FN3129-S Chr1 1259504 1259923 0 0 Deletion 419 upstream_gene_variant HET FN3129-S Chr1 19171498 T-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3129-S Chr1 21673211 C-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3129-S Chr1 24563964 A-G 0 0 Single Base Substitution 0 INTRON HET FN3129-S Chr1 30467802 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN3129-S Chr1 31311517 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os01g54420 dynamin family protein, putative, expressed FN3129-S Chr1 31954509 31954512 0 0 Deletion 3 downstream_gene_variant HET FN3129-S Chr1 37051310 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN3129-S Chr10 11844458 11844458 0 0 Insertion 1 upstream_gene_variant HET FN3129-S Chr10 14797291 14797302 0 0 Deletion 11 upstream_gene_variant HET FN3129-S Chr10 17461092 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN3129-S Chr10 17619515 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os10g33460 alcohol oxidase, putative, expressed FN3129-S Chr10 17619526 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os10g33460 alcohol oxidase, putative, expressed FN3129-S Chr10 22550420 Chr1 2473716 0 Translocation 0 FN3129-S Chr10 5412334 5412334 0 0 Insertion 1 upstream_gene_variant HET FN3129-S Chr10 8748930 8748931 0 0 Deletion 1 frameshift_variant HET LOC_Os10g17360 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3129-S Chr10 9660742 9660746 0 0 Deletion 4 upstream_gene_variant HET FN3129-S Chr11 12533012 12533013 0 0 Deletion 1 intergenic_region HET FN3129-S Chr11 13397516 Chr2 2470221 0 Translocation 0 FN3129-S Chr11 16654678 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN3129-S Chr11 20263500 20263506 0 0 Deletion 6 INTERGENIC HOMO FN3129-S Chr11 25063526 25063576 0 0 Deletion 50 upstream_gene_variant HET FN3129-S Chr11 25383038 G-A 0 0 Single Base Substitution 0 INTRON HOMO FN3129-S Chr11 26147165 26147165 0 0 Insertion 1 upstream_gene_variant HET FN3129-S Chr11 26960166 Chr5 27709523 0 Translocation 0 LOC_Os11g44590 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3129-S Chr11 3655572 Chr1 35235637 0 Translocation 0 FN3129-S Chr11 8689441 8689533 0 0 Deletion 92 upstream_gene_variant HET FN3129-S Chr12 14518922 14518922 0 0 Insertion 1 upstream_gene_variant HET FN3129-S Chr12 14915973 G-A 0 0 Single Base Substitution 0 INTRON HET FN3129-S Chr12 26542753 26542754 0 0 Deletion 1 downstream_gene_variant HET FN3129-S Chr2 10331673 10331685 0 0 Deletion 12 intron_variant HET FN3129-S Chr2 17151179 G-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN3129-S Chr2 17551991 17551991 0 0 Insertion 1 intergenic_region HET FN3129-S Chr2 20282309 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN3129-S Chr2 30240549 30240550 0 0 Deletion 1 upstream_gene_variant HET FN3129-S Chr2 5808896 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN3129-S Chr3 29962688 G-A 0 0 Single Base Substitution 0 INTRON HET FN3129-S Chr3 337641 A-T 0 0 Single Base Substitution 0 INTRON HOMO FN3129-S Chr3 34345407 C-T 0 0 Single Base Substitution 0 INTRON HET FN3129-S Chr4 11945405 11945406 0 0 Deletion 1 intron_variant HET FN3129-S Chr4 1214492 G-A 0 0 Single Base Substitution 0 INTRON HET FN3129-S Chr4 15266164 15266164 0 0 Insertion 1 upstream_gene_variant HET FN3129-S Chr4 18479384 18479385 0 0 Deletion 1 INTERGENIC HET FN3129-S Chr4 25587586 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g43250 retrotransposon protein, putative, unclassified, expressed FN3129-S Chr4 2627645 2627646 0 0 Deletion 1 upstream_gene_variant HET FN3129-S Chr4 27821386 A-C 0 0 Single Base Substitution 0 INTRON HET FN3129-S Chr4 32523044 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN3129-S Chr4 32912475 32912475 0 0 Insertion 1 upstream_gene_variant HET FN3129-S Chr4 33803295 Chr1 34719682 0 Translocation 0 FN3129-S Chr4 4853057 4853143 0 0 Deletion 86 intergenic_region HET FN3129-S Chr4 8158805 8158806 0 0 Deletion 1 intron_variant HET FN3129-S Chr5 10007414 10007414 0 0 Insertion 1 upstream_gene_variant HET FN3129-S Chr5 15242374 15242375 0 0 Deletion 1 upstream_gene_variant HET FN3129-S Chr5 16655202 T-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3129-S Chr5 17434756 A-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3129-S Chr5 21626190 21626191 0 0 Deletion 1 upstream_gene_variant HET FN3129-S Chr5 28982946 28982948 0 0 Deletion 2 INTERGENIC HOMO FN3129-S Chr5 8695387 Chr4 20317846 0 Translocation 0 LOC_Os05g15360 expressed protein FN3129-S Chr6 17273608 C-T 0 0 Single Base Substitution 0 INTRON HET FN3129-S Chr6 17534062 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN3129-S Chr6 20462834 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN3129-S Chr6 4304251 4304259 0 0 Deletion 8 INTERGENIC HET FN3129-S Chr6 6168588 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN3129-S Chr6 9599772 9599773 0 0 Deletion 1 downstream_gene_variant HET FN3129-S Chr7 12154985 12154986 0 0 Deletion 1 intergenic_region HET FN3129-S Chr7 14189955 14189956 0 0 Deletion 1 downstream_gene_variant HET FN3129-S Chr7 20515939 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3129-S Chr7 23404504 23404505 0 0 Deletion 1 upstream_gene_variant HET FN3129-S Chr7 7281586 7281647 0 0 Deletion 61 downstream_gene_variant HET FN3129-S Chr7 885040 885074 0 0 Deletion 34 upstream_gene_variant HET FN3129-S Chr8 14820167 14820232 0 0 Deletion 65 frameshift_variant HET LOC_Os08g24540 retrotransposon protein, putative, unclassified FN3129-S Chr8 17964425 17964451 0 0 Deletion 26 upstream_gene_variant HET FN3129-S Chr8 24138366 24138366 0 0 Insertion 1 frameshift_variant HET LOC_Os08g38100 LTPL131 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed FN3129-S Chr8 27143959 27143961 0 0 Deletion 2 INTRON HOMO FN3129-S Chr8 28390844 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os08g45210 Mpv17 / PMP22 family domain containing protein, expressed FN3129-S Chr8 6761169 Chr5 8422521 0 Translocation 0 FN3129-S Chr8 6843935 6843935 0 0 Insertion 1 5_prime_UTR_variant HET FN3129-S Chr8 8561243 Chr1 14847279 0 Translocation 0 LOC_Os08g14290 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3129-S Chr9 11379209 Chr6 7774338 0 Translocation 0 FN3129-S Chr9 1567425 T-G 0 0 Single Base Substitution 0 INTERGENIC HET FN3129-S Chr9 5748486 5748486 0 0 Insertion 1 upstream_gene_variant HET FN3129-S Chr9 8046391 A-C 0 0 Single Base Substitution 0 INTRON HOMO FN3129-S Chr9 9371551 Chr7 4204682 0 Translocation 0