FN3110-S Chr1 1093167 G-C 0 0 Single Base Substitution 0 Homo FN3110-S Chr1 11715001 11734000 0 0 Deletion 18999 LOC_Os01g20980 pectinesterase, putative, expressed FN3110-S Chr1 11715001 11734000 0 0 Deletion 18999 LOC_Os01g20990 retrotransposon protein, putative, unclassified, expressed FN3110-S Chr1 11715001 11734000 0 0 Deletion 18999 LOC_Os01g21000 retrotransposon protein, putative, unclassified, expressed FN3110-S Chr1 11715001 11734000 0 0 Deletion 18999 LOC_Os01g21010 expressed protein FN3110-S Chr1 11798198 12210120 0 0 Inversion 0 FN3110-S Chr1 11798198 12210120 0 0 Inversion 0 LOC_Os01g21760 retrotransposon protein, putative, unclassified FN3110-S Chr1 11798207 12210126 0 0 Inversion 0 FN3110-S Chr1 11798207 12210126 0 0 Inversion 0 LOC_Os01g21760 retrotransposon protein, putative, unclassified FN3110-S Chr1 11978001 12006000 0 0 Deletion 27999 LOC_Os01g21450 expressed protein FN3110-S Chr1 11978001 12006000 0 0 Deletion 27999 LOC_Os01g21480 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3110-S Chr1 11978001 12006000 0 0 Deletion 27999 LOC_Os01g21490 transposon protein, putative, CACTA, En/Spm sub-class FN3110-S Chr1 13976638 G-A 0 0 Single Base Substitution 0 HET FN3110-S Chr1 14568001 14616000 0 0 Deletion 47999 LOC_Os01g25700 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3110-S Chr1 14568001 14616000 0 0 Deletion 47999 LOC_Os01g25710 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3110-S Chr1 14568001 14616000 0 0 Deletion 47999 LOC_Os01g25720 disease resistance protein RGA4, putative, expressed FN3110-S Chr1 14568001 14616000 0 0 Deletion 47999 LOC_Os01g25730 retrotransposon protein, putative, unclassified FN3110-S Chr1 14568001 14616000 0 0 Deletion 47999 LOC_Os01g25740 powdery mildew resistance protein PM3F, putative, expressed FN3110-S Chr1 14568001 14616000 0 0 Deletion 47999 LOC_Os01g25760 powdery mildew resistance protein PM3F, putative, expressed FN3110-S Chr1 14568001 14616000 0 0 Deletion 47999 LOC_Os01g25770 expressed protein FN3110-S Chr1 14568001 14616000 0 0 Deletion 47999 LOC_Os01g25780 retrotransposon protein, putative, unclassified, expressed FN3110-S Chr1 14568001 14616000 0 0 Deletion 47999 LOC_Os01g25800 expressed protein FN3110-S Chr1 14568001 14616000 0 0 Deletion 47999 LOC_Os01g25810 powdery mildew resistance protein PM3A, putative, expressed FN3110-S Chr1 16267194 16267197 0 0 Deletion 3 HET FN3110-S Chr1 16431333 T-G 0 0 Single Base Substitution 0 HET FN3110-S Chr1 16442553 T-A 0 0 Single Base Substitution 0 HET FN3110-S Chr1 16442554 C-A 0 0 Single Base Substitution 0 HET FN3110-S Chr1 19770001 19792000 0 0 Deletion 21999 LOC_Os01g35710 retrotransposon protein, putative, Ty3-gypsy subclass FN3110-S Chr1 19770001 19792000 0 0 Deletion 21999 LOC_Os01g35720 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3110-S Chr1 19770001 19792000 0 0 Deletion 21999 LOC_Os01g35730 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3110-S Chr1 20203001 20240000 0 0 Deletion 36999 LOC_Os01g36400 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3110-S Chr1 20203001 20240000 0 0 Deletion 36999 LOC_Os01g36410 expressed protein FN3110-S Chr1 20203001 20240000 0 0 Deletion 36999 LOC_Os01g36420 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3110-S Chr1 20203001 20240000 0 0 Deletion 36999 LOC_Os01g36430 retrotransposon protein, putative, unclassified, expressed FN3110-S Chr1 20203001 20240000 0 0 Deletion 36999 LOC_Os01g36440 retrotransposon protein, putative, unclassified, expressed FN3110-S Chr1 20203001 20240000 0 0 Deletion 36999 LOC_Os01g36450 retrotransposon protein, putative, unclassified, expressed FN3110-S Chr1 34231001 34251000 0 0 Deletion 19999 LOC_Os01g59230 retrotransposon protein, putative, unclassified, expressed FN3110-S Chr1 34231001 34251000 0 0 Deletion 19999 LOC_Os01g59240 expressed protein FN3110-S Chr1 34231001 34251000 0 0 Deletion 19999 LOC_Os01g59250 expressed protein FN3110-S Chr1 34231001 34251000 0 0 Deletion 19999 LOC_Os01g59260 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3110-S Chr1 37535169 37535170 0 0 Deletion 1 HET FN3110-S Chr1 37611737 37611738 0 0 Deletion 1 HET FN3110-S Chr1 3983001 3997000 0 0 Deletion 13999 LOC_Os01g08190 transcriptional corepressor LEUNIG, putative, expressed FN3110-S Chr1 3983001 3997000 0 0 Deletion 13999 LOC_Os01g08200 ubiquitin carboxyl-terminal hydrolase 14, putative, expressed FN3110-S Chr1 7055001 7071000 0 0 Deletion 15999 LOC_Os01g12750 cytochrome P450, putative, expressed FN3110-S Chr1 7055001 7071000 0 0 Deletion 15999 LOC_Os01g12760 cytochrome P450, putative, expressed FN3110-S Chr1 7821753 7821755 0 0 Insertion 2 HET FN3110-S Chr10 11127001 11182000 0 0 Deletion 54999 LOC_Os10g21700 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3110-S Chr10 11127001 11182000 0 0 Deletion 54999 LOC_Os10g21720 expressed protein FN3110-S Chr10 11127001 11182000 0 0 Deletion 54999 LOC_Os10g21730 retrotransposon protein, putative, Ty1-copia subclass, expressed FN3110-S Chr10 11127001 11182000 0 0 Deletion 54999 LOC_Os10g21740 expressed protein FN3110-S Chr10 11127001 11182000 0 0 Deletion 54999 LOC_Os10g21760 retrotransposon protein, putative, unclassified FN3110-S Chr10 11127001 11182000 0 0 Deletion 54999 LOC_Os10g21770 expressed protein FN3110-S Chr10 11127001 11182000 0 0 Deletion 54999 LOC_Os10g21780 hypothetical protein FN3110-S Chr10 11127001 11182000 0 0 Deletion 54999 LOC_Os10g21784 expressed protein FN3110-S Chr10 11191354 A-T 0 0 Single Base Substitution 0 HET FN3110-S Chr10 12840001 12851000 0 0 Deletion 10999 LOC_Os10g24940 expressed protein FN3110-S Chr10 12840001 12851000 0 0 Deletion 10999 LOC_Os10g24954 ulp1 protease family, C-terminal catalytic domain containing protein, expressed FN3110-S Chr10 13734001 13754000 0 0 Deletion 19999 LOC_Os10g26420 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3110-S Chr10 16555001 16573000 0 0 Deletion 17999 LOC_Os10g31590 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3110-S Chr10 16555001 16573000 0 0 Deletion 17999 LOC_Os10g31600 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3110-S Chr10 16555001 16573000 0 0 Deletion 17999 LOC_Os10g31610 retrotransposon protein, putative, unclassified, expressed FN3110-S Chr10 16555001 16573000 0 0 Deletion 17999 LOC_Os10g31620 glycine-rich cell wall structural protein 2 precursor, putative, expressed FN3110-S Chr10 17816001 17848000 0 0 Deletion 31999 LOC_Os10g33740 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3110-S Chr10 17816001 17848000 0 0 Deletion 31999 LOC_Os10g33750 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3110-S Chr10 22338001 22363000 0 0 Deletion 24999 LOC_Os10g41560 expressed protein FN3110-S Chr10 5505041 5505052 0 0 Deletion 11 HET FN3110-S Chr10 6996001 7019000 0 0 Deletion 22999 LOC_Os10g12570 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3110-S Chr10 6996001 7019000 0 0 Deletion 22999 LOC_Os10g12580 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3110-S Chr10 6996001 7019000 0 0 Deletion 22999 LOC_Os10g12590 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3110-S Chr10 7189621 C-G 0 0 Single Base Substitution 0 HET FN3110-S Chr10 8069001 8088000 0 0 Deletion 18999 LOC_Os10g15160 conserved hypothetical protein FN3110-S Chr10 8069001 8088000 0 0 Deletion 18999 LOC_Os10g15164 expressed protein FN3110-S Chr10 8069001 8088000 0 0 Deletion 18999 LOC_Os10g15170 