4622001 4743000 0 0 Deletion 120999 LOC_Os10g08670 chalcone synthase, putative, expressed FN2885-S Chr10 4622001 4743000 0 0 Deletion 120999 LOC_Os10g08680 conserved hypothetical protein FN2885-S Chr10 4622001 4743000 0 0 Deletion 120999 LOC_Os10g08690 retrotransposon protein, putative, unclassified, expressed FN2885-S Chr10 4622001 4743000 0 0 Deletion 120999 LOC_Os10g08696 retrotransposon protein, putative, Ty3-gypsy subclass FN2885-S Chr10 4622001 4743000 0 0 Deletion 120999 LOC_Os10g08702 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2885-S Chr10 4622001 4743000 0 0 Deletion 120999 LOC_Os10g08710 chalcone synthase, putative, expressed FN2885-S Chr10 4622001 4743000 0 0 Deletion 120999 LOC_Os10g08720 hypothetical protein FN2885-S Chr10 4622001 4743000 0 0 Deletion 120999 LOC_Os10g08730 expressed protein FN2885-S Chr10 4622001 4743000 0 0 Deletion 120999 LOC_Os10g08740 retrotransposon protein, putative, Ty1-copia subclass, expressed FN2885-S Chr10 6007258 6007264 0 0 Deletion 6 INTERGENIC HET FN2885-S Chr10 7253186 7253186 0 0 Insertion 2 INTERGENIC HET FN2885-S Chr11 15739419 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN2885-S Chr11 16724959 16724959 0 0 Insertion 6 upstream_gene_variant HET FN2885-S Chr11 20132294 20132311 0 0 Deletion 17 INTRON HET FN2885-S Chr11 21563933 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN2885-S Chr11 22235822 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN2885-S Chr11 24852274 24852287 0 0 Deletion 13 INTRON HOMO FN2885-S Chr11 4819498 G-A 0 0 Single Base Substitution 0 INTRON HET FN2885-S Chr11 5165496 G-A 0 0 Single Base Substitution 0 UTR_3_PRIME HET FN2885-S Chr11 5705102 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN2885-S Chr11 9999908 9999921 0 0 Deletion 13 INTERGENIC HOMO FN2885-S Chr12 12555239 Chr1 1692190 0 Translocation 0 FN2885-S Chr12 15238163 Chr2 10483612 0 Translocation 0 LOC_Os02g18064 expressed protein FN2885-S Chr12 15244369 Chr2 10483434 0 Translocation 0 LOC_Os02g18064 expressed protein FN2885-S Chr12 15881172 15881180 0 0 Deletion 8 FRAME_SHIFT HET LOC_Os12g27096 retrotransposon protein, putative, Ty1-copia subclass, expressed FN2885-S Chr12 2032376 Chr1 41863432 0 Translocation 0 LOC_Os01g72190 expressed protein FN2885-S Chr12 21615320 G-A 0 0 Single Base Substitution 0 INTRON HET FN2885-S Chr12 9728440 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN2885-S Chr2 11030303 11030304 0 0 Deletion 1 INTERGENIC HET FN2885-S Chr2 20090426 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN2885-S Chr2 23539187 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os02g38950 PPR repeat containing protein, expressed FN2885-S Chr2 2422831 G-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN2885-S Chr2 28018398 28018405 0 0 Deletion 7 FRAME_SHIFT HET LOC_Os02g45980 ZR1 protein, putative, expressed FN2885-S Chr2 3913400 3913402 0 0 Deletion 2 FRAME_SHIFT HOMO LOC_Os02g07560 transposon protein, putative, unclassified, expressed FN2885-S Chr2 3996203 3996204 0 0 Deletion 1 FRAME_SHIFT HOMO LOC_Os02g07680 cytochrome P450, putative, expressed FN2885-S Chr2 5979100 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os02g11640 UDP-glucoronosyl and UDP-glucosyl transferase, putative, expressed FN2885-S Chr2 5979103 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN2885-S Chr3 10781447 10781448 