FN2991-S Chr1 16914490 16914490 0 0 Insertion 35 downstream_gene_variant HET FN2991-S Chr1 20922489 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN2991-S Chr1 34503483 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN2991-S Chr1 6825383 6825393 0 0 Deletion 10 INTERGENIC HET FN2991-S Chr1 8926302 8926302 0 0 Insertion 1 upstream_gene_variant HET FN2991-S Chr10 19384333 Chr6 10870015 0 Translocation 0 FN2991-S Chr10 2646246 2646247 0 0 Deletion 1 upstream_gene_variant HET FN2991-S Chr10 3245048 3245048 0 0 Insertion 1 upstream_gene_variant HET FN2991-S Chr10 3579736 3579737 0 0 Deletion 1 INTRON HET FN2991-S Chr10 4901798 4901798 0 0 Insertion 3 downstream_gene_variant HET FN2991-S Chr10 6718858 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN2991-S Chr10 8670969 8670969 0 0 Insertion 1 upstream_gene_variant HET FN2991-S Chr10 87041 87041 0 0 Insertion 98 upstream_gene_variant HET FN2991-S Chr11 12044926 12044926 0 0 Insertion 54 intergenic_region HET FN2991-S Chr11 19900654 T-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN2991-S Chr11 20582229 20582229 0 0 Insertion 35 upstream_gene_variant HET FN2991-S Chr11 22911851 22911857 0 0 Deletion 6 CODON_DELETION HET LOC_Os11g38640 expressed protein FN2991-S Chr11 27420985 Chr7 17149932 0 Translocation 0 FN2991-S Chr11 4273268 4273287 0 0 Deletion 19 upstream_gene_variant HET FN2991-S Chr11 4874381 4874388 0 0 Deletion 7 upstream_gene_variant HET FN2991-S Chr11 7357254 C-T 0 0 Single Base Substitution 0 INTRON HOMO FN2991-S Chr11 7674446 7674454 0 0 Deletion 8 INTERGENIC HOMO FN2991-S Chr12 11016854 11016854 0 0 Insertion 1 downstream_gene_variant HET FN2991-S Chr12 11079460 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g19080 expressed protein FN2991-S Chr12 16885741 16885769 0 0 Deletion 28 downstream_gene_variant HET FN2991-S Chr12 26832904 26832905 0 0 Deletion 1 frameshift_variant HET LOC_Os12g43230 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2991-S Chr12 8158223 8158224 0 0 Deletion 1 INTERGENIC HET FN2991-S Chr2 14792958 14792958 0 0 Insertion 41 upstream_gene_variant HET FN2991-S Chr2 31371048 31371049 0 0 Deletion 1 intergenic_region HET FN2991-S Chr2 32526714 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN2991-S Chr3 12206509 12206510 0 0 Deletion 1 upstream_gene_variant HET FN2991-S Chr3 151486 G-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN2991-S Chr3 21257416 21257417 0 0 Deletion 1 upstream_gene_variant HET FN2991-S Chr3 24678380 Chr2 9608628 0 Translocation 0 FN2991-S Chr3 27795430 27795529 0 0 Deletion 99 upstream_gene_variant HET FN2991-S Chr3 5756922 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN2991-S Chr3 6519735 G-A 0 0 Single Base Substitution 0 INTRON HET FN2991-S Chr4 10187718 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN2991-S Chr4 11050726 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN2991-S Chr4 16905081 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN2991-S Chr4 18571970 18571970 0 0 Insertion 84 intergenic_region HET FN2991-S Chr4 20162424 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN2991-S Chr4 24797483 24926351 0 0 Inversion 128868 FN2991-S Chr4 24797499 24926355 0 0 Inversion 128856 FN2991-S Chr4 24904996 24905000 0 0 Deletion 4 upstream_gene_variant HET FN2991-S Chr4 25596298 25596307 0 0 Deletion 9 INTERGENIC HET FN2991-S Chr4 33750280 Chr3 5010024 0 Translocation 0 FN2991-S Chr4 725425 725425 0 0 Insertion 67 upstream_gene_variant HET FN2991-S Chr4 8585048 T-A 0 0 Single Base Substitution 0 INTRON HET FN2991-S Chr5 10289090 10289090 0 0 Insertion 1 upstream_gene_variant HET FN2991-S Chr5 11528309 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g19750 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2991-S Chr5 12945564 12945565 0 0 Deletion 1 downstream_gene_variant HET FN2991-S Chr5 22292504 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN2991-S Chr5 24701817 24701819 0 0 Deletion 2 downstream_gene_variant HET FN2991-S Chr5 27368678 27368678 0 0 Insertion 12 downstream_gene_variant HET FN2991-S Chr5 29644413 T-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN2991-S Chr5 7147399 A-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN2991-S Chr5 7186005 7186011 0 0 Deletion 6 INTERGENIC HET FN2991-S Chr5 7225887 7225906 0 0 Deletion 19 INTERGENIC HOMO FN2991-S Chr5 9742950 A-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN2991-S Chr6 1233526 1233526 0 0 Insertion 2 intron_variant HET FN2991-S Chr6 19380419 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN2991-S Chr6 20501793 Chr1 11600022 0 Translocation 0 LOC_Os01g20820 expressed protein FN2991-S Chr6 9896753 Chr1 9951767 0 Translocation 0 FN2991-S Chr7 11392750 11392750 0 0 Insertion 1 upstream_gene_variant HET FN2991-S Chr7 14189955 14189956 0 0 Deletion 1 downstream_gene_variant HET FN2991-S Chr7 20984972 Chr5 10173549 0 Translocation 0 LOC_Os07g35030 expressed protein FN2991-S Chr7 23377254 23377254 0 0 Insertion 1 upstream_gene_variant HET FN2991-S Chr7 26855238 26855239 0 0 Deletion 1 INTERGENIC HET FN2991-S Chr7 28594227 T-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN2991-S Chr7 28603125 28603125 0 0 Insertion 1 upstream_gene_variant HET FN2991-S Chr7 6332101 6332190 0 0 Deletion 89 upstream_gene_variant HET FN2991-S Chr8 12549627 A-C 0 0 Single Base Substitution 0 INTERGENIC HET FN2991-S Chr8 12995774 T-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN2991-S Chr8 1594378 1594379 0 0 Deletion 1 upstream_gene_variant HET FN2991-S Chr8 24779573 24779573 0 0 Insertion 2 INTERGENIC HET FN2991-S Chr8 3980778 3980778 0 0 Insertion 1 upstream_gene_variant HET FN2991-S Chr8 4076042 G-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os08g07290 HEAT repeat family protein, putative, expressed FN2991-S Chr8 4581844 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os08g08070 transporter family protein, putative, expressed FN2991-S Chr8 6083709 6083709 0 0 Insertion 1 upstream_gene_variant HET FN2991-S Chr8 6677660 6677661 0 0 Deletion 1 upstream_gene_variant HET FN2991-S Chr9 2321506 Chr4 12931320 0 Translocation 0