retrotransposon protein, putative, unclassified, expressed FN3110-S Chr10 8411001 8421000 0 0 Deletion 9999 LOC_Os10g16880 retrotransposon protein, putative, unclassified, expressed FN3110-S Chr10 9337001 9424000 0 0 Deletion 86999 LOC_Os10g18370 transcriptional regulator, putative, expressed FN3110-S Chr10 9337001 9424000 0 0 Deletion 86999 LOC_Os10g18380 expressed protein FN3110-S Chr10 9337001 9424000 0 0 Deletion 86999 LOC_Os10g18390 expressed protein FN3110-S Chr10 9337001 9424000 0 0 Deletion 86999 LOC_Os10g18400 beta-galactosidase precursor, putative, expressed FN3110-S Chr10 9337001 9424000 0 0 Deletion 86999 LOC_Os10g18410 expressed protein FN3110-S Chr10 9337001 9424000 0 0 Deletion 86999 LOC_Os10g18420 retrotransposon protein, putative, Ty1-copia subclass, expressed FN3110-S Chr10 9337001 9424000 0 0 Deletion 86999 LOC_Os10g18430 agmatine coumaroyltransferase, putative, expressed FN3110-S Chr10 9337001 9424000 0 0 Deletion 86999 LOC_Os10g18440 retrotransposon protein, putative, unclassified, expressed FN3110-S Chr10 9337001 9424000 0 0 Deletion 86999 LOC_Os10g18450 expressed protein FN3110-S Chr10 9337001 9424000 0 0 Deletion 86999 LOC_Os10g18460 expressed protein FN3110-S Chr10 9337001 9424000 0 0 Deletion 86999 LOC_Os10g18470 expressed protein FN3110-S Chr10 9337001 9424000 0 0 Deletion 86999 LOC_Os10g18480 glucosyltransferase, putative, expressed FN3110-S Chr10 9337001 9424000 0 0 Deletion 86999 LOC_Os10g18490 cytokinin-O-glucosyltransferase 2, putative, expressed FN3110-S Chr10 9337001 9424000 0 0 Deletion 86999 LOC_Os10g18500 expressed protein FN3110-S Chr10 9337001 9424000 0 0 Deletion 86999 LOC_Os10g18510 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed FN3110-S Chr10 9337001 9424000 0 0 Deletion 86999 LOC_Os10g18520 expressed protein FN3110-S Chr10 9337001 9424000 0 0 Deletion 86999 LOC_Os10g18530 cytokinin-O-glucosyltransferase 2, putative, expressed FN3110-S Chr10 9337001 9424000 0 0 Deletion 86999 LOC_Os10g18540 retrotransposon protein, putative, Ty3-gypsy subclass FN3110-S Chr10 9337001 9424000 0 0 Deletion 86999 LOC_Os10g18550 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3110-S Chr10 9337001 9424000 0 0 Deletion 86999 LOC_Os10g18560 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3110-S Chr10 9337001 9424000 0 0 Deletion 86999 LOC_Os10g18570 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3110-S Chr10 9337001 9424000 0 0 Deletion 86999 LOC_Os10g18580 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3110-S Chr11 1023001 1052000 0 0 Deletion 28999 LOC_Os11g02950 auxin efflux carrier component, putative, expressed FN3110-S Chr11 1023001 1052000 0 0 Deletion 28999 LOC_Os11g02964 FAR1 family protein, expressed FN3110-S Chr11 1023001 1052000 0 0 Deletion 28999 LOC_Os11g02980 expressed protein FN3110-S Chr11 1023001 1052000 0 0 Deletion 28999 LOC_Os11g02990 conserved hypothetical protein FN3110-S Chr11 1023001 1052000 0 0 Deletion 28999 LOC_Os11g03000 retrotransposon protein, putative, unclassified FN3110-S Chr11 1023001 1052000 0 0 Deletion 28999 LOC_Os11g03010 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3110-S Chr11 1023001 1052000 0 0 Deletion 28999 LOC_Os11g03020 retrotransposon protein, putative, Ty3-gypsy subclass FN3110-S Chr11 10667584 G-A 0 0 Single Base Substitution 0 STOP_GAINED Homo LOC_Os11g18790 retrotransposon protein, putative, unclassified, expressed FN3110-S Chr11 11028985 11028988 0 0 Deletion 3 HET FN3110-S Chr11 11030121 11030130 0 0 Deletion 9 HET FN3110-S Chr11 11393110 T-A 0 0 Single Base Substitution 0 HET FN3110-S Chr11 1202001 1221000 0 0 Deletion 18999 LOC_Os11g03270 nucleoside-triphosphatase, putative, expressed FN3110-S Chr11 1202001 1221000 0 0 Deletion 18999 LOC_Os11g03280 transposon protein, putative, unclassified, expressed FN3110-S Chr11 13419001 13453000 0 0 Deletion 33999 LOC_Os11g23740 retrotransposon protein, putative, Ty1-copia subclass FN3110-S Chr11 13419001 13453000 0 0 Deletion 33999 LOC_Os11g23750 retrotransposon protein, putative, Ty1-copia subclass, expressed FN3110-S Chr11 13419001 13453000 0 0 Deletion 33999 LOC_Os11g23760 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3110-S Chr11 13419001 13453000 0 0 Deletion 33999 LOC_Os11g23770 cysteine protease, putative, expressed FN3110-S Chr11 13419001 13453000 0 0 Deletion 33999 LOC_Os11g23780 expressed protein FN3110-S Chr11 13793001 13811000 0 0 Deletion 17999 LOC_Os11g24230 expressed protein FN3110-S Chr11 13793001 13811000 0 0 Deletion 17999 LOC_Os11g24240 sinapoylglucose choline sinapoyltransferase, putative, expressed FN3110-S Chr11 14626001 14684000 0 0 Deletion 57999 LOC_Os11g25650 retrotransposon protein, putative, unclassified FN3110-S Chr11 14626001 14684000 0 0 Deletion 57999 LOC_Os11g25660 retrotransposon protein, putative, Ty3-gypsy subclass FN3110-S Chr11 14626001 14684000 0 0 Deletion 57999 LOC_Os11g25670 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3110-S Chr11 14626001 14684000 0 0 Deletion 57999 LOC_Os11g25680 retrotransposon protein, putative, unclassified FN3110-S Chr11 14626001 14684000 0 0 Deletion 57999 LOC_Os11g25690 retrotransposon protein, putative, unclassified, expressed FN3110-S Chr11 14626001 14684000 0 0 Deletion 57999 LOC_Os11g25700 tropinone reductase, putative, expressed FN3110-S Chr11 14626001 14684000 0 0 Deletion 57999 LOC_Os11g25720 cytokinin-N-glucosyltransferase 1, putative, expressed FN3110-S Chr11 14626001 14684000 0 0 Deletion 57999 LOC_Os11g25740 expressed protein FN3110-S Chr11 15784001 15808000 0 0 Deletion 23999 LOC_Os11g27430 NB-ARC domain containing protein, expressed FN3110-S Chr11 15784001 15808000 0 0 Deletion 23999 LOC_Os11g27440 MLA7, putative, expressed FN3110-S Chr11 16597001 16628000 0 0 Deletion 30999 LOC_Os11g28700 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3110-S Chr11 16597001 16628000 0 0 Deletion 30999 LOC_Os11g28710 expressed protein FN3110-S Chr11 16597001 16628000 0 0 Deletion 30999 LOC_Os11g28720 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3110-S Chr11 16597001 16628000 0 0 Deletion 30999 LOC_Os11g28730 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3110-S Chr11 25636001 25651000 0 0 Deletion 14999 LOC_Os11g42590 expressed protein FN3110-S Chr11 25636001 25651000 0 0 Deletion 14999 LOC_Os11g42600 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3110-S Chr11 25636001 25651000 0 0 Deletion 14999 LOC_Os11g42610 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3110-S Chr11 3178215 T-C 0 0 Single Base Substitution 0 Homo FN3110-S Chr11 4526001 4554000 0 0 Deletion 27999 LOC_Os11g08569 cycloartenol synthase, putative, expressed FN3110-S Chr11 5884001 5902000 0 0 Deletion 17999 LOC_Os11g10720 Cf2/Cf5 disease resistance protein, putative, expressed FN3110-S Chr11 5884001 5902000 0 0 Deletion 17999 LOC_Os11g10730 retrotransposon protein, putative, unclassified, expressed FN3110-S Chr11 5884001 5902000 0 0 Deletion 17999 LOC_Os11g10740 tetratricopeptide-like helical, putative, expressed FN3110-S Chr11 5884001 5902000 0 0 Deletion 17999 LOC_Os11g10750 OsSCP48 - Putative Serine Carboxypeptidase homologue, expressed FN3110-S Chr11 6013018 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os11g10900 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3110-S Chr11 7598001 7612000 0 0 Deletion 13999 LOC_Os11g13810 non-lysosomal glucosylceramidase, putative, expressed FN3110-S Chr11 7669001 