0 0 Deletion 1 INTERGENIC HET FN2885-S Chr3 12550076 T-A 0 0 Single Base Substitution 0 INTRON HOMO FN2885-S Chr3 1464969 G-A 0 0 Single Base Substitution 0 INTRON HET FN2885-S Chr3 19681642 19681645 0 0 Deletion 3 upstream_gene_variant HET FN2885-S Chr3 28683435 28683437 0 0 Deletion 2 INTERGENIC HET FN2885-S Chr3 31435133 G-C 0 0 Single Base Substitution 0 INTERGENIC HET FN2885-S Chr3 33157737 33157741 0 0 Deletion 4 INTERGENIC HET FN2885-S Chr3 5180826 A-C 0 0 Single Base Substitution 0 UTR_3_PRIME HET FN2885-S Chr4 1218218 T-G 0 0 Single Base Substitution 0 INTRON HET FN2885-S Chr4 12486009 12486011 0 0 Deletion 2 INTERGENIC HET FN2885-S Chr4 156090 156097 0 0 Deletion 7 INTERGENIC HET FN2885-S Chr4 25979588 25979592 0 0 Deletion 4 INTERGENIC HET FN2885-S Chr4 28593946 28593953 0 0 Deletion 7 INTRON HET FN2885-S Chr4 29736574 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN2885-S Chr4 31684569 31684569 0 0 Insertion 2 INTERGENIC HET FN2885-S Chr4 32622327 32622331 0 0 Deletion 4 INTERGENIC HET FN2885-S Chr4 33957516 33957526 0 0 Deletion 10 INTERGENIC HET FN2885-S Chr4 6670807 6670808 0 0 Deletion 1 upstream_gene_variant HET FN2885-S Chr4 7871808 Chr2 34491837 0 Translocation 0 FN2885-S Chr5 13503610 13503615 0 0 Deletion 5 upstream_gene_variant HET FN2885-S Chr5 16699410 16699414 0 0 Deletion 4 FRAME_SHIFT HET LOC_Os05g28510 importin subunit beta, putative, expressed FN2885-S Chr5 21572118 T-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN2885-S Chr5 2207251 2207256 0 0 Deletion 5 INTRON HOMO FN2885-S Chr5 7555367 T-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN2885-S Chr5 7650592 7650598 0 0 Deletion 6 INTRON HOMO FN2885-S Chr5 8233504 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN2885-S Chr6 11041676 11041683 0 0 Deletion 7 FRAME_SHIFT HET LOC_Os06g19390 expressed protein FN2885-S Chr6 12550132 12550150 0 0 Deletion 18 upstream_gene_variant HET FN2885-S Chr6 14329984 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN2885-S Chr6 19314314 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN2885-S Chr6 27463952 27463959 0 0 Deletion 7 INTERGENIC HET FN2885-S Chr6 4900651 4900651 0 0 Insertion 1 upstream_gene_variant HET FN2885-S Chr6 6994945 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN2885-S Chr7 10420379 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os07g17640 transposon protein, putative, unclassified, expressed FN2885-S Chr7 112525 112539 0 0 Deletion 14 INTERGENIC HET FN2885-S Chr7 11824043 11824044 0 0 Deletion 1 upstream_gene_variant HET FN2885-S Chr7 11878498 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN2885-S Chr7 456654 G-A 0 0 Single Base Substitution 0 INTRON HOMO FN2885-S Chr7 4996468 T-A 0 0 Single Base Substitution 0 INTRON HOMO FN2885-S Chr8 21880396 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN2885-S Chr8 24435829 C-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN2885-S Chr8 24602772 C-T 0 0 Single Base Substitution 0 INTRON HOMO FN2885-S Chr8 25606796 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN2885-S Chr9 1413980 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN2885-S Chr9 14215867 14215867 0 0 Insertion 1 upstream_gene_variant HET FN2885-S Chr9 20213487 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN2885-S Chr9 20728514 G-A 0 0 Single Base Substitution 0 INTERGENIC HET