FN2951-S Chr1 12366264 12512344 0 0 Inversion 146080 LOC_Os01g22010 S-adenosylmethionine synthetase, putative, expressed FN2951-S Chr1 16855373 16855374 0 0 Deletion 1 intergenic_region HET FN2951-S Chr1 24974132 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN2951-S Chr1 25822942 25822990 0 0 Deletion 48 downstream_gene_variant HET FN2951-S Chr1 3433747 A-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g07280 disease resistance protein, putative, expressed FN2951-S Chr1 5932512 C-A 0 0 Single Base Substitution 0 INTRON HET FN2951-S Chr1 6381738 6381742 0 0 Deletion 4 FRAME_SHIFT HET LOC_Os01g11790 GDSL-like lipase/acylhydrolase, putative, expressed FN2951-S Chr1 7232157 7232157 0 0 Insertion 10 downstream_gene_variant HET FN2951-S Chr1 8177047 8177049 0 0 Deletion 2 INTRON HET FN2951-S Chr10 12427593 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN2951-S Chr10 22358169 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN2951-S Chr10 22358170 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN2951-S Chr10 22358960 Chr6 28454356 0 Translocation 0 FN2951-S Chr10 23083175 23083180 0 0 Deletion 5 INTERGENIC HET FN2951-S Chr10 3192187 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN2951-S Chr10 6617679 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN2951-S Chr11 13052102 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN2951-S Chr11 15724983 15724991 0 0 Deletion 8 INTRON HOMO FN2951-S Chr11 8801887 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN2951-S Chr12 16600706 C-G 0 0 Single Base Substitution 0 INTERGENIC HET FN2951-S Chr12 20326729 20326730 0 0 Deletion 1 upstream_gene_variant HET FN2951-S Chr12 26686172 26686182 0 0 Deletion 10 INTERGENIC HOMO FN2951-S Chr2 15626683 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os02g26614 retrotransposon protein, putative, unclassified, expressed FN2951-S Chr2 15911363 G-A 0 0 Single Base Substitution 0 INTRON HET FN2951-S Chr2 19890360 19890402 0 0 Deletion 42 upstream_gene_variant HET FN2951-S Chr2 270161 270170 0 0 Deletion 9 CODON_DELETION HET LOC_Os02g01460 retrotransposon protein, putative, unclassified, expressed FN2951-S Chr2 27088884 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN2951-S Chr2 35271652 G-T 0 0 Single Base Substitution 0 UTR_5_PRIME HET FN2951-S Chr2 35271654 G-T 0 0 Single Base Substitution 0 START_GAINED HET FN2951-S Chr2 6690898 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN2951-S Chr2 7771452 7771452 0 0 Insertion 1 INTERGENIC HET FN2951-S Chr3 11436983 11436984 0 0 Deletion 1 INTERGENIC HET FN2951-S Chr3 23921453 23921471 0 0 Deletion 18 INTERGENIC HET FN2951-S Chr3 24007635 24007636 0 0 Deletion 1 INTERGENIC HET FN2951-S Chr3 25369655 25835250 0 0 Inversion 465595 FN2951-S Chr3 25814853 25835245 0 0 Inversion 20392 FN2951-S Chr3 29166787 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN2951-S Chr3 3853850 3912700 0 0 Inversion 58850 FN2951-S Chr3 3853867 3912703 0 0 Inversion 58836 FN2951-S Chr4 11553475 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g20640 retrotransposon, putative, centromere-specific, expressed FN2951-S Chr4 16096371 16494242 0 0 Inversion 397871 FN2951-S Chr4 18395644 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN2951-S Chr4 19849657 19849661 0 0 Deletion 4 FRAME_SHIFT HET LOC_Os04g32870 pentatricopeptide repeat-containing protein, putative, expressed FN2951-S Chr4 23640298 23640304 0 0 Deletion 6 INTERGENIC HOMO FN2951-S Chr4 26058546 26058552 0 0 Deletion 6 INTERGENIC HOMO FN2951-S Chr4 28032467 28032468 0 0 Deletion 1 INTERGENIC HOMO FN2951-S Chr4 321717 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os04g01480 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed FN2951-S Chr4 4853057 4853143 0 0 Deletion 86 intergenic_region HET FN2951-S Chr5 12942218 12942230 0 0 Deletion 12 INTERGENIC HET FN2951-S Chr5 27466641 27466649 0 0 Deletion 8 FRAME_SHIFT HET LOC_Os05g47910 retrotransposon protein, putative, unclassified, expressed FN2951-S Chr5 8759769 8759778 0 0 Deletion 9 INTERGENIC HOMO FN2951-S Chr6 14041752 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN2951-S Chr6 19238242 Chr4 11584971 0 Translocation 0 FN2951-S Chr6 24370798 C-A 0 0 Single Base Substitution 0 UTR_3_PRIME HET FN2951-S Chr6 26238325 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN2951-S Chr6 26435941 26435942 0 0 Deletion 1 FRAME_SHIFT HET LOC_Os06g43880 prenyltransferase, putative, expressed FN2951-S Chr6 30058988 30058988 0 0 Insertion 2 INTERGENIC HET FN2951-S Chr6 7029076 7029078 0 0 Deletion 2 INTERGENIC HET FN2951-S Chr6 7339143 T-C 0 0 Single Base Substitution 0 INTRON HET FN2951-S Chr7 10812725 Chr6 24395506 0 Translocation 0 LOC_Os07g18240 lectin-like receptor kinase, putative, expressed FN2951-S Chr7 11121085 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os07g18790 retrotransposon protein, putative, unclassified FN2951-S Chr7 1185382 1185397 0 0 Deletion 15 CODON_DELETION HET LOC_Os07g03110 OsFBX213 - F-box domain containing protein, expressed FN2951-S Chr7 13632907 13632908 0 0 Deletion 1 intergenic_region HET FN2951-S Chr7 1409279 1409283 0 0 Deletion 4 downstream_gene_variant HET FN2951-S Chr7 14225238 C-G 0 0 Single Base Substitution 0 INTERGENIC HET FN2951-S Chr7 24223393 24223403 0 0 Deletion 10 SPLICE_SITE_REGION HET FN2951-S Chr7 7853027 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os07g13680 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2951-S Chr8 26847326 26847326 0 0 Insertion 3 INTERGENIC HET FN2951-S Chr8 8460526 C-T 0 0 Single Base Substitution 0 STOP_GAINED HET LOC_Os08g14170 retrotransposon protein, putative, Ty1-copia subclass, expressed FN2951-S Chr8 8953700 8953700 0 0 Insertion 28 upstream_gene_variant HET FN2951-S Chr9 3292717 3292718 0 0 Deletion 1 downstream_gene_variant HET