7688000 0 0 Deletion 18999 LOC_Os11g13900 expressed protein FN3110-S Chr11 7669001 7688000 0 0 Deletion 18999 LOC_Os11g13910 expressed protein FN3110-S Chr11 7669001 7688000 0 0 Deletion 18999 LOC_Os11g13920 retrotransposon protein, putative, unclassified, expressed FN3110-S Chr11 7721001 7738000 0 0 Deletion 16999 LOC_Os11g13950 hypothetical protein FN3110-S Chr11 7721001 7738000 0 0 Deletion 16999 LOC_Os11g13960 retrotransposon protein, putative, Ty1-copia subclass, expressed FN3110-S Chr11 8483001 8501000 0 0 Deletion 17999 LOC_Os11g15070 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3110-S Chr11 8483001 8501000 0 0 Deletion 17999 LOC_Os11g15080 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3110-S Chr11 8483001 8501000 0 0 Deletion 17999 LOC_Os11g15090 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3110-S Chr11 8483001 8501000 0 0 Deletion 17999 LOC_Os11g15100 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3110-S Chr11 9658001 9671000 0 0 Deletion 12999 LOC_Os11g17320 hypothetical protein FN3110-S Chr11 9658001 9671000 0 0 Deletion 12999 LOC_Os11g17330 stripe rust resistance protein Yr10, putative, expressed FN3110-S Chr11 9709001 9727000 0 0 Deletion 17999 LOC_Os11g17410 transposon protein, putative, CACTA, En/Spm sub-class FN3110-S Chr11 9709001 9727000 0 0 Deletion 17999 LOC_Os11g17420 retrotransposon protein, putative, unclassified, expressed FN3110-S Chr11 9709001 9727000 0 0 Deletion 17999 LOC_Os11g17430 retrotransposon protein, putative, unclassified, expressed FN3110-S Chr11 9709001 9727000 0 0 Deletion 17999 LOC_Os11g17440 enoyl-CoA hydratase/isomerase family protein, expressed FN3110-S Chr12 10971001 10984000 0 0 Deletion 12999 LOC_Os12g18900 aminotransferase, putative, expressed FN3110-S Chr12 10971001 10984000 0 0 Deletion 12999 LOC_Os12g18910 transposon protein, putative, unclassified, expressed FN3110-S Chr12 10971001 10984000 0 0 Deletion 12999 LOC_Os12g18920 expressed protein FN3110-S Chr12 11761001 11785000 0 0 Deletion 23999 LOC_Os12g20190 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3110-S Chr12 11761001 11785000 0 0 Deletion 23999 LOC_Os12g20200 retrotransposon protein, putative, unclassified, expressed FN3110-S Chr12 11761001 11785000 0 0 Deletion 23999 LOC_Os12g20210 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3110-S Chr12 13633001 13647000 0 0 Deletion 13999 LOC_Os12g23990 retrotransposon protein, putative, unclassified, expressed FN3110-S Chr12 13633001 13647000 0 0 Deletion 13999 LOC_Os12g24010 hypothetical protein FN3110-S Chr12 14135001 14159000 0 0 Deletion 23999 LOC_Os12g24680 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3110-S Chr12 14135001 14159000 0 0 Deletion 23999 LOC_Os12g24690 retrotransposon protein, putative, Ty1-copia subclass, expressed FN3110-S Chr12 14135001 14159000 0 0 Deletion 23999 LOC_Os12g24700 retrotransposon protein, putative, Ty1-copia subclass FN3110-S Chr12 14336001 14353000 0 0 Deletion 16999 LOC_Os12g24980 expressed protein FN3110-S Chr12 14336001 14353000 0 0 Deletion 16999 LOC_Os12g24990 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3110-S Chr12 14531001 14559000 0 0 Deletion 27999 LOC_Os12g25260 expressed protein FN3110-S Chr12 14531001 14559000 0 0 Deletion 27999 LOC_Os12g25280 expressed protein FN3110-S Chr12 14531001 14559000 0 0 Deletion 27999 LOC_Os12g25290 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3110-S Chr12 15861001 15893000 0 0 Deletion 31999 LOC_Os12g27090 expressed protein FN3110-S Chr12 15861001 15893000 0 0 Deletion 31999 LOC_Os12g27096 retrotransposon protein, putative, Ty1-copia subclass, expressed FN3110-S Chr12 16711001 16723000 0 0 Deletion 11999 LOC_Os12g28270 amidohydrolase, putative, expressed FN3110-S Chr12 16711001 16723000 0 0 Deletion 11999 LOC_Os12g28280 retrotransposon protein, putative, unclassified, expressed FN3110-S Chr12 19380001 19424000 0 0 Deletion 43999 LOC_Os12g32130 trehalose phosphatase, putative, expressed FN3110-S Chr12 19380001 19424000 0 0 Deletion 43999 LOC_Os12g32140 transposon protein, putative, unclassified, expressed FN3110-S Chr12 19380001 19424000 0 0 Deletion 43999 LOC_Os12g32150 expressed protein FN3110-S Chr12 19380001 19424000 0 0 Deletion 43999 LOC_Os12g32160 expressed protein FN3110-S Chr12 19380001 19424000 0 0 Deletion 43999 LOC_Os12g32170 expressed protein FN3110-S Chr12 20093134 20093140 0 0 Deletion 6 Homo FN3110-S Chr12 21154001 21173000 0 0 Deletion 18999 FN3110-S Chr12 22436001 22451000 0 0 Deletion 14999 LOC_Os12g36660 MATE domain containing protein, expressed FN3110-S Chr12 22696001 22711000 0 0 Deletion 14999 LOC_Os12g37030 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3110-S Chr12 22696001 22711000 0 0 Deletion 14999 LOC_Os12g37040 retrotransposon protein, putative, unclassified FN3110-S Chr12 22696001 22711000 0 0 Deletion 14999 LOC_Os12g37050 retrotransposon protein, putative, unclassified, expressed FN3110-S Chr12 22696001 22711000 0 0 Deletion 14999 LOC_Os12g37060 expressed protein FN3110-S Chr12 23760671 23760743 0 0 Insertion 72 HET FN3110-S Chr12 2505001 2522000 0 0 Deletion 16999 LOC_Os12g05470 plastocyanin-like domain containing protein, putative, expressed FN3110-S Chr12 2505001 2522000 0 0 Deletion 16999 LOC_Os12g05480 expressed protein FN3110-S Chr12 2505001 2522000 0 0 Deletion 16999 LOC_Os12g05490 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3110-S Chr12 2505001 2522000 0 0 Deletion 16999 LOC_Os12g05500 retrotransposon protein, putative, unclassified, expressed FN3110-S Chr12 2505001 2522000 0 0 Deletion 16999 LOC_Os12g05510 expressed protein FN3110-S Chr12 25552330 T-A 0 0 Single Base Substitution 0 Homo FN3110-S Chr12 26032001 26043000 0 0 Deletion 10999 LOC_Os12g41980 lipase class 3 family protein, putative, expressed FN3110-S Chr12 26032001 26043000 0 0 Deletion 10999 LOC_Os12g41990 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3110-S Chr12 27241355 27241361 0 0 Deletion 6 HET FN3110-S Chr12 740001 761000 0 0 Deletion 20999 LOC_Os12g02330 LTPL13 - Protease inhibitor/seed storage/LTP family protein precursor, expressed FN3110-S Chr12 740001 761000 0 0 Deletion 20999 LOC_Os12g02340 LTPL14 - Protease inhibitor/seed storage/LTP family protein precursor, expressed FN3110-S Chr12 7515062 G-C 0 0 Single Base Substitution 0 HET FN3110-S Chr2 10115686 10115690 0 0 Deletion 4 HET FN3110-S Chr2 11268001 11286000 0 0 Deletion 17999 LOC_Os02g19280 retrotransposon protein, putative, unclassified, expressed FN3110-S Chr2 11268001 11286000 0 0 Deletion 17999 LOC_Os02g19290 expressed protein FN3110-S Chr2 11268001 11286000 0 0 Deletion 17999 LOC_Os02g19300 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3110-S Chr2 11268001 11286000 0 0 Deletion 17999 LOC_Os02g19310 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3110-S Chr2 15927001 15954000 0 0 Deletion 26999 LOC_Os02g27100 expressed protein FN3110-S Chr2 15927001 15954000 0 0 Deletion 26999 LOC_Os02g27110 expressed protein FN3110-S Chr2 15927001 15954000 0 0 Deletion 26999 LOC_Os02g27120 retrotransposon protein, putative, LINE subclass, expressed FN3110-S Chr2 17165001 17188000 0 0 Deletion 22999 LOC_Os02g29000 Cupin domain containing protein, expressed FN3110-S Chr2 17165001 17188000 0 0 Deletion 22999 LOC_Os02g29010 retrotransposon protein, putative, unclassified, expressed FN3110-S Chr2 17165001 17188000 0 0 Deletion 22999 LOC_Os02g29020 Cupin domain