FN3039-S Chr1 11932646 A-G 0 0 Single Base Substitution 0 HET FN3039-S Chr1 18713849 G-A 0 0 Single Base Substitution 0 HET FN3039-S Chr1 7927285 7927318 0 0 Deletion 33 stop_gained&disruptive_inframe_deletion Homo LOC_Os01g14130 expressed protein FN3039-S Chr10 4273769 G-A 0 0 Single Base Substitution 0 HET FN3039-S Chr10 4734594 T-C 0 0 Single Base Substitution 0 HET FN3039-S Chr11 18223290 G-A 0 0 Single Base Substitution 0 HET FN3039-S Chr11 18328330 Chr5 24765051 0 Translocation 0 FN3039-S Chr11 18328330 Chr5 24765051 0 Translocation 0 LOC_Os05g42330 secretory carrier-associated membrane protein, putative, expressed FN3039-S Chr11 18329012 Chr5 24765068 0 Translocation 0 FN3039-S Chr11 18329012 Chr5 24765068 0 Translocation 0 LOC_Os05g42330 secretory carrier-associated membrane protein, putative, expressed FN3039-S Chr11 21846360 Chr8 23507491 0 Translocation 0 FN3039-S Chr11 24984739 25190324 0 0 Inversion 0 FN3039-S Chr11 24984742 25190335 0 0 Inversion 0 FN3039-S Chr11 4190645 G-A 0 0 Single Base Substitution 0 Homo FN3039-S Chr11 8063948 Chr10 4751593 0 Translocation 0 LOC_Os11g14360 retrotransposon, putative, centromere-specific FN3039-S Chr11 9676191 Chr3 19441550 0 Translocation 0 LOC_Os03g34129 retrotransposon protein, putative, Ty1-copia subclass FN3039-S Chr11 9676191 Chr3 19441550 0 Translocation 0 LOC_Os11g17360 expressed protein FN3039-S Chr12 21842515 21842731 0 0 Deletion 216 HET FN3039-S Chr12 7550816 T-A 0 0 Single Base Substitution 0 HET FN3039-S Chr2 11142922 11142923 0 0 Deletion 1 frameshift_variant HET LOC_Os02g19100 retrotransposon protein, putative, unclassified, expressed FN3039-S Chr2 11490952 11490957 0 0 Deletion 5 HET FN3039-S Chr2 17223059 C-T 0 0 Single Base Substitution 0 HET FN3039-S Chr2 21368267 G-A 0 0 Single Base Substitution 0 HET FN3039-S Chr3 18788271 G-A 0 0 Single Base Substitution 0 HET FN3039-S Chr3 22170706 T-C 0 0 Single Base Substitution 0 HET FN3039-S Chr3 24462905 24462907 0 0 Deletion 2 HET FN3039-S Chr4 16050701 16050705 0 0 Deletion 4 Homo FN3039-S Chr4 214886 A-G 0 0 Single Base Substitution 0 Homo FN3039-S Chr4 2467999 T-G 0 0 Single Base Substitution 0 Homo FN3039-S Chr4 9927598 C-T 0 0 Single Base Substitution 0 Homo FN3039-S Chr5 10588489 10588490 0 0 Deletion 1 Homo FN3039-S Chr5 134203 A-T 0 0 Single Base Substitution 0 HET FN3039-S Chr5 134207 C-T 0 0 Single Base Substitution 0 HET FN3039-S Chr5 17201562 17201563 0 0 Deletion 1 Homo FN3039-S Chr5 1901762 1901763 0 0 Deletion 1 HET FN3039-S Chr5 23913026 Chr4 3658238 0 Translocation 0 FN3039-S Chr5 4958001 4992000 0 0 Deletion 33999 LOC_Os05g08960 ubiquitin-conjugating enzyme, putative, expressed FN3039-S Chr5 4958001 4992000 0 0 Deletion 33999 LOC_Os05g08970 SSRP1-like FACT complex subunit, putative, expressed FN3039-S Chr5 4958001 4992000 0 0 Deletion 33999 LOC_Os05g08980 expressed protein FN3039-S Chr5 4958001 4992000 0 0 Deletion 33999 LOC_Os05g08990 glutaminyl-tRNA synthetase, putative, expressed FN3039-S Chr5 4958001 4992000 0 0 Deletion 33999 LOC_Os05g09000 expressed protein FN3039-S Chr5 4960599 5617675 0 0 Inversion 0 LOC_Os05g08960 ubiquitin-conjugating enzyme, putative, expressed FN3039-S Chr5 4989513 5617682 0 0 Inversion 0 FN3039-S Chr5 5826522 T-C 0 0 Single Base Substitution 0 HET FN3039-S Chr5 6045777 C-A 0 0 Single Base Substitution 0 HET FN3039-S Chr6 12092544 Chr5 110102 0 Translocation 0 FN3039-S Chr6 14356375 G-A 0 0 Single Base Substitution 0 HET FN3039-S Chr6 14860784 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os06g25370 retrotransposon protein, putative, unclassified FN3039-S Chr6 19291115 G-T 0 0 Single Base Substitution 0 Homo FN3039-S Chr6 21771802 21771807 0 0 Deletion 5 HET FN3039-S Chr6 22189191 G-C 0 0 Single Base Substitution 0 Homo FN3039-S Chr7 12924528 12924532 0 0 Deletion 4 HET FN3039-S Chr7 19475613 A-G 0 0 Single Base Substitution 0 HET FN3039-S Chr7 22054665 22054667 0 0 Insertion 2 HET FN3039-S Chr8 15726741 G-A 0 0 Single Base Substitution 0 HET FN3039-S Chr8 25824153 25824156 0 0 Insertion 3 HET FN3039-S Chr8 27884637 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os08g44300 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3039-S Chr8 8422184 A-G 0 0 Single Base Substitution 0 HET FN3039-S Chr9 1086431 C-T 0 0 Single Base Substitution 0 HET FN3039-S Chr9 1219773 C-T 0 0 Single Base Substitution 0 HET FN3039-S Chr9 15872099 A-C 0 0 Single Base Substitution 0 Homo FN3039-S Chr9 4077282 T-A 0 0 Single Base Substitution 0 HET FN3039-S Chr9 9710730 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os09g15890 retrotransposon protein, putative, Ty3-gypsy subclass