containing protein, expressed FN3110-S Chr2 17165001 17188000 0 0 Deletion 22999 LOC_Os02g29030 retrotransposon protein, putative, unclassified, expressed FN3110-S Chr2 17640001 17667000 0 0 Deletion 26999 LOC_Os02g29650 retrotransposon protein, putative, unclassified FN3110-S Chr2 17640001 17667000 0 0 Deletion 26999 LOC_Os02g29660 retrotransposon protein, putative, Ty3-gypsy subclass FN3110-S Chr2 17640001 17667000 0 0 Deletion 26999 LOC_Os02g29670 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3110-S Chr2 17640001 17667000 0 0 Deletion 26999 LOC_Os02g29680 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3110-S Chr2 18927682 G-T 0 0 Single Base Substitution 0 HET FN3110-S Chr2 19531001 19557000 0 0 Deletion 25999 LOC_Os02g32880 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3110-S Chr2 19531001 19557000 0 0 Deletion 25999 LOC_Os02g32890 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3110-S Chr2 19531001 19557000 0 0 Deletion 25999 LOC_Os02g32900 expressed protein FN3110-S Chr2 19531001 19557000 0 0 Deletion 25999 LOC_Os02g32910 retrotransposon protein, putative, unclassified, expressed FN3110-S Chr2 19531001 19557000 0 0 Deletion 25999 LOC_Os02g32920 expressed protein FN3110-S Chr2 19531001 19557000 0 0 Deletion 25999 LOC_Os02g32930 bile acid sodium symporter, putative, expressed FN3110-S Chr2 20427215 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os02g34160 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3110-S Chr2 20445673 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os02g34180 transposon protein, putative, unclassified, expressed FN3110-S Chr2 2086172 C-T 0 0 Single Base Substitution 0 Homo FN3110-S Chr2 21200001 21223000 0 0 Deletion 22999 LOC_Os02g35280 retrotransposon protein, putative, unclassified FN3110-S Chr2 21200001 21223000 0 0 Deletion 22999 LOC_Os02g35290 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3110-S Chr2 22112001 22143000 0 0 Deletion 30999 LOC_Os02g36619 exo70 exocyst complex subunit, putative, expressed FN3110-S Chr2 22112001 22143000 0 0 Deletion 30999 LOC_Os02g36640 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3110-S Chr2 22112001 22143000 0 0 Deletion 30999 LOC_Os02g36650 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3110-S Chr2 22112001 22143000 0 0 Deletion 30999 LOC_Os02g36660 retrotransposon protein, putative, unclassified, expressed FN3110-S Chr2 22112001 22143000 0 0 Deletion 30999 LOC_Os02g36670 expressed protein FN3110-S Chr2 22112001 22143000 0 0 Deletion 30999 LOC_Os02g36680 expressed protein FN3110-S Chr2 24163001 24177000 0 0 Deletion 13999 LOC_Os02g39950 EF hand family protein, putative, expressed FN3110-S Chr2 24163001 24177000 0 0 Deletion 13999 LOC_Os02g39960 exostosin family protein, putative, expressed FN3110-S Chr2 24163001 24177000 0 0 Deletion 13999 LOC_Os02g39970 regulatory subunit, putative, expressed FN3110-S Chr2 24163001 24177000 0 0 Deletion 13999 LOC_Os02g39980 hypothetical protein FN3110-S Chr2 24846001 24861000 0 0 Deletion 14999 LOC_Os02g41470 tRNA synthetases class II domain containing protein, expressed FN3110-S Chr2 26809001 26832000 0 0 Deletion 22999 LOC_Os02g44320 LTPL113 - Protease inhibitor/seed storage/LTP family protein precursor, expressed FN3110-S Chr2 26809001 26832000 0 0 Deletion 22999 LOC_Os02g44330 rho guanine nucleotide exchange factor, putative, expressed FN3110-S Chr2 26809001 26832000 0 0 Deletion 22999 LOC_Os02g44340 expressed protein FN3110-S Chr2 26809001 26832000 0 0 Deletion 22999 LOC_Os02g44350 retrotransposon protein, putative, unclassified, expressed FN3110-S Chr2 27264840 C-T 0 0 Single Base Substitution 0 HET FN3110-S Chr2 27884001 27908000 0 0 Deletion 23999 LOC_Os02g45770 OsMADS6 - MADS-box family gene with MIKCc type-box, expressed FN3110-S Chr2 27884001 27908000 0 0 Deletion 23999 LOC_Os02g45780 zinc finger, C3HC4 type domain containing protein, expressed FN3110-S Chr2 27884001 27908000 0 0 Deletion 23999 LOC_Os02g45790 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3110-S Chr2 27884001 27908000 0 0 Deletion 23999 LOC_Os02g45800 retrotransposon protein, putative, unclassified, expressed FN3110-S Chr2 27884001 27908000 0 0 Deletion 23999 LOC_Os02g45810 WD domain, G-beta repeat domain containing protein, expressed FN3110-S Chr2 3314001 3327000 0 0 Deletion 12999 LOC_Os02g06592 SNF2 family N-terminal domain containing protein, expressed FN3110-S Chr2 3314001 3327000 0 0 Deletion 12999 LOC_Os02g06600 receptor-like protein kinase 2 precursor, putative, expressed FN3110-S Chr2 7842001 7856000 0 0 Deletion 13999 LOC_Os02g14280 transposon protein, putative, unclassified, expressed FN3110-S Chr2 7842001 7856000 0 0 Deletion 13999 LOC_Os02g14290 scramblase, putative, expressed FN3110-S Chr2 7842001 7856000 0 0 Deletion 13999 LOC_Os02g14300 expressed protein FN3110-S Chr2 9034220 9034256 0 0 Insertion 36 HET FN3110-S Chr3 11550001 11567000 0 0 Deletion 16999 LOC_Os03g20420 alpha-N-arabinofuranosidase A, putative, expressed FN3110-S Chr3 11550001 11567000 0 0 Deletion 16999 LOC_Os03g20430 histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH8, putative, expressed FN3110-S Chr3 12987001 13000000 0 0 Deletion 12999 LOC_Os03g22570 MIF4G domain containing protein, putative, expressed FN3110-S Chr3 12987001 13000000 0 0 Deletion 12999 LOC_Os03g22580 CW-type Zinc Finger, putative, expressed FN3110-S Chr3 14479001 14499000 0 0 Deletion 19999 LOC_Os03g25340 peroxidase precursor, putative, expressed FN3110-S Chr3 14479001 14499000 0 0 Deletion 19999 LOC_Os03g25350 LTPL36 - Protease inhibitor/seed storage/LTP family protein precursor, expressed FN3110-S Chr3 14479001 14499000 0 0 Deletion 19999 LOC_Os03g25360 peroxidase precursor, putative, expressed FN3110-S Chr3 15346001 15359000 0 0 Deletion 12999 LOC_Os03g26880 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3110-S Chr3 15346001 15359000 0 0 Deletion 12999 LOC_Os03g26890 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3110-S Chr3 15346001 15359000 0 0 Deletion 12999 LOC_Os03g26900 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3110-S Chr3 16897001 16913000 0 0 Deletion 15999 LOC_Os03g29650 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3110-S Chr3 16897001 16913000 0 0 Deletion 15999 LOC_Os03g29660 retrotransposon protein, putative, unclassified, expressed FN3110-S Chr3 17148001 17169000 0 0 Deletion 20999 LOC_Os03g30070 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3110-S Chr3 17148001 17169000 0 0 Deletion 20999 LOC_Os03g30080 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3110-S Chr3 17148001 17169000 0 0 Deletion 20999 LOC_Os03g30084 expressed protein FN3110-S Chr3 17148001 17169000 0 0 Deletion 20999 LOC_Os03g30088 retrotransposon protein, putative, unclassified FN3110-S Chr3 20003001 20021000 0 0 Deletion 17999 LOC_Os03g36060 hypothetical protein FN3110-S Chr3 20003001 20021000 0 0 Deletion 17999 LOC_Os03g36070 retrotransposon protein, putative, unclassified FN3110-S Chr3 20003001 20021000 0 0 Deletion 17999 LOC_Os03g36080 expressed protein FN3110-S Chr3 20340999 20341000 0 0 Deletion 1 frameshift_variant HET LOC_Os03g36670 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3110-S Chr3 22395633 22395642 0 0 Deletion 9 Homo FN3110-S Chr3 23951001 23965000 0 0 Deletion 13999 LOC_Os03g42950 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3110-S Chr3 23951001 23965000 0 0 Deletion 13999 LOC_Os03g42954 conserved hypothetical protein FN3110-S Chr3 23951001 23965000 0 0 Deletion 13999 LOC_Os03g42960 expressed protein FN3110-S Chr3 23951001 23965000 0 0 Deletion 13999 LOC_Os03g42970 transposon protein, putative, unclassified, expressed FN3110-S Chr3 24081001 24108000 0 0 Deletion 26999 LOC_Os03g43160 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3110-S Chr3 24081001 24108000 0 0 Deletion 26999 LOC_Os03g43169 retrotransposon protein, putative, Ty3-gypsy subclass FN3110-S Chr3 24081001 24108000 0 0 Deletion 26999 LOC_Os03g43180 transposon protein, putative, unclassified, expressed FN3110-S Chr3 24081001 24108000 0 0 Deletion 26999 LOC_Os03g43190 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3110-S Chr3 24081001 24108000 0 0 Deletion 26999 LOC_Os03g43200 retrotransposon protein, putative, unclassified, expressed FN3110-S Chr3 24081001 24108000 0 0 Deletion 26999 LOC_Os03g43210 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3110-S Chr3 24081001 24108000 0 0 Deletion 26999 LOC_Os03g43220 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3110-S Chr3 24081001 24108000 0 0 Deletion 26999 LOC_Os03g43230 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3110-S Chr3 24120517 G-A 0 0 Single Base Substitution 0 HET FN3110-S Chr3 28940329 28940331 0 0 Deletion 2 HET FN3110-S Chr3 32392966 T-A 0 0 Single Base Substitution 0 HET FN3110-S Chr3 32409196 A-T 0 0 Single Base Substitution 0 HET FN3110-S Chr3 32425399 32425404 0 0 Deletion 5 HET FN3110-S Chr4 10244001 10265000 0 0 Deletion 20999 LOC_Os04g18540 hAT dimerisation domain containing protein, putative, expressed FN3110-S Chr4 10244001 10265000 0 0 Deletion 20999 LOC_Os04g18550 expressed protein FN3110-S Chr4 10244001 10265000 0 0 Deletion 20999 LOC_Os04g18559 retrotransposon protein, putative, unclassified FN3110-S Chr4 10244001 10265000 0 0 Deletion 20999 LOC_Os04g18570 retrotransposon protein, putative, unclassified, expressed FN3110-S Chr4 10244001 10265000 0 0 Deletion 20999 LOC_Os04g18580 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3110-S Chr4 10748001 10777000 0 0 Deletion 28999 LOC_Os04g19320 retrotransposon protein, putative, unclassified, expressed FN3110-S Chr4 10748001 10777000 0 0 Deletion 28999 LOC_Os04g19330 retrotransposon protein, putative, unclassified, expressed FN3110-S Chr4 10748001 10777000 0 0 Deletion 28999 LOC_Os04g19340 retrotransposon protein, putative, unclassified, expressed FN3110-S Chr4 10748001 10777000 0 0 Deletion 28999 LOC_Os04g19350 retrotransposon protein, putative, Ty3-gypsy subclass FN3110-S Chr4 10748001 10777000 0 0 Deletion 28999 LOC_Os04g19360 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3110-S Chr4 13053001 13060000 0 0 Deletion 6999 LOC_Os04g22990 retrotransposon protein, putative, unclassified, expressed FN3110-S Chr4 13128001 13166000 0 0 Deletion 37999 LOC_Os04g23100 expressed protein FN3110-S Chr4 13128001 13166000 0 0 Deletion 37999 LOC_Os04g23120 hypothetical protein FN3110-S Chr4 13128001 13166000 0 0 Deletion 37999 LOC_Os04g23130 expressed protein FN3110-S Chr4 13128001 13166000 0 0 Deletion 37999 LOC_Os04g23140 expressed protein FN3110-S Chr4 15956001 15972000 0 0 Deletion 15999 LOC_Os04g26980 terpene synthase, putative, expressed FN3110-S Chr4 15956001 15972000 0 0 Deletion 15999 LOC_Os04g26994 retrotransposon protein, putative, unclassified FN3110-S Chr4 19504688 C-A 0 0 Single Base Substitution 0 HET FN3110-S Chr4 2093001 2120000 0 0 Deletion 26999 LOC_Os04g04400 FAR1 family protein, expressed FN3110-S Chr4 2093001 2120000 0 0 Deletion 26999 LOC_Os04g04410 expressed protein FN3110-S Chr4 2093001 2120000 0 0 Deletion 26999 LOC_Os04g04420 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3110-S Chr4 2093001 2120000 0 0 Deletion 26999 LOC_Os04g04430 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3110-S Chr4 2093001 2120000 0 0 Deletion 26999 LOC_Os04g04440 retrotransposon protein, putative, unclassified FN3110-S Chr4 21832515 21832525 0 0 Deletion 10 HET FN3110-S Chr4 32973431 G-A 0 0 Single Base Substitution 0 HET FN3110-S Chr4 33990829 G-T 0 0 Single Base Substitution 0 HET FN3110-S Chr4 34613001 34641000 0 0 Deletion 27999 LOC_Os04g58120 CRP2 - Cysteine-rich family protein precursor, expressed FN3110-S Chr4 34613001 34641000 0 0 Deletion 27999 LOC_Os04g58130 katanin p80 WD40 repeat-containing subunit B1 homolog 1, putative, expressed FN3110-S Chr4 34613001 34641000 0 0 Deletion 27999 LOC_Os04g58140 elongation factor Tu, putative, expressed FN3110-S Chr4 34613001 34641000 0 0 Deletion 27999 LOC_Os04g58150 transposon protein, putative, unclassified, expressed FN3110-S Chr4 34613001 34641000 0 0 Deletion 27999 LOC_Os04g58160 fiber protein Fb34, putative, expressed FN3110-S Chr4 35084304 T-C 0 0 Single Base Substitution 0 HET FN3110-S Chr4 5191001 5209000 0 0 Deletion 17999 LOC_Os04g09680 caffeic acid 3-O-methyltransferase, putative, expressed FN3110-S Chr4 5191001 5209000 0 0 Deletion 17999 LOC_Os04g09690 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3110-S Chr4 5191001 5209000 0 0 Deletion 17999 LOC_Os04g09700 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3110-S Chr4 5191001 5209000 0 0 Deletion 17999 LOC_Os04g09710 retrotransposon protein, putative, unclassified, expressed FN3110-S Chr4 5191001 5209000 0 0 Deletion 17999 LOC_Os04g09720 OsSCP22 - Putative Serine Carboxypeptidase homologue, expressed FN3110-S Chr4 6530001 6546000 0 0 Deletion 15999 LOC_Os04g11910 transposon protein, putative, unclassified, expressed FN3110-S Chr4 8770001 8813000 0 0 Deletion 42999 LOC_Os04g16150 retrotransposon protein, putative, unclassified, expressed FN3110-S Chr4 8770001 8813000 0 0 Deletion 42999 LOC_Os04g16160 expressed protein FN3110-S Chr4 8770001 8813000 0 0 Deletion 42999 LOC_Os04g16170 retrotransposon protein, putative, unclassified, expressed FN3110-S Chr4 8770001 8813000 0 0 Deletion 42999 LOC_Os04g16180 retrotransposon protein, putative, unclassified FN3110-S Chr4 8770001 8813000 0 0 Deletion 42999 LOC_Os04g16190 retrotransposon protein, putative, unclassified, expressed FN3110-S Chr4 8770001 8813000 0 0 Deletion 42999 LOC_Os04g16200 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3110-S Chr4 8770001 8813000 0 0 Deletion 42999 LOC_Os04g16220 retrotransposon protein, putative, Ty3-gypsy subclass FN3110-S Chr5 10618779 G-C 0 0 Single Base Substitution 0 Homo FN3110-S Chr5 10628001 10672000 0 0 Deletion 43999 LOC_Os05g18400 retrotransposon protein, putative, unclassified FN3110-S Chr5 10628001 10672000 0 0 Deletion 43999 LOC_Os05g18410 retrotransposon protein, putative, Ty1-copia subclass FN3110-S Chr5 10628001 10672000 0 0 Deletion 43999 LOC_Os05g18419 retrotransposon, putative, centromere-specific FN3110-S Chr5 10628001 10672000 0 0 Deletion 43999 LOC_Os05g18446 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3110-S Chr5 11698998 11699012 0 0 Deletion 14 Homo FN3110-S Chr5 12628001 12682000 0 0 Deletion 53999 LOC_Os05g22314 retrotransposon protein, putative, unclassified, expressed FN3110-S Chr5 12628001 12682000 0 0 Deletion 53999 LOC_Os05g22330 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3110-S Chr5 12628001 12682000 0 0 Deletion 53999 LOC_Os05g22340 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3110-S Chr5 12628001 12682000 0 0 Deletion 53999 LOC_Os05g22350 retrotransposon, putative, centromere-specific, expressed FN3110-S Chr5 12628001 12682000 0 0 Deletion 53999 LOC_Os05g22360 hypothetical protein FN3110-S Chr5 12628001 12682000 0 0 Deletion 53999 LOC_Os05g22370 N-acetylglucosaminyl transferase component, putative, expressed FN3110-S Chr5 13039001 13074000 0 0 Deletion 34999 LOC_Os05g22920 digestive organ expansion factor, putative, expressed FN3110-S Chr5 13039001 13074000 0 0 Deletion 34999 LOC_Os05g22930 CAAX amino terminal protease family protein, putative, expressed FN3110-S Chr5 13039001 13074000 0 0 Deletion 34999 LOC_Os05g22940 acetyl-CoA carboxylase, putative, expressed FN3110-S Chr5 13988934 13988935 0 0 Insertion 1 HET FN3110-S Chr5 14103001 14116000 0 0 Deletion 12999 LOC_Os05g24410 retrotransposon protein, putative, unclassified, expressed FN3110-S Chr5 14103001 14116000 0 0 Deletion 12999 LOC_Os05g24420 retrotransposon, putative, centromere-specific, expressed FN3110-S Chr5 14103001 14116000 0 0 Deletion 12999 LOC_Os05g24430 retrotransposon protein, putative, Ty1-copia subclass, expressed FN3110-S Chr5 14103001 14116000 0 0 Deletion 12999 LOC_Os05g24440 retrotransposon protein, putative, unclassified FN3110-S Chr5 14103001 14116000 0 0 Deletion 12999 LOC_Os05g24450 hypothetical protein FN3110-S Chr5 18664001 18683000 0 0 Deletion 18999 LOC_Os05g32030 transposon protein, putative, unclassified, expressed FN3110-S Chr5 18664001 18683000 0 0 Deletion 18999 LOC_Os05g32040 retrotransposon protein, putative, unclassified, expressed FN3110-S Chr5 18664001 18683000 0 0 Deletion 18999 LOC_Os05g32050 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3110-S Chr5 18664001 18683000 0 0 Deletion 18999 LOC_Os05g32060 expressed protein FN3110-S Chr5 19266001 19281000 0 0 Deletion 14999 FN3110-S Chr5 23705001 23717000 0 0 Deletion 11999 LOC_Os05g40340 expressed protein FN3110-S Chr5 23705001 23717000 0 0 Deletion 11999 LOC_Os05g40350 expressed protein FN3110-S Chr5 23705001 23717000 0 0 Deletion 11999 LOC_Os05g40360 expressed protein FN3110-S Chr5 25199001 25213000 0 0 Deletion 13999 LOC_Os05g43330 expressed protein FN3110-S Chr5 25199001 25213000 0 0 Deletion 13999 LOC_Os05g43340 retrotransposon protein, putative, unclassified, expressed FN3110-S Chr5 25199001 25213000 0 0 Deletion 13999 LOC_Os05g43350 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3110-S Chr5 27568869 C-T 0 0 Single Base Substitution 0 HET FN3110-S Chr5 28152863 28152864 0 0 Deletion 1 Homo FN3110-S Chr5 28707701 G-C 0 0 Single Base Substitution 0 Homo FN3110-S Chr5 2937001 2951000 0 0 Deletion 13999 LOC_Os05g05860 retrotransposon protein, putative, unclassified, expressed FN3110-S Chr5 2937001 2951000 0 0 Deletion 13999 LOC_Os05g05870 retrotransposon protein, putative, unclassified FN3110-S Chr5 4532001 4550000 0 0 Deletion 17999 LOC_Os05g08300 retrotransposon protein, putative, unclassified, expressed FN3110-S Chr5 4532001 4550000 0 0 Deletion 17999 LOC_Os05g08310 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3110-S Chr5 4532001 4550000 0 0 Deletion 17999 LOC_Os05g08320 retrotransposon protein, putative, unclassified, expressed FN3110-S Chr5 4532001 4550000 0 0 Deletion 17999 LOC_Os05g08330 hypothetical protein FN3110-S Chr5 4532001 4550000 0 0 Deletion 17999 LOC_Os05g08340 expressed protein FN3110-S Chr5 5121519 5121541 0 0 Deletion 22 Homo FN3110-S Chr5 5176954 T-A 0 0 Single Base Substitution 0 Homo FN3110-S Chr5 5774979 C-A 0 0 Single Base Substitution 0 Homo FN3110-S Chr5 6550001 6586000 0 0 Deletion 35999 LOC_Os05g11580 expressed protein FN3110-S Chr5 6550001 6586000 0 0 Deletion 35999 LOC_Os05g11590 expressed protein FN3110-S Chr5 6550001 6586000 0 0 Deletion 35999 LOC_Os05g11600 expressed protein FN3110-S Chr5 6550001 6586000 0 0 Deletion 35999 LOC_Os05g11610 expressed protein FN3110-S Chr5 6550001 6586000 0 0 Deletion 35999 LOC_Os05g11620 expressed protein FN3110-S Chr5 6681001 6696000 0 0 Deletion 14999 LOC_Os05g11770 ulp1 protease family protein, putative, expressed FN3110-S Chr5 7613903 C-T 0 0 Single Base Substitution 0 STOP_GAINED HET LOC_Os05g13740 retrotransposon protein, putative, unclassified FN3110-S Chr5 7865001 7886000 0 0 Deletion 20999 LOC_Os05g14080 expressed protein FN3110-S Chr5 7865001 7886000 0 0 Deletion 20999 LOC_Os05g14090 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3110-S Chr5 7865001 7886000 0 0 Deletion 20999 LOC_Os05g14100 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3110-S Chr5 7865001 7886000 0 0 Deletion 20999 LOC_Os05g14110 retrotransposon protein, putative, unclassified, expressed FN3110-S Chr5 8677882 8677890 0 0 Deletion 8 Homo FN3110-S Chr5 9710001 9750000 0 0 Deletion 39999 LOC_Os05g17010 retrotransposon protein, putative, unclassified, expressed FN3110-S Chr5 9710001 9750000 0 0 Deletion 39999 LOC_Os05g17020 expressed protein FN3110-S Chr5 9710001 9750000 0 0 Deletion 39999 LOC_Os05g17030 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3110-S Chr5 9710001 9750000 0 0 Deletion 39999 LOC_Os05g17040 retrotransposon protein, putative, unclassified, expressed FN3110-S Chr5 9710001 9750000 0 0 Deletion 39999 LOC_Os05g17050 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3110-S Chr5 9710001 9750000 0 0 Deletion 39999 LOC_Os05g17060 retrotransposon protein, putative, unclassified, expressed FN3110-S Chr5 9710001 9750000 0 0 Deletion 39999 LOC_Os05g17070 retrotransposon protein, putative, unclassified FN3110-S Chr5 9783001 9798000 0 0 Deletion 14999 LOC_Os05g17120 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3110-S Chr6 11857208 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os06g20600 retrotransposon protein, putative, unclassified FN3110-S Chr6 12889001 12902000 0 0 Deletion 12999 LOC_Os06g22220 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3110-S Chr6 12889001 12902000 0 0 Deletion 12999 LOC_Os06g22230 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3110-S Chr6 13253001 13269000 0 0 Deletion 15999 LOC_Os06g22770 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3110-S Chr6 13253001 13269000 0 0 Deletion 15999 LOC_Os06g22780 retrotransposon protein, putative, Ty3-gypsy subclass FN3110-S Chr6 13253001 13269000 0 0 Deletion 15999 LOC_Os06g22790 retrotransposon protein, putative, unclassified, expressed FN3110-S Chr6 14124001 14156000 0 0 Deletion 31999 LOC_Os06g24150 retrotransposon protein, putative, Ty3-gypsy subclass FN3110-S Chr6 14124001 14156000 0 0 Deletion 31999 LOC_Os06g24160 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3110-S Chr6 14124001 14156000 0 0 Deletion 31999 LOC_Os06g24170 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3110-S Chr6 14124001 14156000 0 0 Deletion 31999 LOC_Os06g24180 cytochrome P450 84A1, putative, expressed FN3110-S Chr6 14302001 14339000 0 0 Deletion 36999 LOC_Os06g24420 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3110-S Chr6 14302001 14339000 0 0 Deletion 36999 LOC_Os06g24430 expressed protein FN3110-S Chr6 14302001 14339000 0 0 Deletion 36999 LOC_Os06g24440 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3110-S Chr6 14302001 14339000 0 0 Deletion 36999 LOC_Os06g24450 retrotransposon protein, putative, Ty1-copia subclass, expressed FN3110-S Chr6 14302001 14339000 0 0 Deletion 36999 LOC_Os06g24460 pleiotropic drug resistance protein 2, putative, expressed FN3110-S Chr6 14302001 14339000 0 0 Deletion 36999 LOC_Os06g24470 expressed protein FN3110-S Chr6 17320001 17335000 0 0 Deletion 14999 LOC_Os06g30070 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3110-S Chr6 17320001 17335000 0 0 Deletion 14999 LOC_Os06g30080 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3110-S Chr6 1863588 G-A 0 0 Single Base Substitution 0 Homo FN3110-S Chr6 20331001 20357000 0 0 Deletion 25999 LOC_Os06g34960 TKL_IRAK_DUF26.1 - DUF26 kinases have homology to DUF26 containing loci, expressed FN3110-S Chr6 20331001 20357000 0 0 Deletion 25999 LOC_Os06g34970 expressed protein FN3110-S Chr6 20331001 20357000 0 0 Deletion 25999 LOC_Os06g34980 retrotransposon, putative, centromere-specific FN3110-S Chr6 20331001 20357000 0 0 Deletion 25999 LOC_Os06g34990 cytochrome P450 71A6, putative, expressed FN3110-S Chr6 20331001 20357000 0 0 Deletion 25999 LOC_Os06g35000 retrotransposon, putative, centromere-specific, expressed FN3110-S Chr6 22167001 22187000 0 0 Deletion 19999 LOC_Os06g37470 retrotransposon protein, putative, unclassified, expressed FN3110-S Chr6 22167001 22187000 0 0 Deletion 19999 LOC_Os06g37480 retrotransposon protein, putative, unclassified, expressed FN3110-S Chr6 22167001 22187000 0 0 Deletion 19999 LOC_Os06g37490 expressed protein FN3110-S Chr6 22192229 22192405 0 0 Inversion 0 LOC_Os06g37500 cytokinin dehydrogenase precursor, putative, expressed FN3110-S Chr6 23455608 23455742 0 0 Deletion 134 HET FN3110-S Chr6 24641001 24662000 0 0 Deletion 20999 LOC_Os06g41190 retrotransposon protein, putative, Ty1-copia subclass, expressed FN3110-S Chr6 24641001 24662000 0 0 Deletion 20999 LOC_Os06g41200 retrotransposon protein, putative, Ty1-copia subclass, expressed FN3110-S Chr6 2747001 2755000 0 0 Deletion 7999 LOC_Os06g05980 transporter family protein, putative, expressed FN3110-S Chr6 2747001 2755000 0 0 Deletion 7999 LOC_Os06g05990 zinc finger family protein, putative, expressed FN3110-S Chr6 28758001 28781000 0 0 Deletion 22999 LOC_Os06g47480 expressed protein FN3110-S Chr6 28758001 28781000 0 0 Deletion 22999 LOC_Os06g47490 expressed protein FN3110-S Chr6 28758001 28781000 0 0 Deletion 22999 LOC_Os06g47500 retrotransposon protein, putative, Ty3-gypsy subclass FN3110-S Chr6 28758001 28781000 0 0 Deletion 22999 LOC_Os06g47510 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3110-S Chr6 28758001 28781000 0 0 Deletion 22999 LOC_Os06g47520 expressed protein FN3110-S Chr6 28758001 28781000 0 0 Deletion 22999 LOC_Os06g47530 TKL_IRAK_DUF26-lh.6 - DUF26 kinases have homology to DUF26 containing loci, expressed FN3110-S Chr6 28758001 28781000 0 0 Deletion 22999 LOC_Os06g47540 expressed protein FN3110-S Chr6 3721001 3757000 0 0 Deletion 35999 LOC_Os06g07690 expressed protein FN3110-S Chr6 3721001 3757000 0 0 Deletion 35999 LOC_Os06g07700 expressed protein FN3110-S Chr6 3721001 3757000 0 0 Deletion 35999 LOC_Os06g07710 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3110-S Chr6 3721001 3757000 0 0 Deletion 35999 LOC_Os06g07720 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3110-S Chr6 3721001 3757000 0 0 Deletion 35999 LOC_Os06g07730 retrotransposon protein, putative, unclassified, expressed FN3110-S Chr6 3721001 3757000 0 0 Deletion 35999 LOC_Os06g07740 myb-like DNA-binding domain, SHAQKYF class family protein, expressed FN3110-S Chr6 3721001 3757000 0 0 Deletion 35999 LOC_Os06g07750 expressed protein FN3110-S Chr6 5637001 5652000 0 0 Deletion 14999 LOC_Os06g10800 zinc finger family protein, putative, expressed FN3110-S Chr6 5637001 5652000 0 0 Deletion 14999 LOC_Os06g10810 phosphate carrier protein, mitochondrial precursor, putative, expressed FN3110-S Chr6 5637001 5652000 0 0 Deletion 14999 LOC_Os06g10820 helix-loop-helix DNA-binding domain containing protein, expressed FN3110-S Chr6 5637001 5652000 0 0 Deletion 14999 LOC_Os06g10830 retrotransposon protein, putative, unclassified, expressed FN3110-S Chr6 7464069 A-G 0 0 Single Base Substitution 0 HET FN3110-S Chr6 8079001 8092000 0 0 Deletion 12999 FN3110-S Chr7 16232001 16243000 0 0 Deletion 10999 LOC_Os07g27820 retrotransposon protein, putative, unclassified, expressed FN3110-S Chr7 16232001 16243000 0 0 Deletion 10999 LOC_Os07g27834 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3110-S Chr7 17352001 17378000 0 0 Deletion 25999 LOC_Os07g29550 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3110-S Chr7 17352001 17378000 0 0 Deletion 25999 LOC_Os07g29560 expressed protein FN3110-S Chr7 17352001 17378000 0 0 Deletion 25999 LOC_Os07g29570 retrotransposon protein, putative, unclassified, expressed FN3110-S Chr7 17352001 17378000 0 0 Deletion 25999 LOC_Os07g29580 expressed protein FN3110-S Chr7 19142200 19142202 0 0 Insertion 2 frameshift_variant HET LOC_Os07g32220 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3110-S Chr7 19258618 19258620 0 0 Deletion 2 HET FN3110-S Chr7 21161001 21178000 0 0 Deletion 16999 LOC_Os07g35380 TKL_IRAK_DUF26-lc.16 - DUF26 kinases have homology to DUF26 containing loci, expressed FN3110-S Chr7 21161001 21178000 0 0 Deletion 16999 LOC_Os07g35390 TKL_IRAK_DUF26-lc.17 - DUF26 kinases have homology to DUF26 containing loci, expressed FN3110-S Chr7 21161001 21178000 0 0 Deletion 16999 LOC_Os07g35400 expressed protein FN3110-S Chr7 21161001 21178000 0 0 Deletion 16999 LOC_Os07g35410 TKL_IRAK_DUF26-lc.18 - DUF26 kinases have homology to DUF26 containing loci, expressed FN3110-S Chr7 26889001 26906000 0 0 Deletion 16999 LOC_Os07g45064 Phosphatidylinositol kinase and FAT containing domain protein, putative, expressed FN3110-S Chr7 26889001 26906000 0 0 Deletion 16999 LOC_Os07g45070 FAT domain-containing protein, putative, expressed FN3110-S Chr7 26889001 26906000 0 0 Deletion 16999 LOC_Os07g45074 FAT domain-containing protein, putative, expressed FN3110-S Chr7 29574762 29574774 0 0 Deletion 12 HET FN3110-S Chr7 5027001 5063000 0 0 Deletion 35999 LOC_Os07g09520 expressed protein FN3110-S Chr7 5027001 5063000 0 0 Deletion 35999 LOC_Os07g09530 ankyrin repeat family protein, putative, expressed FN3110-S Chr7 5027001 5063000 0 0 Deletion 35999 LOC_Os07g09540 transposon protein, putative, CACTA, En/Spm sub-class FN3110-S Chr7 5027001 5063000 0 0 Deletion 35999 LOC_Os07g09560 ankyrin repeat family protein, putative, expressed FN3110-S Chr7 8174001 8186000 0 0 Deletion 11999 LOC_Os07g14320 retrotransposon protein, putative, unclassified FN3110-S Chr7 8174001 8186000 0 0 Deletion 11999 LOC_Os07g14330 expressed protein FN3110-S Chr7 8591001 8620000 0 0 Deletion 28999 LOC_Os07g14970 retrotransposon protein, putative, unclassified, expressed FN3110-S Chr7 8591001 8620000 0 0 Deletion 28999 LOC_Os07g14980 retrotransposon protein, putative, unclassified FN3110-S Chr7 8591001 8620000 0 0 Deletion 28999 LOC_Os07g14990 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3110-S Chr7 8591001 8620000 0 0 Deletion 28999 LOC_Os07g15000 expressed protein FN3110-S Chr7 8591001 8620000 0 0 Deletion 28999 LOC_Os07g15010 hypothetical protein FN3110-S Chr7 8591001 8620000 0 0 Deletion 28999 LOC_Os07g15020 expressed protein FN3110-S Chr7 8591001 8620000 0 0 Deletion 28999 LOC_Os07g15030 retrotransposon protein, putative, unclassified, expressed FN3110-S Chr7 9373001 9393000 0 0 Deletion 19999 LOC_Os07g16080 retrotransposon protein, putative, unclassified, expressed FN3110-S Chr7 9373001 9393000 0 0 Deletion 19999 LOC_Os07g16090 retrotransposon protein, putative, unclassified FN3110-S Chr7 9373001 9393000 0 0 Deletion 19999 LOC_Os07g16100 retrotransposon protein, putative, unclassified FN3110-S Chr7 9373001 9393000 0 0 Deletion 19999 LOC_Os07g16110 retrotransposon protein, putative, Ty3-gypsy subclass FN3110-S Chr7 9373001 9393000 0 0 Deletion 19999 LOC_Os07g16120 retrotransposon protein, putative, unclassified, expressed FN3110-S Chr8 10686992 10686994 0 0 Insertion 2 HET FN3110-S Chr8 13359081 13359083 0 0 Insertion 2 HET FN3110-S Chr8 17451001 17476000 0 0 Deletion 24999 LOC_Os08g28570 resistance protein, putative, expressed FN3110-S Chr8 17451001 17476000 0 0 Deletion 24999 LOC_Os08g28580 hypothetical protein FN3110-S Chr8 17451001 17476000 0 0 Deletion 24999 LOC_Os08g28590 transposon protein, putative, CACTA, En/Spm sub-class FN3110-S Chr8 17451001 17476000 0 0 Deletion 24999 LOC_Os08g28600 resistance protein, putative, expressed FN3110-S Chr8 18643001 18673000 0 0 Deletion 29999 LOC_Os08g30310 transposon protein, putative, CACTA, En/Spm sub-class FN3110-S Chr8 18643001 18673000 0 0 Deletion 29999 LOC_Os08g30320 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3110-S Chr8 18643001 18673000 0 0 Deletion 29999 LOC_Os08g30330 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3110-S Chr8 18838001 18869000 0 0 Deletion 30999 LOC_Os08g30590 C1-like domain containing protein, expressed FN3110-S Chr8 18838001 18869000 0 0 Deletion 30999 LOC_Os08g30600 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3110-S Chr8 18838001 18869000 0 0 Deletion 30999 LOC_Os08g30610 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3110-S Chr8 20705001 20723000 0 0 Deletion 17999 LOC_Os08g33220 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3110-S Chr8 20705001 20723000 0 0 Deletion 17999 LOC_Os08g33230 retrotransposon protein, putative, Ty3-gypsy subclass FN3110-S Chr8 20705001 20723000 0 0 Deletion 17999 LOC_Os08g33240 retrotransposon protein, putative, unclassified FN3110-S Chr8 20705001 20723000 0 0 Deletion 17999 LOC_Os08g33250 retrotransposon protein, putative, unclassified, expressed FN3110-S Chr8 20705001 20723000 0 0 Deletion 17999 LOC_Os08g33260 expressed protein FN3110-S Chr8 21366001 21392000 0 0 Deletion 25999 LOC_Os08g34080 retrotransposon protein, putative, unclassified, expressed FN3110-S Chr8 21366001 21392000 0 0 Deletion 25999 LOC_Os08g34090 retrotransposon protein, putative, unclassified, expressed FN3110-S Chr8 21366001 21392000 0 0 Deletion 25999 LOC_Os08g34100 conserved hypothetical protein FN3110-S Chr8 21366001 21392000 0 0 Deletion 25999 LOC_Os08g34110 retrotransposon protein, putative, Ty1-copia subclass, expressed FN3110-S Chr8 2247001 2261000 0 0 Deletion 13999 LOC_Os08g04540 decarboxylase, putative, expressed FN3110-S Chr8 22941001 22961000 0 0 Deletion 19999 FN3110-S Chr8 23124001 23145000 0 0 Deletion 20999 LOC_Os08g36640 expressed protein FN3110-S Chr8 23124001 23145000 0 0 Deletion 20999 LOC_Os08g36650 retrotransposon protein, putative, unclassified, expressed FN3110-S Chr8 23124001 23145000 0 0 Deletion 20999 LOC_Os08g36660 expressed protein FN3110-S Chr8 23124001 23145000 0 0 Deletion 20999 LOC_Os08g36670 transposon protein, putative, unclassified, expressed FN3110-S Chr8 24728001 24752000 0 0 Deletion 23999 LOC_Os08g39150 expressed protein FN3110-S Chr8 24728001 24752000 0 0 Deletion 23999 LOC_Os08g39160 formyl transferase, putative, expressed FN3110-S Chr8 24728001 24752000 0 0 Deletion 23999 LOC_Os08g39170 expressed protein FN3110-S Chr8 24728001 24752000 0 0 Deletion 23999 LOC_Os08g39174 retrotransposon protein, putative, Ty1-copia subclass, expressed FN3110-S Chr8 24728001 24752000 0 0 Deletion 23999 LOC_Os08g39180 OsWAK73 - OsWAK receptor-like protein kinase, expressed FN3110-S Chr8 6785001 6805000 0 0 Deletion 19999 LOC_Os08g11590 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3110-S Chr8 6785001 6805000 0 0 Deletion 19999 LOC_Os08g11599 expressed protein FN3110-S Chr8 804001 822000 0 0 Deletion 17999 LOC_Os08g02270 hypothetical protein FN3110-S Chr8 804001 822000 0 0 Deletion 17999 LOC_Os08g02280 hypothetical protein FN3110-S Chr8 909001 928000 0 0 Deletion 18999 LOC_Os08g02350 expressed protein FN3110-S Chr8 909001 928000 0 0 Deletion 18999 LOC_Os08g02354 expressed protein FN3110-S Chr8 9577001 9585000 0 0 Deletion 7999 FN3110-S Chr9 10190723 C-T 0 0 Single Base Substitution 0 STOP_GAINED HET LOC_Os09g16600 expressed protein FN3110-S Chr9 1082001 1104000 0 0 Deletion 21999 FN3110-S Chr9 11016001 11058000 0 0 Deletion 41999 LOC_Os09g18000 senescence-induced receptor-like serine/threonine-protein kinase precursor, putative, expressed FN3110-S Chr9 11016001 11058000 0 0 Deletion 41999 LOC_Os09g18010 expressed protein FN3110-S Chr9 11016001 11058000 0 0 Deletion 41999 LOC_Os09g18020 senescence-induced receptor-like serine/threonine-protein kinase precursor, putative, expressed FN3110-S Chr9 1198001 1211000 0 0 Deletion 12999 LOC_Os09g02690 expressed protein FN3110-S Chr9 13040001 13052000 0 0 Deletion 11999 LOC_Os09g21560 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3110-S Chr9 13040001 13052000 0 0 Deletion 11999 LOC_Os09g21570 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3110-S Chr9 14829726 14829728 0 0 Deletion 2 HET FN3110-S Chr9 19095800 19095822 0 0 Insertion 22 HET FN3110-S Chr9 21652681 21652688 0 0 Deletion 7 HET FN3110-S Chr9 2201001 2220000 0 0 Deletion 18999 LOC_Os09g04190 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3110-S Chr9 2201001 2220000 0 0 Deletion 18999 LOC_Os09g04200 transposon protein, putative, CACTA, En/Spm sub-class FN3110-S Chr9 2201001 2220000 0 0 Deletion 18999 LOC_Os09g04210 hydrolase/ zinc ion binding protein, putative, expressed FN3110-S Chr9 4312001 4329000 0 0 Deletion 16999 LOC_Os09g08340 retrotransposon protein, putative, unclassified, expressed FN3110-S Chr9 4312001 4329000 0 0 Deletion 16999 LOC_Os09g08350 retrotransposon protein, putative, unclassified, expressed FN3110-S Chr9 4761001 4792000 0 0 Deletion 30999 LOC_Os09g08960 retrotransposon protein, putative, unclassified, expressed FN3110-S Chr9 4761001 4792000 0 0 Deletion 30999 LOC_Os09g08970 expressed protein FN3110-S Chr9 4761001 4792000 0 0 Deletion 30999 LOC_Os09g08980 retrotransposon protein, putative, unclassified FN3110-S Chr9 4761001 4792000 0 0 Deletion 30999 LOC_Os09g08990 cytochrome P450, putative, expressed FN3110-S Chr9 4761001 4792000 0 0 Deletion 30999 LOC_Os09g09000 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3110-S Chr9 5477001 5493000 0 0 Deletion 15999 LOC_Os09g10054 disease resistance protein RPS2, putative, expressed FN3110-S Chr9 5477001 5493000 0 0 Deletion 15999 LOC_Os09g10080 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3110-S Chr9 604001 621000 0 0 Deletion 16999 LOC_Os09g01900 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3110-S Chr9 604001 621000 0 0 Deletion 16999 LOC_Os09g01910 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3110-S Chr9 8735001 8759000 0 0 Deletion 23999 LOC_Os09g14710 retrotransposon protein, putative, unclassified, expressed FN3110-S Chr9 8735001 8759000 0 0 Deletion 23999 LOC_Os09g14720 retrotransposon protein, putative, unclassified, expressed FN3110-S Chr9 8735001 8759000 0 0 Deletion 23999 LOC_Os09g14730 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3110-S Chr9 8735001 8759000 0 0 Deletion 23999 LOC_Os09g14740 retrotransposon protein, putative, unclassified, expressed FN3110-S Chr9 8996001 9007000 0 0 Deletion 10999 LOC_Os09g14990 retrotransposon protein, putative, Ty1-copia subclass, expressed